RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 RBM47A0AV96 593 aaKnown RBP15.65■□□□□ 0.1
CAPN1-228ENST00000534373 DYNC1LI2O43237 492 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-228ENST00000534373 CALML3P27482 149 aa15.65■□□□□ 0.1
CAPN1-228ENST00000534373 FSCN1Q16658 493 aaKnown RBP15.65■□□□□ 0.1
CAPN1-228ENST00000534373 DUSP28Q4G0W2 176 aa15.65■□□□□ 0.1
CAPN1-228ENST00000534373 FBXO16Q8IX29 292 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-228ENST00000534373 PURBQ96QR8 312 aaKnown RBP15.65■□□□□ 0.1
CAPN1-228ENST00000534373 PDGFCQ9NRA1 345 aa15.65■□□□□ 0.1
CAPN1-228ENST00000534373 ABCB11O95342 1321 aa15.65■□□□□ 0.1
CAPN1-228ENST00000534373 LTBP2Q14767 1821 aa15.64■□□□□ 0.09
CAPN1-228ENST00000534373 TLR3O15455 904 aaKnown RBP15.64■□□□□ 0.09
CAPN1-228ENST00000534373 SGSM2O43147 1006 aa15.64■□□□□ 0.09
CAPN1-228ENST00000534373 TIMP1P01033 207 aa15.64■□□□□ 0.09
CAPN1-228ENST00000534373 EDNRBP24530 442 aa15.64■□□□□ 0.09
CAPN1-228ENST00000534373 IRX5P78411 483 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-228ENST00000534373 SEC23AQ15436 765 aa15.64■□□□□ 0.09
CAPN1-228ENST00000534373 SHHQ15465 462 aa15.64■□□□□ 0.09
CAPN1-228ENST00000534373 CDC37Q16543 378 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-228ENST00000534373 EEPD1Q7L9B9 569 aa15.64■□□□□ 0.09
CAPN1-228ENST00000534373 MCF2L2Q86YR7 1114 aa15.64■□□□□ 0.09
CAPN1-228ENST00000534373 DEFB123Q8N688 67 aa15.64■□□□□ 0.09
CAPN1-228ENST00000534373 SLC43A3Q8NBI5 491 aa15.64■□□□□ 0.09
CAPN1-228ENST00000534373 WDR11Q9BZH6 1224 aa15.64■□□□□ 0.09
CAPN1-228ENST00000534373 NKRFO15226 690 aaKnown RBP eCLIP15.63■□□□□ 0.09
CAPN1-228ENST00000534373 CYP21A2P08686 494 aa15.63■□□□□ 0.09
CAPN1-228ENST00000534373 ITGB8P26012 769 aa15.63■□□□□ 0.09
CAPN1-228ENST00000534373 BEX3Q00994 111 aa15.63■□□□□ 0.09
CAPN1-228ENST00000534373 PTH1RQ03431 593 aa15.63■□□□□ 0.09
CAPN1-228ENST00000534373 PDE4DQ08499 809 aa15.63■□□□□ 0.09
CAPN1-228ENST00000534373 SLC30A10Q6XR72 485 aa15.63■□□□□ 0.09
CAPN1-228ENST00000534373 MAP4K1Q92918 833 aa15.63■□□□□ 0.09
CAPN1-228ENST00000534373 TBX21Q9UL17 535 aa15.63■□□□□ 0.09
CAPN1-228ENST00000534373 MRPL11Q9Y3B7 192 aaKnown RBP15.63■□□□□ 0.09
CAPN1-228ENST00000534373 ERICH2A1L162 156 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 FPGSQ05932 587 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 TRAF1Q13077 416 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 SART3Q15020 963 aaKnown RBP15.62■□□□□ 0.09
CAPN1-228ENST00000534373 USH1GQ495M9 461 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 CXCL17Q6UXB2 119 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 CYB5R4Q7L1T6 521 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 FBXO11Q86XK2 927 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 FAM126BQ8IXS8 530 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 SAMD3Q8N6K7 520 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 NCOA7Q8NI08 942 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 CPVLQ9H3G5 476 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 JMJD4Q9H9V9 463 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 MTMR10Q9NXD2 777 aa15.62■□□□□ 0.09
CAPN1-228ENST00000534373 MAP3K20Q9NYL2 800 aaKnown RBP15.62■□□□□ 0.09
CAPN1-228ENST00000534373 DDX49Q9Y6V7 483 aaKnown RBP15.62■□□□□ 0.09
CAPN1-228ENST00000534373 PALM3A6NDB9 673 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-228ENST00000534373 KLRF2D3W0D1 207 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 DHX16O60231 1041 aaKnown RBP15.61■□□□□ 0.09
CAPN1-228ENST00000534373 CD4P01730 458 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 CPT1AP50416 773 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 ITGA7Q13683 1181 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 QRICH1Q2TAL8 776 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 BRDTQ58F21 947 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-228ENST00000534373 C9orf50Q5SZB4 431 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 MFSD5Q6N075 450 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 RALYLQ86SE5 291 aaKnown RBP15.61■□□□□ 0.09
CAPN1-228ENST00000534373 NSUN6Q8TEA1 469 aaKnown RBP15.61■□□□□ 0.09
CAPN1-228ENST00000534373 SCFD2Q8WU76 684 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 MTMR8Q96EF0 704 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 IWS1Q96ST2 819 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 MTA3Q9BTC8 594 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 AMNQ9BXJ7 453 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 VAT1LQ9HCJ6 419 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 POLR3EQ9NVU0 708 aa15.61■□□□□ 0.09
CAPN1-228ENST00000534373 LCTP09848 1927 aa15.6■□□□□ 0.09
CAPN1-228ENST00000534373 E7EWF7 191 aa15.6■□□□□ 0.09
CAPN1-228ENST00000534373 IFIT3O14879 490 aaKnown RBP15.6■□□□□ 0.09
CAPN1-228ENST00000534373 KPNA6O60684 536 aa15.6■□□□□ 0.09
CAPN1-228ENST00000534373 SMAD3P84022 425 aaKnown RBP15.6■□□□□ 0.09
CAPN1-228ENST00000534373 STAG2Q8N3U4 1231 aa15.6■□□□□ 0.09
CAPN1-228ENST00000534373 SYTL5Q8TDW5 730 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-228ENST00000534373 MAD2L2Q9UI95 211 aa15.6■□□□□ 0.09
CAPN1-228ENST00000534373 ZBTB5O15062 677 aa15.59■□□□□ 0.09
CAPN1-228ENST00000534373 GHRHRQ02643 423 aa15.59■□□□□ 0.09
CAPN1-228ENST00000534373 PPIGQ13427 754 aaKnown RBP eCLIP15.59■□□□□ 0.092e-6■■■□□ 16.9
CAPN1-228ENST00000534373 TTLL4Q14679 1199 aa15.59■□□□□ 0.09
CAPN1-228ENST00000534373 PPP2R5BQ15173 497 aa15.59■□□□□ 0.09
CAPN1-228ENST00000534373 TMEM63BQ5T3F8 832 aa15.59■□□□□ 0.09
CAPN1-228ENST00000534373 TMEM199Q8N511 208 aa15.59■□□□□ 0.09
CAPN1-228ENST00000534373 TBC1D5Q92609 795 aa15.59■□□□□ 0.09
CAPN1-228ENST00000534373 STXBP5LQ9Y2K9 1186 aa15.59■□□□□ 0.09
CAPN1-228ENST00000534373 LRRC37A2A6NM11 1700 aa15.59■□□□□ 0.09
CAPN1-228ENST00000534373 A6NJR5 290 aa15.58■□□□□ 0.08
CAPN1-228ENST00000534373 TXNP10599 105 aaKnown RBP15.58■□□□□ 0.08
CAPN1-228ENST00000534373 EPHB4P54760 987 aa15.58■□□□□ 0.08
CAPN1-228ENST00000534373 PURAQ00577 322 aaKnown RBP15.58■□□□□ 0.08
CAPN1-228ENST00000534373 TROAPQ12815 778 aa15.58■□□□□ 0.08
CAPN1-228ENST00000534373 GRM4Q14833 912 aa15.58■□□□□ 0.08
CAPN1-228ENST00000534373 WTAPQ15007 396 aa15.58■□□□□ 0.08
CAPN1-228ENST00000534373 STXBP2Q15833 593 aa15.58■□□□□ 0.08
CAPN1-228ENST00000534373 Q7L0L9 218 aa15.58■□□□□ 0.08
CAPN1-228ENST00000534373 OR6J1Q8NGC5 347 aa15.58■□□□□ 0.08
CAPN1-228ENST00000534373 RNPC3Q96LT9 517 aaKnown RBP15.58■□□□□ 0.08
CAPN1-228ENST00000534373 TAAR1Q96RJ0 339 aa15.58■□□□□ 0.08
CAPN1-228ENST00000534373 RMDN3Q96TC7 470 aa15.58■□□□□ 0.08
CAPN1-228ENST00000534373 MAP3K14Q99558 947 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms