RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 YBX2Q9Y2T7 364 aaKnown RBP8.54□□□□□ -1.04
GEN1-207ENST00000534669 COG6Q9Y2V7 657 aa8.54□□□□□ -1.04
GEN1-207ENST00000534669 GRIN2DO15399 1336 aa8.54□□□□□ -1.04
GEN1-207ENST00000534669 PTPRSQ13332 1948 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 ARVCFO00192 962 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 TNFRSF10AO00220 468 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 RNF40O75150 1001 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 PRDM1O75626 825 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 CD4P01730 458 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 GJA9P57773 515 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 CCDC85BQ15834 202 aaPredicted RBP8.53□□□□□ -1.04
GEN1-207ENST00000534669 HSP90AB4PQ58FF6 505 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 TSHZ3Q63HK5 1081 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 ARMCX2Q7L311 632 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 LRRC47Q8N1G4 583 aaKnown RBP8.53□□□□□ -1.04
GEN1-207ENST00000534669 NUP133Q8WUM0 1156 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 OSBP2Q969R2 916 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 KIFC2Q96AC6 838 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 DDX11Q96FC9 970 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 NECAB3Q96P71 396 aaPredicted RBP8.53□□□□□ -1.04
GEN1-207ENST00000534669 NKX2-4Q9H2Z4 354 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 SLC38A10Q9HBR0 1119 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 ZBTB40Q9NUA8 1239 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 BDP1A6H8Y1 2624 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 ELP1O95163 1332 aa8.53□□□□□ -1.04
GEN1-207ENST00000534669 PRRC2BQ5JSZ5 2229 aaKnown RBP8.52□□□□□ -1.05
GEN1-207ENST00000534669 MINDY4BA8MYZ0 360 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 M0R2C6 588 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 ATP2A1O14983 1001 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 MYOGP15173 224 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 COPB2P35606 906 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 RABGGTBP53611 331 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 SNAP25P60880 206 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 PPIGQ13427 754 aaKnown RBP eCLIP8.52□□□□□ -1.051e-6■□□□□ 8.5
GEN1-207ENST00000534669 SBK1Q52WX2 424 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 GNASQ5JWF2 1037 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 CXCL17Q6UXB2 119 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 CCDC129Q6ZRS4 1044 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.52□□□□□ -1.05
GEN1-207ENST00000534669 CCDC144CPQ8IYA2 1237 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 MSL3Q8N5Y2 521 aaKnown RBP8.52□□□□□ -1.05
GEN1-207ENST00000534669 SYMPKQ92797 1274 aaKnown RBP8.52□□□□□ -1.05
GEN1-207ENST00000534669 CEP95Q96GE4 821 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 GLT1D1Q96MS3 346 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 PURBQ96QR8 312 aaKnown RBP8.52□□□□□ -1.05
GEN1-207ENST00000534669 WNT8AQ9H1J5 351 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 HOMER2Q9NSB8 354 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 NYAP2Q9P242 653 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 ARPP21Q9UBL0 812 aaPredicted RBP8.52□□□□□ -1.05
GEN1-207ENST00000534669 CLIP2Q9UDT6 1046 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 ZNF536O15090 1300 aa8.52□□□□□ -1.05
GEN1-207ENST00000534669 A0A0U1RQG5 324 aaPredicted RBP8.51□□□□□ -1.05
GEN1-207ENST00000534669 RAB11FIP3O75154 756 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 OATP04181 439 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 CENPBP07199 599 aaPredicted RBP8.51□□□□□ -1.05
GEN1-207ENST00000534669 CCL23P55773 120 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 PSMC6P62333 389 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 NKX3-2P78367 333 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 RPAP2Q8IXW5 612 aaPredicted RBP8.51□□□□□ -1.05
GEN1-207ENST00000534669 ANKRD35Q8N283 1001 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 FAM133AQ8N9E0 248 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 PRPF38AQ8NAV1 312 aaKnown RBP8.51□□□□□ -1.05
GEN1-207ENST00000534669 SLC43A3Q8NBI5 491 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 ADAMTS19Q8TE59 1207 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 PPP1R13LQ8WUF5 828 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 HERVK_113Q902F9 699 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 AGBL1Q96MI9 1066 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 ASB2Q96Q27 587 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.51□□□□□ -1.05
GEN1-207ENST00000534669 TRPV6Q9H1D0 765 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 TMEM134Q9H6X4 195 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 IL23AQ9NPF7 189 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 A1CFQ9NQ94 594 aaKnown RBP8.51□□□□□ -1.05
GEN1-207ENST00000534669 PDGFCQ9NRA1 345 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 GNEQ9Y223 722 aaKnown RBP8.51□□□□□ -1.05
GEN1-207ENST00000534669 TET1Q8NFU7 2136 aa8.51□□□□□ -1.05
GEN1-207ENST00000534669 COL4A4P53420 1690 aaPredicted RBP8.5□□□□□ -1.05
GEN1-207ENST00000534669 RFXAPO00287 272 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 B4GALT4O60513 344 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 ZBED4O75132 1171 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 ARHGEF15O94989 841 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 SMPD1P17405 629 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 IGFBP4P22692 258 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 MUM1L1Q5H9M0 696 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 AKNAD1Q5T1N1 836 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 C20orf194Q5TEA3 1177 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 PSRC1Q6PGN9 363 aaPredicted RBP8.5□□□□□ -1.05
GEN1-207ENST00000534669 OTOP2Q7RTS6 562 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 AMOTL1Q8IY63 956 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 TMEM199Q8N511 208 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 PCSK9Q8NBP7 692 aaKnown RBP8.5□□□□□ -1.05
GEN1-207ENST00000534669 MKL1Q969V6 931 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 VTI1AQ96AJ9 217 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 SCLYQ96I15 445 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 GAS2L1Q99501 681 aaPredicted RBP8.5□□□□□ -1.05
GEN1-207ENST00000534669 NOC4LQ9BVI4 516 aaKnown RBP8.5□□□□□ -1.05
GEN1-207ENST00000534669 PRR14Q9BWN1 585 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 TANC1Q9C0D5 1861 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 ABHD16BQ9H3Z7 469 aa8.5□□□□□ -1.05
GEN1-207ENST00000534669 MKNK2Q9HBH9 465 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms