RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, human

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1-210	ENST00000534406	PHKB	Q93100	1093 aa		27.91	■■■□□ 2.06
SIPA1-210	ENST00000534406	FGD4	Q96M96	766 aa		27.91	■■■□□ 2.06
SIPA1-210	ENST00000534406	RNF26	Q9BY78	433 aa	Predicted RBP	27.91	■■■□□ 2.06
SIPA1-210	ENST00000534406	LIMCH1	Q9UPQ0	1083 aa		27.91	■■■□□ 2.06
SIPA1-210	ENST00000534406	MCM3AP	O60318	1980 aa		27.91	■■■□□ 2.06
SIPA1-210	ENST00000534406	hCG_1984214	I3L0E3	225 aa		27.9	■■■□□ 2.06
SIPA1-210	ENST00000534406	CDKL5	O76039	1030 aa		27.9	■■■□□ 2.06
SIPA1-210	ENST00000534406	PRKAR2A	P13861	404 aa	Known RBP	27.9	■■■□□ 2.06
SIPA1-210	ENST00000534406	GHRHR	Q02643	423 aa		27.9	■■■□□ 2.06
SIPA1-210	ENST00000534406	WWC2	Q6AWC2	1192 aa		27.9	■■■□□ 2.06
SIPA1-210	ENST00000534406	TRIM22	Q8IYM9	498 aa		27.9	■■■□□ 2.06
SIPA1-210	ENST00000534406	MSL3	Q8N5Y2	521 aa	Known RBP	27.9	■■■□□ 2.06
SIPA1-210	ENST00000534406	ZNF713	Q8N859	430 aa	Predicted RBP	27.9	■■■□□ 2.06
SIPA1-210	ENST00000534406	GTF3C6	Q969F1	213 aa		27.9	■■■□□ 2.06
SIPA1-210	ENST00000534406	SLC26A6	Q9BXS9	759 aa		27.9	■■■□□ 2.06
SIPA1-210	ENST00000534406	PRPF3	O43395	683 aa	Known RBP	27.89	■■■□□ 2.06
SIPA1-210	ENST00000534406	CFB	P00751	764 aa		27.89	■■■□□ 2.06
SIPA1-210	ENST00000534406	IGHA2	P01877	340 aa		27.89	■■■□□ 2.06
SIPA1-210	ENST00000534406	TRIM32	Q13049	653 aa		27.89	■■■□□ 2.06
SIPA1-210	ENST00000534406	PFKFB3	Q16875	520 aa	Predicted RBP	27.89	■■■□□ 2.06
SIPA1-210	ENST00000534406	SAMD3	Q8N6K7	520 aa		27.89	■■■□□ 2.06
SIPA1-210	ENST00000534406	TINF2	Q9BSI4	451 aa		27.89	■■■□□ 2.06
SIPA1-210	ENST00000534406	SOWAHB	A6NEL2	793 aa		27.88	■■■□□ 2.05
SIPA1-210	ENST00000534406	PPFIA3	O75145	1194 aa		27.88	■■■□□ 2.05
SIPA1-210	ENST00000534406	SCG2	P13521	617 aa		27.88	■■■□□ 2.05
SIPA1-210	ENST00000534406	CYP2C19	P33261	490 aa		27.88	■■■□□ 2.05
SIPA1-210	ENST00000534406	HSD17B4	P51659	736 aa		27.88	■■■□□ 2.05
SIPA1-210	ENST00000534406	MAP3K21	Q5TCX8	1036 aa		27.88	■■■□□ 2.05
SIPA1-210	ENST00000534406	PPP1R18	Q6NYC8	613 aa		27.88	■■■□□ 2.05
SIPA1-210	ENST00000534406	NECAB1	Q8N987	351 aa		27.88	■■■□□ 2.05
SIPA1-210	ENST00000534406	TBC1D5	Q92609	795 aa		27.88	■■■□□ 2.05
SIPA1-210	ENST00000534406	ADD3	Q9UEY8	706 aa	Known RBP	27.88	■■■□□ 2.05
SIPA1-210	ENST00000534406	SYNGAP1	Q96PV0	1343 aa		27.88	■■■□□ 2.05
SIPA1-210	ENST00000534406	MYC	P01106	439 aa	Predicted RBP	27.87	■■■□□ 2.05
SIPA1-210	ENST00000534406	NAPA	P54920	295 aa		27.87	■■■□□ 2.05
SIPA1-210	ENST00000534406	SSRP1	Q08945	709 aa	Known RBP	27.87	■■■□□ 2.05
SIPA1-210	ENST00000534406	MAMDC4	Q6UXC1	1216 aa		27.87	■■■□□ 2.05
SIPA1-210	ENST00000534406	SYTL5	Q8TDW5	730 aa	Predicted RBP	27.87	■■■□□ 2.05
SIPA1-210	ENST00000534406	MAP3K20	Q9NYL2	800 aa	Known RBP	27.87	■■■□□ 2.05
SIPA1-210	ENST00000534406	ASTN1	O14525	1302 aa		27.87	■■■□□ 2.05
SIPA1-210	ENST00000534406	LRRC37A2	A6NM11	1700 aa		27.87	■■■□□ 2.05
SIPA1-210	ENST00000534406	ASB14	A6NK59	587 aa		27.86	■■■□□ 2.05
SIPA1-210	ENST00000534406	GCOM1	H8Y6P7	765 aa	Predicted RBP	27.86	■■■□□ 2.05
SIPA1-210	ENST00000534406	STXBP3	O00186	592 aa		27.86	■■■□□ 2.05
SIPA1-210	ENST00000534406	POLR2M	P0CAP2	368 aa		27.86	■■■□□ 2.05
SIPA1-210	ENST00000534406	CACNB2	Q08289	660 aa	Predicted RBP	27.86	■■■□□ 2.05
SIPA1-210	ENST00000534406	MTFR1	Q15390	333 aa		27.86	■■■□□ 2.05
SIPA1-210	ENST00000534406	DNER	Q8NFT8	737 aa		27.86	■■■□□ 2.05
SIPA1-210	ENST00000534406	ZSCAN31	Q96LW9	406 aa	Predicted RBP	27.86	■■■□□ 2.05
SIPA1-210	ENST00000534406	PURB	Q96QR8	312 aa	Known RBP	27.86	■■■□□ 2.05
SIPA1-210	ENST00000534406	SH2B1	Q9NRF2	756 aa	Predicted RBP	27.86	■■■□□ 2.05
SIPA1-210	ENST00000534406	BARHL2	Q9NY43	387 aa		27.86	■■■□□ 2.05
SIPA1-210	ENST00000534406	LOC102724159	A0A0B4J2E5	919 aa		27.85	■■■□□ 2.05
SIPA1-210	ENST00000534406	CCL5	P13501	91 aa		27.85	■■■□□ 2.05
SIPA1-210	ENST00000534406	ALDH5A1	P51649	535 aa	Predicted RBP	27.85	■■■□□ 2.05
SIPA1-210	ENST00000534406	PWP2	Q15269	919 aa	Known RBP	27.85	■■■□□ 2.05
SIPA1-210	ENST00000534406	PKN1	Q16512	942 aa		27.85	■■■□□ 2.05
SIPA1-210	ENST00000534406	ARMCX2	Q7L311	632 aa		27.85	■■■□□ 2.05
SIPA1-210	ENST00000534406	CUL5	Q93034	780 aa		27.85	■■■□□ 2.05
SIPA1-210	ENST00000534406	UNC93B1	Q9H1C4	597 aa		27.85	■■■□□ 2.05
SIPA1-210	ENST00000534406	COL20A1	Q9P218	1284 aa		27.85	■■■□□ 2.05
SIPA1-210	ENST00000534406	NRBP1	Q9UHY1	535 aa		27.85	■■■□□ 2.05
SIPA1-210	ENST00000534406	RPTOR	Q8N122	1335 aa		27.85	■■■□□ 2.05
SIPA1-210	ENST00000534406	STK36	Q9NRP7	1315 aa		27.85	■■■□□ 2.05
SIPA1-210	ENST00000534406	KIAA0100	Q14667	2235 aa	Known RBP	27.84	■■■□□ 2.05
SIPA1-210	ENST00000534406	CYBA	P13498	195 aa		27.84	■■■□□ 2.05
SIPA1-210	ENST00000534406	HOXA13	P31271	388 aa	Predicted RBP	27.84	■■■□□ 2.05
SIPA1-210	ENST00000534406	MPHOSPH6	Q99547	160 aa	Known RBP	27.84	■■■□□ 2.05
SIPA1-210	ENST00000534406	HMX1	Q9NP08	348 aa	Predicted RBP	27.84	■■■□□ 2.05
SIPA1-210	ENST00000534406	CNPY2	Q9Y2B0	182 aa		27.84	■■■□□ 2.05
SIPA1-210	ENST00000534406	DEXI	O95424	95 aa		27.83	■■■□□ 2.05
SIPA1-210	ENST00000534406	TYW1B	Q6NUM6	668 aa		27.83	■■■□□ 2.05
SIPA1-210	ENST00000534406	CCDC12	Q8WUD4	166 aa	Predicted RBP	27.83	■■■□□ 2.05
SIPA1-210	ENST00000534406	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	27.83	■■■□□ 2.05
SIPA1-210	ENST00000534406	RNF208	Q9H0X6	261 aa		27.83	■■■□□ 2.05
SIPA1-210	ENST00000534406	PSTPIP2	Q9H939	334 aa		27.83	■■■□□ 2.05
SIPA1-210	ENST00000534406	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	27.83	■■■□□ 2.05
SIPA1-210	ENST00000534406	MCM2	P49736	904 aa		27.82	■■■□□ 2.04
SIPA1-210	ENST00000534406	CCDC85C	A6NKD9	419 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406		B4DLN1	442 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	PIK3CD	O00329	1044 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	CTDNEP1	O95476	244 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	SNAI1	O95863	264 aa	Predicted RBP	27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	ADCY7	P51828	1080 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	MRPL12	P52815	198 aa	Known RBP	27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	ST3GAL1	Q11201	340 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	CCDC83	Q8IWF9	413 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	TRPV1	Q8NER1	839 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	CCDC148	Q8NFR7	591 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	SMARCC2	Q8TAQ2	1214 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	NSUN6	Q8TEA1	469 aa	Known RBP	27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	TAAR1	Q96RJ0	339 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	RMDN3	Q96TC7	470 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	TMEM106C	Q9BVX2	250 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	BRCA2	P51587	3418 aa		27.81	■■■□□ 2.04
SIPA1-210	ENST00000534406	CD2BP2	O95400	341 aa	Known RBP	27.8	■■■□□ 2.04
SIPA1-210	ENST00000534406	CCND3	P30281	292 aa	Predicted RBP	27.8	■■■□□ 2.04
SIPA1-210	ENST00000534406	FCHSD1	Q86WN1	690 aa		27.8	■■■□□ 2.04
SIPA1-210	ENST00000534406	TEX2	Q8IWB9	1127 aa		27.8	■■■□□ 2.04
SIPA1-210	ENST00000534406	NSUN7	Q8NE18	718 aa	Known RBP	27.8	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms