RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 RBM28Q9NW13 759 aaKnown RBP15.5■□□□□ 0.07
CAPN1-227ENST00000533909 MYH6P13533 1939 aa15.5■□□□□ 0.07
CAPN1-227ENST00000533909 TNRC18O15417 2968 aaPredicted RBP15.5■□□□□ 0.07
CAPN1-227ENST00000533909 LOC102724159A0A0B4J2E5 919 aa15.49■□□□□ 0.07
CAPN1-227ENST00000533909 DNM1LO00429 736 aa15.49■□□□□ 0.07
CAPN1-227ENST00000533909 ZNF865P0CJ78 1059 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-227ENST00000533909 CPA1P15085 419 aa15.49■□□□□ 0.07
CAPN1-227ENST00000533909 ALDH5A1P51649 535 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-227ENST00000533909 PWP2Q15269 919 aaKnown RBP15.49■□□□□ 0.07
CAPN1-227ENST00000533909 RTN1Q16799 776 aa15.49■□□□□ 0.07
CAPN1-227ENST00000533909 CCDC144BQ3MJ40 725 aa15.49■□□□□ 0.07
CAPN1-227ENST00000533909 APOA5Q6Q788 366 aa15.49■□□□□ 0.07
CAPN1-227ENST00000533909 Q6ZUG5 572 aa15.49■□□□□ 0.07
CAPN1-227ENST00000533909 EEPD1Q7L9B9 569 aa15.49■□□□□ 0.07
CAPN1-227ENST00000533909 UBE2Q1Q7Z7E8 422 aa15.49■□□□□ 0.07
CAPN1-227ENST00000533909 MTMR8Q96EF0 704 aa15.49■□□□□ 0.07
CAPN1-227ENST00000533909 PURBQ96QR8 312 aaKnown RBP15.49■□□□□ 0.07
CAPN1-227ENST00000533909 NR2E3Q9Y5X4 410 aa15.49■□□□□ 0.07
CAPN1-227ENST00000533909 CYP46A1Q9Y6A2 500 aa15.49■□□□□ 0.07
CAPN1-227ENST00000533909 BAZ2BQ9UIF8 2168 aaKnown RBP15.48■□□□□ 0.07
CAPN1-227ENST00000533909 GOLGA8AA7E2F4 631 aa15.48■□□□□ 0.07
CAPN1-227ENST00000533909 GOLGA8BA8MQT2 603 aa15.48■□□□□ 0.07
CAPN1-227ENST00000533909 CYTH3O43739 400 aa15.48■□□□□ 0.07
CAPN1-227ENST00000533909 EVI5O60447 810 aa15.48■□□□□ 0.07
CAPN1-227ENST00000533909 PLEKHA8P1O95397 391 aa15.48■□□□□ 0.07
CAPN1-227ENST00000533909 RPS6KB1P23443 525 aa15.48■□□□□ 0.07
CAPN1-227ENST00000533909 SMARCA1P28370 1054 aa15.48■□□□□ 0.07
CAPN1-227ENST00000533909 GJC2Q5T442 439 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-227ENST00000533909 CCDC82Q8N4S0 544 aa15.48■□□□□ 0.07
CAPN1-227ENST00000533909 DNERQ8NFT8 737 aa15.48■□□□□ 0.07
CAPN1-227ENST00000533909 NSUN6Q8TEA1 469 aaKnown RBP15.48■□□□□ 0.07
CAPN1-227ENST00000533909 BRF1Q92994 677 aa15.48■□□□□ 0.07
CAPN1-227ENST00000533909 VTA1Q9NP79 307 aa15.48■□□□□ 0.07
CAPN1-227ENST00000533909 SMCHD1A6NHR9 2005 aa15.48■□□□□ 0.07
CAPN1-227ENST00000533909 CCDC196A0A1B0GTZ2 297 aa15.47■□□□□ 0.07
CAPN1-227ENST00000533909 PPP1R11O60927 126 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-227ENST00000533909 PGK1P00558 417 aa15.47■□□□□ 0.07
CAPN1-227ENST00000533909 TNFAIP2Q03169 654 aa15.47■□□□□ 0.07
CAPN1-227ENST00000533909 ARHGEF16Q5VV41 709 aa15.47■□□□□ 0.07
CAPN1-227ENST00000533909 TMTC3Q6ZXV5 915 aa15.47■□□□□ 0.07
CAPN1-227ENST00000533909 FBXO16Q8IX29 292 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-227ENST00000533909 CMTR1Q8N1G2 835 aaKnown RBP15.47■□□□□ 0.07
CAPN1-227ENST00000533909 SRBD1Q8N5C6 995 aaKnown RBP15.47■□□□□ 0.07
CAPN1-227ENST00000533909 SYTL5Q8TDW5 730 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-227ENST00000533909 LENG1Q96BZ8 264 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-227ENST00000533909 RMDN3Q96TC7 470 aa15.47■□□□□ 0.07
CAPN1-227ENST00000533909 SENP6Q9GZR1 1112 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-227ENST00000533909 BRPF3Q9ULD4 1205 aa15.47■□□□□ 0.07
CAPN1-227ENST00000533909 MCM3APO60318 1980 aa15.46■□□□□ 0.07
CAPN1-227ENST00000533909 GCOM1H8Y6P7 765 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-227ENST00000533909 DUSP11O75319 330 aaKnown RBP15.46■□□□□ 0.07
CAPN1-227ENST00000533909 C6orf222P0C671 652 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-227ENST00000533909 POLR2MP0CAP2 368 aa15.46■□□□□ 0.07
CAPN1-227ENST00000533909 METAP2P50579 478 aaKnown RBP eCLIP15.46■□□□□ 0.073e-8■■■■■ 34.2
CAPN1-227ENST00000533909 APOBRQ0VD83 1088 aa15.46■□□□□ 0.07
CAPN1-227ENST00000533909 LRRC41Q15345 812 aa15.46■□□□□ 0.07
CAPN1-227ENST00000533909 SLC35G1Q2M3R5 365 aa15.46■□□□□ 0.07
CAPN1-227ENST00000533909 RUFY3Q7L099 469 aa15.46■□□□□ 0.07
CAPN1-227ENST00000533909 CUL5Q93034 780 aa15.46■□□□□ 0.07
CAPN1-227ENST00000533909 AP5M1Q9H0R1 490 aa15.46■□□□□ 0.07
CAPN1-227ENST00000533909 MAP3K20Q9NYL2 800 aaKnown RBP15.46■□□□□ 0.07
CAPN1-227ENST00000533909 DDX49Q9Y6V7 483 aaKnown RBP15.46■□□□□ 0.07
CAPN1-227ENST00000533909 ASTN1O14525 1302 aa15.45■□□□□ 0.06
CAPN1-227ENST00000533909 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
CAPN1-227ENST00000533909 EIF2AK2P19525 551 aaKnown RBP15.45■□□□□ 0.06
CAPN1-227ENST00000533909 HOXA13P31271 388 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-227ENST00000533909 ADCYAP1R1P41586 468 aa15.45■□□□□ 0.06
CAPN1-227ENST00000533909 MNX1P50219 401 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-227ENST00000533909 RCAN1P53805 252 aa15.45■□□□□ 0.06
CAPN1-227ENST00000533909 PPP2R5BQ15173 497 aa15.45■□□□□ 0.06
CAPN1-227ENST00000533909 PRPF38BQ5VTL8 546 aaKnown RBP15.45■□□□□ 0.06
CAPN1-227ENST00000533909 IQSEC1Q6DN90 963 aa15.45■□□□□ 0.06
CAPN1-227ENST00000533909 HEATR3Q7Z4Q2 680 aa15.45■□□□□ 0.06
CAPN1-227ENST00000533909 SAMD3Q8N6K7 520 aa15.45■□□□□ 0.06
CAPN1-227ENST00000533909 MORC4Q8TE76 937 aa15.45■□□□□ 0.06
CAPN1-227ENST00000533909 TBC1D5Q92609 795 aa15.45■□□□□ 0.06
CAPN1-227ENST00000533909 FRMPD3Q5JV73 1810 aa15.45■□□□□ 0.06
CAPN1-227ENST00000533909 hCG_1642624A0A1W2PR95 340 aa15.44■□□□□ 0.06
CAPN1-227ENST00000533909 ATN1P54259 1190 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-227ENST00000533909 FCHSD1Q86WN1 690 aa15.44■□□□□ 0.06
CAPN1-227ENST00000533909 PCSK9Q8NBP7 692 aaKnown RBP15.44■□□□□ 0.06
CAPN1-227ENST00000533909 FERMT2Q96AC1 680 aa15.44■□□□□ 0.06
CAPN1-227ENST00000533909 TAAR1Q96RJ0 339 aa15.44■□□□□ 0.06
CAPN1-227ENST00000533909 IWS1Q96ST2 819 aa15.44■□□□□ 0.06
CAPN1-227ENST00000533909 WDR11Q9BZH6 1224 aa15.44■□□□□ 0.06
CAPN1-227ENST00000533909 UPF3BQ9BZI7 483 aaKnown RBP15.44■□□□□ 0.06
CAPN1-227ENST00000533909 TM6SF1Q9BZW5 370 aa15.44■□□□□ 0.06
CAPN1-227ENST00000533909 KATNBL1Q9H079 304 aa15.44■□□□□ 0.06
CAPN1-227ENST00000533909 ZSWIM6Q9HCJ5 1215 aa15.44■□□□□ 0.06
CAPN1-227ENST00000533909 COL6A1P12109 1028 aa15.43■□□□□ 0.06
CAPN1-227ENST00000533909 HSD17B4P51659 736 aa15.43■□□□□ 0.06
CAPN1-227ENST00000533909 AKAP17AQ02040 695 aaKnown RBP15.43■□□□□ 0.06
CAPN1-227ENST00000533909 STXBP2Q15833 593 aa15.43■□□□□ 0.06
CAPN1-227ENST00000533909 GNASQ5JWF2 1037 aa15.43■□□□□ 0.06
CAPN1-227ENST00000533909 TLK2Q86UE8 772 aa15.43■□□□□ 0.06
CAPN1-227ENST00000533909 C7orf61Q8IZ16 206 aa15.43■□□□□ 0.06
CAPN1-227ENST00000533909 SMARCC2Q8TAQ2 1214 aa15.43■□□□□ 0.06
CAPN1-227ENST00000533909 SCFD2Q8WU76 684 aa15.43■□□□□ 0.06
CAPN1-227ENST00000533909 VTI1AQ96AJ9 217 aa15.43■□□□□ 0.06
CAPN1-227ENST00000533909 PDGFCQ9NRA1 345 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms