RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 POLR3EQ9NVU0 708 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 FBXO40Q9UH90 709 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 COG6Q9Y2V7 657 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 COL4A6Q14031 1691 aa12.29□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 ASB14A6NK59 587 aa12.28□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 MBTPS2O43462 519 aa12.28□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 LTBRP36941 435 aa12.28□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 GPM6BQ13491 265 aa12.28□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 MTX1Q13505 466 aa12.28□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 GPNMBQ14956 572 aa12.28□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 SMAD2Q15796 467 aaKnown RBP12.28□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 EPC2Q52LR7 807 aa12.28□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 FAM133AQ8N9E0 248 aa12.28□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 CHST13Q8NET6 341 aa12.28□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 CCDC17Q96LX7 622 aa12.28□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 DBNLQ9UJU6 430 aaKnown RBP12.28□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 NAV1Q8NEY1 1877 aa12.27□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 DMXL1Q9Y485 3027 aa12.27□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 ZFHX4Q86UP3 3567 aa12.27□□□□□ -0.44
NEDD8-MDP1-202ENST00000534348 MED19A0JLT2 244 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 USP17L12C9JPN9 530 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 USP17L21D6R901 530 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 F5H6K3 240 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 ATP2A1O14983 1001 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 PRKAB2O43741 272 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 GNAI3P08754 354 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 AVPR2P30518 371 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 ZXDAP98168 799 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 KLRC3Q07444 240 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 CNKSR3Q6P9H4 555 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.27□□□□□ -0.457e-16■■■□□ 19.1
NEDD8-MDP1-202ENST00000534348 STK11IPQ8N1F8 1099 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 LCORLQ8N3X6 602 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 CHMP4CQ96CF2 233 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 ZNF512BQ96KM6 892 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 PURBQ96QR8 312 aaKnown RBP12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 FSD1Q9BTV5 496 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 IRF2BPLQ9H1B7 796 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 NSUN3Q9H649 340 aaKnown RBP12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 IGFLR1Q9H665 355 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 SLC38A10Q9HBR0 1119 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 A1CFQ9NQ94 594 aaKnown RBP12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 ISY1Q9ULR0 285 aaKnown RBP12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 Q9Y3F1 56 aa12.27□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 SIP14410 1827 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 PRR23AA6NEV1 266 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 NBNO60934 754 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 IGSF3O75054 1194 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 NDUFB10O96000 172 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 CPT1AP50416 773 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 PTGISQ16647 500 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 SLC9C2Q5TAH2 1124 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 MYOCDQ8IZQ8 938 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 OR6J1Q8NGC5 347 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 ACAD9Q9H845 621 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 ARMT1Q9H993 441 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 GPR108Q9NPR9 543 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 INSL6Q9Y581 213 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 FAM186AA6NE01 2351 aa12.26□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 ABHD14A-ACY1A0A1B0GW23 586 aa12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 GTF2F1P35269 517 aaKnown RBP eCLIP12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 IKBKEQ14164 716 aa12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 LRRFIP1Q32MZ4 808 aaKnown RBP12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 DUSP28Q4G0W2 176 aa12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 NFRKBQ6P4R8 1299 aa12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 LRRC8DQ7L1W4 858 aa12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 AFAP1L1Q8TED9 768 aa12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 WDR11Q9BZH6 1224 aa12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 API5Q9BZZ5 524 aaKnown RBP12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 RNF146Q9NTX7 359 aa12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 ZNF532Q9HCE3 1301 aa12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 DNAH14Q0VDD8 3507 aa12.25□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 H3BNC9 293 aa12.24□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 SELPP16109 830 aa12.24□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 PDE6AP16499 860 aa12.24□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 MYO7AQ13402 2215 aa12.24□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 ALDH1L2Q3SY69 923 aa12.24□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.24□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 ADSSL1Q8N142 457 aa12.24□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 CCDC155Q8N6L0 562 aa12.24□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.24□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 PLXNA3P51805 1871 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 KMT2EQ8IZD2 1858 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 TANC1Q9C0D5 1861 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 PROB1E7EW31 1015 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 LINC01565O15544 149 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 SURF6O75683 361 aaKnown RBP12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 UPP2O95045 317 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 PDGFBP01127 241 aaPredicted RBP12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 GNAI2P04899 355 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 ALAS1P13196 640 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 SNAP25P60880 206 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 HYAL1Q12794 435 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 SMAD4Q13485 552 aaKnown RBP12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 COL19A1Q14993 1142 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 SLFNL1Q499Z3 407 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 BRDTQ58F21 947 aaPredicted RBP12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 C12orf60Q5U649 245 aa12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 GDF6Q6KF10 455 aaPredicted RBP12.23□□□□□ -0.45
NEDD8-MDP1-202ENST00000534348 C16orf86Q6ZW13 317 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms