RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 TLE2Q04725 743 aa12.11□□□□□ -0.47
CSDE1-217ENST00000534699 PDE4DQ08499 809 aa12.11□□□□□ -0.47
CSDE1-217ENST00000534699 NSUN6Q8TEA1 469 aaKnown RBP12.11□□□□□ -0.47
CSDE1-217ENST00000534699 RIOX1Q9H6W3 641 aa12.11□□□□□ -0.47
CSDE1-217ENST00000534699 PGK1P00558 417 aa12.11□□□□□ -0.47
CSDE1-217ENST00000534699 PFKMP08237 780 aa12.11□□□□□ -0.47
CSDE1-217ENST00000534699 CDC37Q16543 378 aaPredicted RBP12.11□□□□□ -0.47
CSDE1-217ENST00000534699 FSCN1Q16658 493 aaKnown RBP12.11□□□□□ -0.47
CSDE1-217ENST00000534699 XRRA1Q6P2D8 792 aa12.11□□□□□ -0.47
CSDE1-217ENST00000534699 CASC1Q6TDU7 716 aa12.11□□□□□ -0.47
CSDE1-217ENST00000534699 NSMFQ6X4W1 530 aa12.11□□□□□ -0.47
CSDE1-217ENST00000534699 TLK2Q86UE8 772 aa12.11□□□□□ -0.47
CSDE1-217ENST00000534699 EMID1Q96A84 441 aaPredicted RBP12.11□□□□□ -0.47
CSDE1-217ENST00000534699 CTAGE5O15320 804 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 PARNO95453 639 aaKnown RBP12.1□□□□□ -0.47
CSDE1-217ENST00000534699 ASGR1P07306 291 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 C6orf222P0C671 652 aaPredicted RBP12.1□□□□□ -0.47
CSDE1-217ENST00000534699 KIF5BP33176 963 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 RFC2P35250 354 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 HSD17B4P51659 736 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 GNASQ5JWF2 1037 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 RNF20Q5VTR2 975 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 ADGRF4Q8IZF3 695 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 MTIF3Q9H2K0 278 aaKnown RBP12.1□□□□□ -0.47
CSDE1-217ENST00000534699 TBX21Q9UL17 535 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 FRMPD2Q68DX3 1309 aaPredicted RBP12.1□□□□□ -0.47
CSDE1-217ENST00000534699 CD4P01730 458 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 RCAN1P53805 252 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 TTLL4Q14679 1199 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 TMEM199Q8N511 208 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 HOMER2Q9NSB8 354 aa12.1□□□□□ -0.47
CSDE1-217ENST00000534699 ZBTB5O15062 677 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 SLC16A2P36021 539 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 LIFRP42702 1097 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 RPS6P62753 249 aaKnown RBP12.09□□□□□ -0.47
CSDE1-217ENST00000534699 FPGSQ05932 587 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 WTAPQ15007 396 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 TSGA10IPQ3SY00 556 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 MFSD5Q6N075 450 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 CATIPQ7Z7H3 387 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 SESTD1Q86VW0 696 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 MTG1Q9BT17 334 aaPredicted RBP12.09□□□□□ -0.47
CSDE1-217ENST00000534699 SPZ1Q9BXG8 430 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 TMEM39AQ9NV64 488 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 PTPDC1A2A3K4 754 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 E7EWF7 191 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 CYP21A2P08686 494 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 RAG1P15918 1043 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 STXBP2Q15833 593 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 NFRKBQ6P4R8 1299 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 PSRC1Q6PGN9 363 aaPredicted RBP12.09□□□□□ -0.47
CSDE1-217ENST00000534699 FAM126BQ8IXS8 530 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 JMJD4Q9H9V9 463 aa12.09□□□□□ -0.47
CSDE1-217ENST00000534699 SCN10AQ9Y5Y9 1956 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 EIF3JO75822 258 aaKnown RBP12.08□□□□□ -0.48
CSDE1-217ENST00000534699 TGFB3P10600 412 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 SMPD1P17405 629 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
CSDE1-217ENST00000534699 FAAP100Q0VG06 881 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 PPP2R5BQ15173 497 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 QRICH1Q2TAL8 776 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 ERICH6BQ5W0A0 696 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 PNMA6FA0A0J9YX94 578 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 A6NJR5 290 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 KLRF2D3W0D1 207 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 NFIBO00712 420 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 IFIT3O14879 490 aaKnown RBP12.08□□□□□ -0.48
CSDE1-217ENST00000534699 EIF5BO60841 1220 aaKnown RBP12.08□□□□□ -0.48
CSDE1-217ENST00000534699 SYN1P17600 705 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 MCM5P33992 734 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 KRT32Q14532 448 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 MB21D2Q8IYB1 491 aaPredicted RBP12.08□□□□□ -0.48
CSDE1-217ENST00000534699 ESYT1Q9BSJ8 1104 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 WDR11Q9BZH6 1224 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 MAD2L2Q9UI95 211 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 STXBP5LQ9Y2K9 1186 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 ASTN1O14525 1302 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 FRMPD4Q14CM0 1322 aa12.08□□□□□ -0.48
CSDE1-217ENST00000534699 RPUSD2Q8IZ73 545 aaKnown RBP12.07□□□□□ -0.48
CSDE1-217ENST00000534699 CCDC155Q8N6L0 562 aa12.07□□□□□ -0.48
CSDE1-217ENST00000534699 SYTL5Q8TDW5 730 aaPredicted RBP12.07□□□□□ -0.48
CSDE1-217ENST00000534699 TRIM43BA6NCK2 446 aa12.07□□□□□ -0.48
CSDE1-217ENST00000534699 hCG_1984214I3L0E3 225 aa12.07□□□□□ -0.48
CSDE1-217ENST00000534699 GH1P01241 217 aa12.07□□□□□ -0.48
CSDE1-217ENST00000534699 HMGB1P09429 215 aaKnown RBP12.07□□□□□ -0.48
CSDE1-217ENST00000534699 ITGA7Q13683 1181 aa12.07□□□□□ -0.48
CSDE1-217ENST00000534699 STOX1Q6ZVD7 989 aa12.07□□□□□ -0.48
CSDE1-217ENST00000534699 CYB5R4Q7L1T6 521 aa12.07□□□□□ -0.48
CSDE1-217ENST00000534699 ZNF713Q8N859 430 aaPredicted RBP12.07□□□□□ -0.48
CSDE1-217ENST00000534699 TRIM43Q96BQ3 446 aaPredicted RBP12.07□□□□□ -0.48
CSDE1-217ENST00000534699 KATNAL1Q9BW62 490 aa12.07□□□□□ -0.48
CSDE1-217ENST00000534699 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
CSDE1-217ENST00000534699 RBM8AQ9Y5S9 174 aaKnown RBP12.07□□□□□ -0.48
CSDE1-217ENST00000534699 ANO1Q5XXA6 986 aa12.06□□□□□ -0.48
CSDE1-217ENST00000534699 CCDC62Q6P9F0 684 aa12.06□□□□□ -0.48
CSDE1-217ENST00000534699 SLC30A10Q6XR72 485 aa12.06□□□□□ -0.48
CSDE1-217ENST00000534699 OR6J1Q8NGC5 347 aa12.06□□□□□ -0.48
CSDE1-217ENST00000534699 IGDCC4Q8TDY8 1250 aa12.06□□□□□ -0.48
CSDE1-217ENST00000534699 BADQ92934 168 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms