RNA–Protein interactions for RNA: ENST00000534055.1

AP001360.1-201, humanhuman

TSL 2 BASIC

Gene AP001360.1, Length 518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001360.1-201ENST00000534055 CPXCR1Q8N123 301 aa11.9□□□□□ -0.5
AP001360.1-201ENST00000534055 REPS2Q8NFH8 660 aa11.9□□□□□ -0.5
AP001360.1-201ENST00000534055 AFAP1L1Q8TED9 768 aa11.9□□□□□ -0.5
AP001360.1-201ENST00000534055 FGD4Q96M96 766 aa11.9□□□□□ -0.5
AP001360.1-201ENST00000534055 USP44Q9H0E7 712 aa11.9□□□□□ -0.5
AP001360.1-201ENST00000534055 SNRKQ9NRH2 765 aa11.9□□□□□ -0.5
AP001360.1-201ENST00000534055 TMX2Q9Y320 296 aa11.9□□□□□ -0.5
AP001360.1-201ENST00000534055 RIPK3Q9Y572 518 aa11.9□□□□□ -0.5
AP001360.1-201ENST00000534055 TET1Q8NFU7 2136 aa11.9□□□□□ -0.5
AP001360.1-201ENST00000534055 LMNAP02545 664 aaKnown RBP11.89□□□□□ -0.51
AP001360.1-201ENST00000534055 ICAM3P32942 547 aa11.89□□□□□ -0.51
AP001360.1-201ENST00000534055 GTF2F1P35269 517 aaKnown RBP eCLIP11.89□□□□□ -0.51
AP001360.1-201ENST00000534055 PURAQ00577 322 aaKnown RBP11.89□□□□□ -0.51
AP001360.1-201ENST00000534055 TFCP2Q12800 502 aa11.89□□□□□ -0.51
AP001360.1-201ENST00000534055 LRRC8DQ7L1W4 858 aa11.89□□□□□ -0.51
AP001360.1-201ENST00000534055 EEPD1Q7L9B9 569 aa11.89□□□□□ -0.51
AP001360.1-201ENST00000534055 MIGA1Q8NAN2 632 aa11.89□□□□□ -0.51
AP001360.1-201ENST00000534055 YME1L1Q96TA2 773 aa11.89□□□□□ -0.51
AP001360.1-201ENST00000534055 MTG1Q9BT17 334 aaPredicted RBP11.89□□□□□ -0.51
AP001360.1-201ENST00000534055 DLL3Q9NYJ7 618 aa11.89□□□□□ -0.51
AP001360.1-201ENST00000534055 Q9Y3F1 56 aa11.89□□□□□ -0.51
AP001360.1-201ENST00000534055 ASB14A6NK59 587 aa11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 AMHP03971 560 aa11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 UQCRFS1P1P0C7P4 283 aa11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 SELPP16109 830 aa11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 CYP7A1P22680 504 aa11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 RSPO4Q2I0M5 234 aaPredicted RBP11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 FAM83BQ5T0W9 1011 aa11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 IQSEC1Q6DN90 963 aa11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 FBXO16Q8IX29 292 aaPredicted RBP11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 CAGE1Q8TC20 777 aa11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 PHF7Q9BWX1 381 aaPredicted RBP11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 MFSD1Q9H3U5 465 aa11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 PCDHGC5Q9Y5F6 944 aa11.88□□□□□ -0.51
AP001360.1-201ENST00000534055 PARNO95453 639 aaKnown RBP11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 EYA4O95677 639 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 CTNNB1P35222 781 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 CPT1AP50416 773 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 RRP1P56182 461 aaKnown RBP11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 PTGISQ16647 500 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 TCTN1Q2MV58 587 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 NFRKBQ6P4R8 1299 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 CERS3Q8IU89 383 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 SLF1Q9BQI6 1058 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 GOPCQ9HD26 462 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 PDGFCQ9NRA1 345 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 SH2B1Q9NRF2 756 aaPredicted RBP11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 HOMER2Q9NSB8 354 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 FBXO40Q9UH90 709 aa11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 USP15Q9Y4E8 981 aaPredicted RBP11.87□□□□□ -0.51
AP001360.1-201ENST00000534055 CHD6Q8TD26 2715 aa11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 NBNO60934 754 aa11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 CXCL10P02778 98 aa11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 HTRA4P83105 476 aaPredicted RBP11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 BRDTQ58F21 947 aaPredicted RBP11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 TMEM63BQ5T3F8 832 aa11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 ASTLQ6HA08 431 aaPredicted RBP11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 KIAA1211Q6ZU35 1233 aa11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 FAM133AQ8N9E0 248 aa11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 SMRP1Q8NCR6 262 aa11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 PPP2R3CQ969Q6 453 aa11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 RAVER2Q9HCJ3 691 aaKnown RBP11.86□□□□□ -0.51
AP001360.1-201ENST00000534055 ZBED4O75132 1171 aa11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 UBTFL1P0CB47 393 aaPredicted RBP11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 HOXB3P14651 431 aaPredicted RBP11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 PTPN11Q06124 597 aaPredicted RBP11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 GABPAQ06546 454 aa11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 ADAM15Q13444 863 aa11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 GPNMBQ14956 572 aa11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 TTC39AQ5SRH9 613 aa11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 KIAA0319Q5VV43 1072 aa11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 CHST13Q8NET6 341 aa11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 OR6J1Q8NGC5 347 aa11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 MSLNLQ96KJ4 702 aa11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 C11orf84Q9BUA3 381 aaPredicted RBP11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 LMAN2LQ9H0V9 348 aa11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 COPRSQ9NQ92 184 aa11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 COG6Q9Y2V7 657 aa11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 DDX49Q9Y6V7 483 aaKnown RBP11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 MAP1BP46821 2468 aaKnown RBP11.85□□□□□ -0.51
AP001360.1-201ENST00000534055 USP17L12C9JPN9 530 aa11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 USP17L21D6R901 530 aa11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 UPP2O95045 317 aa11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 AKR1B1P15121 316 aa11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 SP100P23497 879 aaPredicted RBP11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 MTMR3Q13615 1198 aa11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 ANGPT1Q15389 498 aa11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 SIAH1Q8IUQ4 282 aa11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 CYP2W1Q8TAV3 490 aa11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 HAUS7Q99871 368 aa11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 SEMA4AQ9H3S1 761 aa11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 MCM9Q9NXL9 1143 aa11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 RAD50Q92878 1312 aa11.84□□□□□ -0.51
AP001360.1-201ENST00000534055 NLRC5Q86WI3 1866 aa11.83□□□□□ -0.52
AP001360.1-201ENST00000534055 DNAH14Q0VDD8 3507 aa11.83□□□□□ -0.52
AP001360.1-201ENST00000534055 GRM6O15303 877 aa11.83□□□□□ -0.52
AP001360.1-201ENST00000534055 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms