RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 USP2O75604 605 aaPredicted RBP19.37■□□□□ 0.69
VPS51-216ENST00000534591 SNAP25P60880 206 aa19.37■□□□□ 0.69
VPS51-216ENST00000534591 LETM2Q2VYF4 491 aa19.37■□□□□ 0.69
VPS51-216ENST00000534591 ZNF280CQ8ND82 737 aa19.37■□□□□ 0.69
VPS51-216ENST00000534591 KIFC2Q96AC6 838 aa19.37■□□□□ 0.69
VPS51-216ENST00000534591 PYM1Q9BRP8 204 aaKnown RBP19.37■□□□□ 0.69
VPS51-216ENST00000534591 VWA3AA6NCI4 1184 aa19.36■□□□□ 0.69
VPS51-216ENST00000534591 C19orf81C9J6K1 198 aa19.36■□□□□ 0.69
VPS51-216ENST00000534591 CCNT1O60563 726 aaKnown RBP19.36■□□□□ 0.69
VPS51-216ENST00000534591 CAVIN2O95810 425 aa19.36■□□□□ 0.69
VPS51-216ENST00000534591 FOSP01100 380 aaPredicted RBP19.36■□□□□ 0.69
VPS51-216ENST00000534591 LBX1P52954 281 aa19.36■□□□□ 0.69
VPS51-216ENST00000534591 UBE2SQ16763 222 aa19.36■□□□□ 0.69
VPS51-216ENST00000534591 SPECC1Q5M775 1068 aa19.36■□□□□ 0.69
VPS51-216ENST00000534591 DTHD1Q6ZMT9 781 aa19.36■□□□□ 0.69
VPS51-216ENST00000534591 PRPF38AQ8NAV1 312 aaKnown RBP19.36■□□□□ 0.69
VPS51-216ENST00000534591 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.36■□□□□ 0.69
VPS51-216ENST00000534591 ZKSCAN4Q969J2 545 aaPredicted RBP19.36■□□□□ 0.69
VPS51-216ENST00000534591 USP25Q9UHP3 1055 aa19.36■□□□□ 0.69
VPS51-216ENST00000534591 HOOK1Q9UJC3 728 aaKnown RBP19.36■□□□□ 0.69
VPS51-216ENST00000534591 NEMFO60524 1076 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 GCFC2P16383 781 aaKnown RBP19.35■□□□□ 0.69
VPS51-216ENST00000534591 CTCFP49711 727 aaPredicted RBP19.35■□□□□ 0.69
VPS51-216ENST00000534591 BACE1P56817 501 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 SPP2Q13103 211 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 MTMR2Q13614 643 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 UVSSAQ2YD98 709 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 USH1GQ495M9 461 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 KANK3Q6NY19 840 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 KRBA2Q6ZNG9 492 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 CCDC34Q96HJ3 373 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 SLF1Q9BQI6 1058 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 BEGAINQ9BUH8 593 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 KIAA1468Q9P260 1216 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 MEIS2O14770 477 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 OR52Z1P0C646 297 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 FDX1P10109 184 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 PPP4R3AQ6IN85 833 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 CNNM3Q8NE01 707 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 C12orf42Q96LP6 360 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 TMEM60Q9H2L4 133 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 EMILIN3Q9NT22 766 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 PNMA2Q9UL42 364 aa19.35■□□□□ 0.69
VPS51-216ENST00000534591 MRPL11Q9Y3B7 192 aaKnown RBP19.35■□□□□ 0.69
VPS51-216ENST00000534591 ABCB11O95342 1321 aa19.34■□□□□ 0.69
VPS51-216ENST00000534591 PIK3CDO00329 1044 aa19.34■□□□□ 0.69
VPS51-216ENST00000534591 POLR2DO15514 142 aaKnown RBP19.34■□□□□ 0.69
VPS51-216ENST00000534591 PPP1R12BO60237 982 aaPredicted RBP19.34■□□□□ 0.69
VPS51-216ENST00000534591 USP11P51784 963 aa19.34■□□□□ 0.69
VPS51-216ENST00000534591 MAP3K9P80192 1104 aa19.34■□□□□ 0.69
VPS51-216ENST00000534591 IL17AQ16552 155 aa19.34■□□□□ 0.69
VPS51-216ENST00000534591 STX1AQ16623 288 aa19.34■□□□□ 0.69
VPS51-216ENST00000534591 LONRF3Q496Y0 759 aa19.34■□□□□ 0.69
VPS51-216ENST00000534591 SYMPKQ92797 1274 aaKnown RBP19.34■□□□□ 0.69
VPS51-216ENST00000534591 FBXO28Q9NVF7 368 aa19.34■□□□□ 0.69
VPS51-216ENST00000534591 USP17L15C9J2P7 530 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 USP17L13C9JLJ4 530 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 USP17L11C9JVI0 530 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 USP17L18D6R9N7 530 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 USP17L22D6RA61 530 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 USP17L17D6RBQ6 530 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 USP17L19D6RCP7 530 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 USP17L20D6RJB6 530 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 VCAM1P19320 739 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 TXLNAP40222 546 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 USP17L24Q0WX57 530 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 USP17L6PQ6QN14 398 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 USP49Q70CQ1 688 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 ANP32BQ92688 251 aaKnown RBP19.33■□□□□ 0.68
VPS51-216ENST00000534591 EPSTI1Q96J88 318 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 AK8Q96MA6 479 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 ANO3Q9BYT9 981 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 ZHX2Q9Y6X8 837 aa19.33■□□□□ 0.68
VPS51-216ENST00000534591 PHIPQ8WWQ0 1821 aa19.32■□□□□ 0.68
VPS51-216ENST00000534591 ICAM1P05362 532 aa19.32■□□□□ 0.68
VPS51-216ENST00000534591 GJA5P36382 358 aa19.32■□□□□ 0.68
VPS51-216ENST00000534591 ZRSR1Q15695 479 aaKnown RBP19.32■□□□□ 0.68
VPS51-216ENST00000534591 CCDC174Q6PII3 467 aa19.32■□□□□ 0.68
VPS51-216ENST00000534591 MOXD1Q6UVY6 613 aa19.32■□□□□ 0.68
VPS51-216ENST00000534591 RNF214Q8ND24 703 aa19.32■□□□□ 0.68
VPS51-216ENST00000534591 TANGO6Q9C0B7 1094 aa19.32■□□□□ 0.68
VPS51-216ENST00000534591 ANO10Q9NW15 660 aa19.32■□□□□ 0.68
VPS51-216ENST00000534591 PPP1R9AQ9ULJ8 1098 aa19.32■□□□□ 0.68
VPS51-216ENST00000534591 OPLAHO14841 1288 aa19.31■□□□□ 0.68
VPS51-216ENST00000534591 ACTN4O43707 911 aaKnown RBP19.31■□□□□ 0.68
VPS51-216ENST00000534591 EDIL3O43854 480 aa19.31■□□□□ 0.68
VPS51-216ENST00000534591 SLFN14P0C7P3 912 aa19.31■□□□□ 0.68
VPS51-216ENST00000534591 IREB2P48200 963 aaKnown RBP19.31■□□□□ 0.68
VPS51-216ENST00000534591 SPRYD7Q5W111 196 aa19.31■□□□□ 0.68
VPS51-216ENST00000534591 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.31■□□□□ 0.68
VPS51-216ENST00000534591 FAM200AQ8TCP9 573 aa19.31■□□□□ 0.68
VPS51-216ENST00000534591 CNKSR2Q8WXI2 1034 aa19.31■□□□□ 0.68
VPS51-216ENST00000534591 RPAP3Q9H6T3 665 aaPredicted RBP19.31■□□□□ 0.68
VPS51-216ENST00000534591 SERTAD1Q9UHV2 236 aa19.31■□□□□ 0.68
VPS51-216ENST00000534591 SPDYE3A6NKU9 549 aa19.3■□□□□ 0.68
VPS51-216ENST00000534591 FLOT1O75955 427 aa19.3■□□□□ 0.68
VPS51-216ENST00000534591 CALCRLQ16602 461 aa19.3■□□□□ 0.68
VPS51-216ENST00000534591 ANO6Q4KMQ2 910 aa19.3■□□□□ 0.68
VPS51-216ENST00000534591 TNS4Q8IZW8 715 aa19.3■□□□□ 0.68
VPS51-216ENST00000534591 MTMR9Q96QG7 549 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms