RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 OGFRQ9NZT2 677 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 CCDC39Q9UFE4 941 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 CTNNA3Q9UI47 895 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 HDAC5Q9UQL6 1122 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 DIS3Q9Y2L1 958 aaKnown RBP3.84□□□□□ -1.79
CSDE1-216ENST00000534389 ZNF451Q9Y4E5 1061 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 SNX11Q9Y5W9 270 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 MORC2Q9Y6X9 1032 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-216ENST00000534389 ZMYM3Q14202 1370 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 CCDC144AA2RUR9 1427 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 KIAA1107Q9UPP5 1409 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 CTTNBP2Q8WZ74 1663 aa3.84□□□□□ -1.8
CSDE1-216ENST00000534389 CTIFO43310 598 aaKnown RBP3.83□□□□□ -1.8
CSDE1-216ENST00000534389 GSNP06396 782 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 SYPP08247 313 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 GSTM1P09488 218 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 HOXA10P31260 410 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-216ENST00000534389 SEPHS1P49903 392 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 AMPD2Q01433 879 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 PRKCQQ04759 706 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 EGR3Q06889 387 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 TERF2Q15554 542 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 ZMYM1Q5SVZ6 1142 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 C22orf34Q6ZV56 151 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 TMPRSS7Q7RTY8 843 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 NOP9Q86U38 636 aaKnown RBP3.83□□□□□ -1.8
CSDE1-216ENST00000534389 KSR1Q8IVT5 923 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 SPACA3Q8IXA5 215 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 ZNF655Q8N720 491 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-216ENST00000534389 BVESQ8NE79 360 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 ST13P5Q8NFI4 369 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-216ENST00000534389 ENOX1Q8TC92 643 aaKnown RBP3.83□□□□□ -1.8
CSDE1-216ENST00000534389 GPT2Q8TD30 523 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 KLHL6Q8WZ60 621 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 MKL1Q969V6 931 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 GPR62Q9BZJ7 368 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 YY1AP1Q9H869 796 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 ATP13A1Q9HD20 1204 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 RNF112Q9ULX5 631 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 FHOD1Q9Y613 1164 aa3.83□□□□□ -1.8
CSDE1-216ENST00000534389 CAMSAP2Q08AD1 1489 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 PLEKHH2Q8IVE3 1493 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 CASKIN1Q8WXD9 1431 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 MTUS2Q5JR59 1369 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 NPC1L1Q9UHC9 1359 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 CNTNAP4Q9C0A0 1308 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 PRR19A6NJB7 356 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 SNRPB2P08579 225 aaKnown RBP3.82□□□□□ -1.8
CSDE1-216ENST00000534389 CDK11BP21127 795 aaKnown RBP3.82□□□□□ -1.8
CSDE1-216ENST00000534389 ENDOUP21128 410 aaKnown RBP3.82□□□□□ -1.8
CSDE1-216ENST00000534389 ZP2Q05996 745 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 NCBP1Q09161 790 aaKnown RBP3.82□□□□□ -1.8
CSDE1-216ENST00000534389 KIAA2012Q0VF49 1180 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 RASGRF1Q13972 1273 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 NOLC1Q14978 699 aaKnown RBP eCLIP3.82□□□□□ -1.8
CSDE1-216ENST00000534389 PLCL1Q15111 1095 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 SLC10A6Q3KNW5 377 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 ANKRD39Q53RE8 183 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 CAVIN1Q6NZI2 390 aaKnown RBP3.82□□□□□ -1.8
CSDE1-216ENST00000534389 CRTC3Q6UUV7 619 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 LRP10Q7Z4F1 713 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 WAPLQ7Z5K2 1190 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 THAP5Q7Z6K1 395 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 VSIG10LQ86VR7 867 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 TSPYL5Q86VY4 417 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-216ENST00000534389 JAMLQ86YT9 394 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 HSCBQ8IWL3 235 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 CNPY4Q8N129 248 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 DAGLBQ8NCG7 672 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 SYTL5Q8TDW5 730 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-216ENST00000534389 PIBF1Q8WXW3 757 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 TCTN2Q96GX1 697 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 CCDC120Q96HB5 630 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 Q96M66 194 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 GBP4Q96PP9 640 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 FEZ1Q99689 392 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 FOXP3Q9BZS1 431 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 KLHL25Q9H0H3 589 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 GEMIN8Q9NWZ8 242 aaKnown RBP3.82□□□□□ -1.8
CSDE1-216ENST00000534389 PRR13Q9NZ81 148 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 CGGBP1Q9UFW8 167 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-216ENST00000534389 VAV3Q9UKW4 847 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 TCFL5Q9UL49 500 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 PYCARDQ9ULZ3 195 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 GPR55Q9Y2T6 319 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-216ENST00000534389 ZDHHC9Q9Y397 364 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 KIF3AQ9Y496 699 aa3.82□□□□□ -1.8
CSDE1-216ENST00000534389 DDX49Q9Y6V7 483 aaKnown RBP3.82□□□□□ -1.8
CSDE1-216ENST00000534389 GCC2Q8IWJ2 1684 aa3.81□□□□□ -1.8
CSDE1-216ENST00000534389 TCOF1Q13428 1488 aaKnown RBP3.81□□□□□ -1.8
CSDE1-216ENST00000534389 FHOD3Q2V2M9 1422 aa3.81□□□□□ -1.8
CSDE1-216ENST00000534389 KIF27Q86VH2 1401 aa3.81□□□□□ -1.8
CSDE1-216ENST00000534389 CGNL1Q0VF96 1302 aa3.81□□□□□ -1.8
CSDE1-216ENST00000534389 A0A087WZG4 1122 aa3.81□□□□□ -1.8
CSDE1-216ENST00000534389 ST20-MTHFSA0A0A6YYL1 179 aa3.81□□□□□ -1.8
CSDE1-216ENST00000534389 TRAV20A0A0B4J274 112 aa3.81□□□□□ -1.8
CSDE1-216ENST00000534389 A0A1W2PQJ5 194 aa3.81□□□□□ -1.8
CSDE1-216ENST00000534389 SHISA3A0PJX4 238 aa3.81□□□□□ -1.8
CSDE1-216ENST00000534389 FAM221BA6H8Z2 402 aa3.81□□□□□ -1.8
CSDE1-216ENST00000534389 H0Y8X5 98 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms