RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 BBOF1Q8ND07 529 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 IL17REQ8NFR9 667 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 DPH5Q9H2P9 285 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 QTRT2Q9H974 415 aaKnown RBP19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 ZNF148Q9UQR1 794 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 SYMPKQ92797 1274 aaKnown RBP19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 LMBRD1Q9NUN5 540 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 ARHGAP42A6NI28 874 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 ARHGAP4P98171 946 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 PTGDRQ13258 359 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 RSRC2Q7L4I2 434 aaKnown RBP19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 ADD3Q9UEY8 706 aaKnown RBP19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 PCDHB4Q9Y5E5 795 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 PDE8BO95263 885 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 SUPT20HL1Q3ZLR7 823 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 SLC7A3Q8WY07 619 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 CDKL2Q92772 493 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 MAD1L1Q9Y6D9 718 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 ADCY9O60503 1353 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 PHKA1P46020 1223 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 RNF10Q8N5U6 811 aaKnown RBP19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 NT5C1BQ96P26 610 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 BRD1O95696 1058 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 ZNF827Q17R98 1081 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 EXOC3L4Q17RC7 722 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 MIS18BP1Q6P0N0 1132 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 MAGEF1Q9HAY2 307 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 KLHL14Q9P2G3 628 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 OAS2P29728 719 aaKnown RBP19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 VCX3AQ9NNX9 186 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 USH1CQ9Y6N9 552 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 UBXN2AP68543 259 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 ADAT2Q7Z6V5 191 aaKnown RBP19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 EXOC8Q8IYI6 725 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 TSC1Q92574 1164 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 EFCC1Q9HA90 598 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 PRKAG2Q9UGJ0 569 aa19.84■□□□□ 0.77
SFSWAP-203ENST00000535236 WDR17Q8IZU2 1322 aa19.83■□□□□ 0.77
SFSWAP-203ENST00000535236 RFC1P35251 1148 aaPredicted RBP19.83■□□□□ 0.77
SFSWAP-203ENST00000535236 CCDC38Q502W7 563 aa19.83■□□□□ 0.77
SFSWAP-203ENST00000535236 JADE1Q6IE81 842 aa19.83■□□□□ 0.77
SFSWAP-203ENST00000535236 TMC4Q7Z404 712 aa19.83■□□□□ 0.77
SFSWAP-203ENST00000535236 HDAC11Q96DB2 347 aa19.83■□□□□ 0.77
SFSWAP-203ENST00000535236 DESI2Q9BSY9 194 aa19.83■□□□□ 0.77
SFSWAP-203ENST00000535236 TPCN1Q9ULQ1 816 aa19.83■□□□□ 0.77
SFSWAP-203ENST00000535236 TTLL1O95922 423 aa19.83■□□□□ 0.77
SFSWAP-203ENST00000535236 ECE1P42892 770 aa19.83■□□□□ 0.76
SFSWAP-203ENST00000535236 RFX6Q8HWS3 928 aa19.83■□□□□ 0.76
SFSWAP-203ENST00000535236 CLIC6Q96NY7 704 aa19.83■□□□□ 0.76
SFSWAP-203ENST00000535236 ZSWIM6Q9HCJ5 1215 aa19.83■□□□□ 0.76
SFSWAP-203ENST00000535236 TMEM2Q9UHN6 1383 aa19.83■□□□□ 0.76
SFSWAP-203ENST00000535236 BAG5Q9UL15 447 aa19.83■□□□□ 0.76
SFSWAP-203ENST00000535236 ABCC2Q92887 1545 aa19.83■□□□□ 0.76
SFSWAP-203ENST00000535236 NACC1Q96RE7 527 aa19.83■□□□□ 0.76
SFSWAP-203ENST00000535236 SNX25Q9H3E2 840 aa19.83■□□□□ 0.76
SFSWAP-203ENST00000535236 INO80B-WBP1J3KQ70 363 aa19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 SPATA1Q5VX52 437 aa19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 INO80BQ9C086 356 aaPredicted RBP19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 HVCN1Q96D96 273 aa19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 ABCC4O15439 1325 aa19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 SOS2Q07890 1332 aaPredicted RBP19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 LAD1O00515 517 aa19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 SRGAP2BP0DMP2 458 aa19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 TTBK2Q6IQ55 1244 aa19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 ARMC9Q7Z3E5 817 aa19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 TCP1P17987 556 aaKnown RBP19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 IRX4P78413 519 aa19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 RNASELQ05823 741 aaKnown RBP19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 Q3C1V9 767 aa19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 RYBPQ8N488 228 aaPredicted RBP19.82■□□□□ 0.76
SFSWAP-203ENST00000535236 FAM114A2Q9NRY5 505 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 KIF9Q9HAQ2 790 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 IFT122Q9HBG6 1241 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 PASKQ96RG2 1323 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 SERPINB2P05120 415 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 YWHAGP61981 247 aaKnown RBP eCLIP19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 NOP9Q86U38 636 aaKnown RBP19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 HAUS8Q9BT25 410 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 STK38LQ9Y2H1 464 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 ATP10DQ9P241 1426 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 GAP43P17677 238 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 BRD3Q15059 726 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 KCTD1Q719H9 257 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 HAUS4Q9H6D7 363 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 PCDHA4Q9UN74 947 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 ZSCAN20P17040 1043 aaPredicted RBP19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 CC2D2BQ6DHV5 1058 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 KMT5AQ9NQR1 393 aa19.81■□□□□ 0.76
SFSWAP-203ENST00000535236 ATP7AQ04656 1500 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 CIAO1O76071 339 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 PCDHA7Q9UN72 937 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 ZNF853P0CG23 659 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 CCND2P30279 289 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 CLNS1AP54105 237 aaKnown RBP19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 LARP4BQ92615 738 aaKnown RBP19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 ACCSQ96QU6 501 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 CUEDC2Q9H467 287 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 PPP2R2CQ9Y2T4 447 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 MYO1FO00160 1098 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms