RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 FBXO16Q8IX29 292 aaPredicted RBP11□□□□□ -0.65
CDCA3-204ENST00000535406 STAG2Q8N3U4 1231 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 FERMT2Q96AC1 680 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 PURBQ96QR8 312 aaKnown RBP11□□□□□ -0.65
CDCA3-204ENST00000535406 JMJD4Q9H9V9 463 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 SPC25Q9HBM1 224 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 RBM27Q9P2N5 1060 aaKnown RBP11□□□□□ -0.65
CDCA3-204ENST00000535406 MAD2L2Q9UI95 211 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 PHF24Q9UPV7 400 aa11□□□□□ -0.65
CDCA3-204ENST00000535406 A0A1W2PQ45 241 aaPredicted RBP10.99□□□□□ -0.65
CDCA3-204ENST00000535406 A0A1W2PQY0 241 aa10.99□□□□□ -0.65
CDCA3-204ENST00000535406 C6orf222P0C671 652 aaPredicted RBP10.99□□□□□ -0.65
CDCA3-204ENST00000535406 CST5P28325 142 aaPredicted RBP10.99□□□□□ -0.65
CDCA3-204ENST00000535406 MCM5P33992 734 aa10.99□□□□□ -0.65
CDCA3-204ENST00000535406 RPS6P62753 249 aaKnown RBP10.99□□□□□ -0.65
CDCA3-204ENST00000535406 GRM4Q14833 912 aa10.99□□□□□ -0.65
CDCA3-204ENST00000535406 SNX17Q15036 470 aa10.99□□□□□ -0.65
CDCA3-204ENST00000535406 RNF20Q5VTR2 975 aa10.99□□□□□ -0.65
CDCA3-204ENST00000535406 NOL8Q76FK4 1167 aaKnown RBP10.99□□□□□ -0.65
CDCA3-204ENST00000535406 EEPD1Q7L9B9 569 aa10.99□□□□□ -0.65
CDCA3-204ENST00000535406 CATIPQ7Z7H3 387 aa10.99□□□□□ -0.65
CDCA3-204ENST00000535406 FBXO11Q86XK2 927 aa10.99□□□□□ -0.65
CDCA3-204ENST00000535406 MPHOSPH6Q99547 160 aaKnown RBP10.99□□□□□ -0.65
CDCA3-204ENST00000535406 TSEN34Q9BSV6 310 aaKnown RBP10.99□□□□□ -0.65
CDCA3-204ENST00000535406 SENP2Q9HC62 589 aa10.99□□□□□ -0.65
CDCA3-204ENST00000535406 VAT1LQ9HCJ6 419 aa10.99□□□□□ -0.65
CDCA3-204ENST00000535406 VTA1Q9NP79 307 aa10.99□□□□□ -0.65
CDCA3-204ENST00000535406 ATP11BQ9Y2G3 1177 aa10.99□□□□□ -0.65
CDCA3-204ENST00000535406 FARP1Q9Y4F1 1045 aaPredicted RBP10.99□□□□□ -0.65
CDCA3-204ENST00000535406 DDX49Q9Y6V7 483 aaKnown RBP10.99□□□□□ -0.65
CDCA3-204ENST00000535406 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.98□□□□□ -0.65
CDCA3-204ENST00000535406 PALM3A6NDB9 673 aaPredicted RBP10.98□□□□□ -0.65
CDCA3-204ENST00000535406 MYADML2A6NDP7 307 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 MOXD2PA6NHM9 499 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 ZBTB5O15062 677 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 PRC1O43663 620 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 ACLYP53396 1101 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 GJA9P57773 515 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 TNFAIP2Q03169 654 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 TROAPQ12815 778 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 NECTIN1Q15223 517 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 TRIM60Q495X7 471 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 C1orf53Q5VUE5 145 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 TLK2Q86UE8 772 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 HOMER1Q86YM7 354 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 MCF2L2Q86YR7 1114 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 ZNF579Q8NAF0 562 aaKnown RBP10.98□□□□□ -0.65
CDCA3-204ENST00000535406 PCSK9Q8NBP7 692 aaKnown RBP10.98□□□□□ -0.65
CDCA3-204ENST00000535406 RGS22Q8NE09 1264 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 KLHDC9Q8NEP7 349 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 DNERQ8NFT8 737 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 IGDCC4Q8TDY8 1250 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 MORC4Q8TE76 937 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 NUP133Q8WUM0 1156 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 TMEM87BQ96K49 555 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 MTA3Q9BTC8 594 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 AMNQ9BXJ7 453 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 MAF1Q9H063 256 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 UPF3AQ9H1J1 476 aaKnown RBP10.98□□□□□ -0.65
CDCA3-204ENST00000535406 PRO3102Q9H379 93 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 LY9Q9HBG7 655 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 STARD7Q9NQZ5 370 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 PRKAG2Q9UGJ0 569 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 MRPL11Q9Y3B7 192 aaKnown RBP10.98□□□□□ -0.65
CDCA3-204ENST00000535406 TRIOBPQ9H2D6 2365 aa10.98□□□□□ -0.65
CDCA3-204ENST00000535406 LTBP2Q14767 1821 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 A0A1W2PPC1 479 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 B4DLN1 442 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 SH2B2O14492 632 aaPredicted RBP10.97□□□□□ -0.65
CDCA3-204ENST00000535406 DDAH1O94760 285 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 SLC34A2O95436 690 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 MAGEA10P43363 369 aaPredicted RBP10.97□□□□□ -0.65
CDCA3-204ENST00000535406 MRPL12P52815 198 aaKnown RBP10.97□□□□□ -0.65
CDCA3-204ENST00000535406 PDE4DQ08499 809 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 KCNA10Q16322 511 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 CCSAPQ6IQ19 270 aaPredicted RBP10.97□□□□□ -0.65
CDCA3-204ENST00000535406 TAPT1Q6NXT6 567 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 NFXL1Q6ZNB6 911 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 ZNF654Q8IZM8 581 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 CTCFLQ8NI51 663 aaPredicted RBP10.97□□□□□ -0.65
CDCA3-204ENST00000535406 KCNV2Q8TDN2 545 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 MTMR8Q96EF0 704 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 GDF15Q99988 308 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 PRDM5Q9NQX1 630 aaPredicted RBP10.97□□□□□ -0.65
CDCA3-204ENST00000535406 PDGFCQ9NRA1 345 aa10.97□□□□□ -0.65
CDCA3-204ENST00000535406 GNEQ9Y223 722 aaKnown RBP10.97□□□□□ -0.65
CDCA3-204ENST00000535406 CCDC69A6NI79 296 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 ASGR1P07306 291 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 SMPD1P17405 629 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 EDNRBP24530 442 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 KIF5BP33176 963 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 BMP8BP34820 402 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 FXR1P51114 621 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDCA3-204ENST00000535406 IRX5P78411 483 aaPredicted RBP10.96□□□□□ -0.65
CDCA3-204ENST00000535406 GNASQ5JWF2 1037 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 IQSEC1Q6DN90 963 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 GLT1D1Q96MS3 346 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 PIGSQ96S52 555 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 MAP3K14Q99558 947 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 LBHD1Q9BQE6 289 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms