RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 PRR33A8MZF0 331 aa7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 ZNF865P0CJ78 1059 aaPredicted RBP7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 ETF1P62495 437 aaKnown RBP7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 PTPN11Q06124 597 aaPredicted RBP7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 SLBPQ14493 270 aaKnown RBP eCLIP7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 CDKAL1Q5VV42 579 aa7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 C22orf34Q6ZV56 151 aa7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 CYFIP1Q7L576 1253 aa7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 C16orf71Q8IYS4 520 aaPredicted RBP7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 MFSD2AQ8NA29 543 aa7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 BHLHE22Q8NFJ8 381 aaPredicted RBP7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 IL17REQ8NFR9 667 aa7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 OTUD7AQ8TE49 926 aaPredicted RBP7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 WNT10AQ9GZT5 417 aa7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 ATP13A1Q9HD20 1204 aa7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 SEMA3GQ9NS98 782 aa7.25□□□□□ -1.25
TNFRSF1A-206ENST00000535038 SETD1BQ9UPS6 1966 aaKnown RBP7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 IBTKQ9P2D0 1353 aaPredicted RBP7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 HEG1Q9ULI3 1381 aa7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 SDSP20132 328 aa7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 CAP2P40123 477 aa7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 RABEP1Q15276 862 aa7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 FYB2Q5VWT5 728 aa7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 SPOCD1Q6ZMY3 1216 aa7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 SV2BQ7L1I2 683 aa7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 NGDNQ8NEJ9 315 aaKnown RBP7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 IP6K1Q92551 441 aa7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 GAL3ST3Q96A11 431 aa7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 LIN37Q96GY3 246 aaPredicted RBP7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 STAP2Q9UGK3 403 aa7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 TSPYL4Q9UJ04 414 aa7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 TTF2Q9UNY4 1162 aaKnown RBP7.24□□□□□ -1.25
TNFRSF1A-206ENST00000535038 ABCC6O95255 1503 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 H3BS24 57 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 GLI1P08151 1106 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 HOXB7P09629 217 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 AMPHP49418 695 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 FGD1P98174 961 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 ATP8B2P98198 1209 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 NKG7Q16617 165 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 FBLN7Q53RD9 439 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 WIPI1Q5MNZ9 446 aaPredicted RBP7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 ZNF746Q6NUN9 644 aaPredicted RBP7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 NPAS4Q8IUM7 802 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 TNPO1Q92973 898 aaKnown RBP7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 KIRREL1Q96J84 757 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 MIS18AQ9NYP9 233 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 ISY1Q9ULR0 285 aaKnown RBP7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 SNCAIPQ9Y6H5 919 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 AOX1Q06278 1338 aa7.23□□□□□ -1.25
TNFRSF1A-206ENST00000535038 ALS2Q96Q42 1657 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 F6X3S4 739 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 SMARCA5O60264 1052 aaPredicted RBP7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 HMMRO75330 724 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 GNAI2P04899 355 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 PDE1AP54750 535 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 TAF7Q15545 349 aaPredicted RBP7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 L1TD1Q5T7N2 865 aaKnown RBP7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 CCDC30Q5VVM6 783 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 TTBK2Q6IQ55 1244 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 LETMD1Q6P1Q0 360 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 MPZL3Q6UWV2 235 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 HID1Q8IV36 788 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 SSH3Q8TE77 659 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 RTF1Q92541 710 aaKnown RBP7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 CAPN6Q9Y6Q1 641 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 IVNS1ABPQ9Y6Y0 642 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 CNTNAP4Q9C0A0 1308 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 KIF1AQ12756 1690 aa7.22□□□□□ -1.25
TNFRSF1A-206ENST00000535038 COL18A1P39060 1754 aa7.21□□□□□ -1.25
TNFRSF1A-206ENST00000535038 EPB41L2O43491 1005 aaKnown RBP7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 GNAI3P08754 354 aa7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 XRCC6P12956 609 aaKnown RBP eCLIP7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 GDNFP39905 211 aa7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 RAP1GAPP47736 663 aa7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 TMEM67Q5HYA8 995 aa7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 FAM43AQ8N2R8 423 aa7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 RIN3Q8TB24 985 aa7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 PPP1R16BQ96T49 567 aa7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 USP44Q9H0E7 712 aa7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 C19orf73Q9NVV2 129 aa7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 ST14Q9Y5Y6 855 aa7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 USP42Q9H9J4 1324 aaKnown RBP7.21□□□□□ -1.26
TNFRSF1A-206ENST00000535038 PXDNQ92626 1479 aa7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 PNMA6EA0A0J9YXQ4 647 aa7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 TSPAN15O95858 294 aa7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 P4HBP07237 508 aaKnown RBP7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 HSP90AB1P08238 724 aaKnown RBP7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 LMNB1P20700 586 aa7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 PTMSP20962 102 aa7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 CDK8P49336 464 aa7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 EIF4A1P60842 406 aaKnown RBP7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 KRTAP19-4Q3LI73 84 aa7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 PRAMEF13Q5VWM6 474 aa7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 PRR23BQ6ZRT6 265 aa7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 THAP5Q7Z6K1 395 aa7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 XAGE3Q8WTP9 111 aa7.2□□□□□ -1.26
TNFRSF1A-206ENST00000535038 FRMD6Q96NE9 622 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms