RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 KRT23Q9C075 422 aa20.42■□□□□ 0.86
VPS51-213ENST00000533827 UBA5Q9GZZ9 404 aa20.42■□□□□ 0.86
VPS51-213ENST00000533827 AP5M1Q9H0R1 490 aa20.42■□□□□ 0.86
VPS51-213ENST00000533827 CPVLQ9H3G5 476 aa20.42■□□□□ 0.86
VPS51-213ENST00000533827 KAT14Q9H8E8 782 aa20.42■□□□□ 0.86
VPS51-213ENST00000533827 STXBP5LQ9Y2K9 1186 aa20.42■□□□□ 0.86
VPS51-213ENST00000533827 CABYRO75952 493 aa20.41■□□□□ 0.86
VPS51-213ENST00000533827 CALML3P27482 149 aa20.41■□□□□ 0.86
VPS51-213ENST00000533827 RPS6P62753 249 aaKnown RBP20.41■□□□□ 0.86
VPS51-213ENST00000533827 FPGSQ05932 587 aa20.41■□□□□ 0.86
VPS51-213ENST00000533827 CXCL17Q6UXB2 119 aa20.41■□□□□ 0.86
VPS51-213ENST00000533827 SLC43A3Q8NBI5 491 aa20.41■□□□□ 0.86
VPS51-213ENST00000533827 CNNM2Q9H8M5 875 aa20.41■□□□□ 0.86
VPS51-213ENST00000533827 TNKSO95271 1327 aa20.41■□□□□ 0.86
VPS51-213ENST00000533827 RBM47A0AV96 593 aaKnown RBP20.4■□□□□ 0.86
VPS51-213ENST00000533827 DUSP28Q4G0W2 176 aa20.4■□□□□ 0.86
VPS51-213ENST00000533827 RGS22Q8NE09 1264 aa20.4■□□□□ 0.86
VPS51-213ENST00000533827 RAD50Q92878 1312 aa20.4■□□□□ 0.86
VPS51-213ENST00000533827 GRIN2DO15399 1336 aa20.39■□□□□ 0.85
VPS51-213ENST00000533827 ZEB2O60315 1214 aa20.39■□□□□ 0.85
VPS51-213ENST00000533827 CD4P01730 458 aa20.39■□□□□ 0.85
VPS51-213ENST00000533827 EDNRBP24530 442 aa20.39■□□□□ 0.85
VPS51-213ENST00000533827 IRX6P78412 446 aaPredicted RBP20.39■□□□□ 0.85
VPS51-213ENST00000533827 SMAD3P84022 425 aaKnown RBP20.39■□□□□ 0.85
VPS51-213ENST00000533827 CDC37Q16543 378 aaPredicted RBP20.39■□□□□ 0.85
VPS51-213ENST00000533827 USH1GQ495M9 461 aa20.39■□□□□ 0.85
VPS51-213ENST00000533827 ASPRV1Q53RT3 343 aa20.39■□□□□ 0.85
VPS51-213ENST00000533827 MFSD5Q6N075 450 aa20.39■□□□□ 0.85
VPS51-213ENST00000533827 ADGRF4Q8IZF3 695 aa20.39■□□□□ 0.85
VPS51-213ENST00000533827 DNERQ8NFT8 737 aa20.39■□□□□ 0.85
VPS51-213ENST00000533827 GUCD1Q96NT3 240 aa20.39■□□□□ 0.85
VPS51-213ENST00000533827 TLR3O15455 904 aaKnown RBP20.38■□□□□ 0.85
VPS51-213ENST00000533827 RNPC3Q96LT9 517 aaKnown RBP20.38■□□□□ 0.85
VPS51-213ENST00000533827 WDR11Q9BZH6 1224 aa20.38■□□□□ 0.85
VPS51-213ENST00000533827 MAF1Q9H063 256 aa20.38■□□□□ 0.85
VPS51-213ENST00000533827 PARP1P09874 1014 aaKnown RBP20.37■□□□□ 0.85
VPS51-213ENST00000533827 CHMLP26374 656 aa20.37■□□□□ 0.85
VPS51-213ENST00000533827 ITGA7Q13683 1181 aa20.37■□□□□ 0.85
VPS51-213ENST00000533827 SEC23AQ15436 765 aa20.37■□□□□ 0.85
VPS51-213ENST00000533827 ZNF697Q5TEC3 545 aa20.37■□□□□ 0.85
VPS51-213ENST00000533827 SLC17A8Q8NDX2 589 aa20.37■□□□□ 0.85
VPS51-213ENST00000533827 MPHOSPH6Q99547 160 aaKnown RBP20.37■□□□□ 0.85
VPS51-213ENST00000533827 UBAC1Q9BSL1 405 aa20.37■□□□□ 0.85
VPS51-213ENST00000533827 SEZ6LQ9BYH1 1024 aa20.37■□□□□ 0.85
VPS51-213ENST00000533827 ABCB11O95342 1321 aa20.36■□□□□ 0.85
VPS51-213ENST00000533827 PDE4DQ08499 809 aa20.36■□□□□ 0.85
VPS51-213ENST00000533827 IFIT1BQ5T764 474 aaKnown RBP20.36■□□□□ 0.85
VPS51-213ENST00000533827 CYB5R4Q7L1T6 521 aa20.36■□□□□ 0.85
VPS51-213ENST00000533827 RUFY2Q8WXA3 655 aa20.36■□□□□ 0.85
VPS51-213ENST00000533827 TBC1D5Q92609 795 aa20.36■□□□□ 0.85
VPS51-213ENST00000533827 FAM161BQ96MY7 647 aa20.36■□□□□ 0.85
VPS51-213ENST00000533827 JMJD4Q9H9V9 463 aa20.36■□□□□ 0.85
VPS51-213ENST00000533827 CYP21A2P08686 494 aa20.35■□□□□ 0.85
VPS51-213ENST00000533827 PSMC6P62333 389 aa20.35■□□□□ 0.85
VPS51-213ENST00000533827 PTH1RQ03431 593 aa20.35■□□□□ 0.85
VPS51-213ENST00000533827 PPIGQ13427 754 aaKnown RBP eCLIP20.35■□□□□ 0.859e-6■■□□□ 12.8
VPS51-213ENST00000533827 QRICH1Q2TAL8 776 aa20.35■□□□□ 0.85
VPS51-213ENST00000533827 C16orf59Q7L2K0 433 aa20.35■□□□□ 0.85
VPS51-213ENST00000533827 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.35■□□□□ 0.85
VPS51-213ENST00000533827 PPP1R12CQ9BZL4 782 aa20.35■□□□□ 0.85
VPS51-213ENST00000533827 NKRFO15226 690 aaKnown RBP eCLIP20.34■□□□□ 0.85
VPS51-213ENST00000533827 STAG2Q8N3U4 1231 aa20.34■□□□□ 0.85
VPS51-213ENST00000533827 TMEM199Q8N511 208 aa20.34■□□□□ 0.85
VPS51-213ENST00000533827 SCFD2Q8WU76 684 aa20.34■□□□□ 0.85
VPS51-213ENST00000533827 SEMA6BQ9H3T3 888 aa20.34■□□□□ 0.85
VPS51-213ENST00000533827 POLR3EQ9NVU0 708 aa20.34■□□□□ 0.85
VPS51-213ENST00000533827 B4DLN1 442 aa20.33■□□□□ 0.85
VPS51-213ENST00000533827 CSF2RAP15509 400 aa20.33■□□□□ 0.85
VPS51-213ENST00000533827 CPT1AP50416 773 aa20.33■□□□□ 0.85
VPS51-213ENST00000533827 MRPL12P52815 198 aaKnown RBP20.33■□□□□ 0.85
VPS51-213ENST00000533827 PURAQ00577 322 aaKnown RBP20.33■□□□□ 0.85
VPS51-213ENST00000533827 FBXO11Q86XK2 927 aa20.33■□□□□ 0.85
VPS51-213ENST00000533827 OR6J1Q8NGC5 347 aa20.33■□□□□ 0.85
VPS51-213ENST00000533827 SYTL5Q8TDW5 730 aaPredicted RBP20.33■□□□□ 0.85
VPS51-213ENST00000533827 TAAR1Q96RJ0 339 aa20.33■□□□□ 0.85
VPS51-213ENST00000533827 TTYH1Q9H313 450 aaPredicted RBP20.33■□□□□ 0.85
VPS51-213ENST00000533827 VAT1LQ9HCJ6 419 aa20.33■□□□□ 0.85
VPS51-213ENST00000533827 COL20A1Q9P218 1284 aa20.33■□□□□ 0.85
VPS51-213ENST00000533827 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
VPS51-213ENST00000533827 MYH6P13533 1939 aa20.32■□□□□ 0.84
VPS51-213ENST00000533827 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.32■□□□□ 0.84
VPS51-213ENST00000533827 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.32■□□□□ 0.84
VPS51-213ENST00000533827 SGSM2O43147 1006 aa20.32■□□□□ 0.84
VPS51-213ENST00000533827 DHX16O60231 1041 aaKnown RBP20.32■□□□□ 0.84
VPS51-213ENST00000533827 B4GALT4O60513 344 aa20.32■□□□□ 0.84
VPS51-213ENST00000533827 CYP2C18P33260 490 aa20.32■□□□□ 0.84
VPS51-213ENST00000533827 TRDNQ13061 729 aa20.32■□□□□ 0.84
VPS51-213ENST00000533827 PPP2R5BQ15173 497 aa20.32■□□□□ 0.84
VPS51-213ENST00000533827 TMEM240Q5SV17 173 aa20.32■□□□□ 0.84
VPS51-213ENST00000533827 RASIP1Q5U651 963 aa20.32■□□□□ 0.84
VPS51-213ENST00000533827 MCF2L2Q86YR7 1114 aa20.32■□□□□ 0.84
VPS51-213ENST00000533827 MTMR8Q96EF0 704 aa20.32■□□□□ 0.84
VPS51-213ENST00000533827 TRPV6Q9H1D0 765 aa20.32■□□□□ 0.84
VPS51-213ENST00000533827 MAD2L2Q9UI95 211 aa20.32■□□□□ 0.84
VPS51-213ENST00000533827 MRPL11Q9Y3B7 192 aaKnown RBP20.32■□□□□ 0.84
VPS51-213ENST00000533827 PALM3A6NDB9 673 aaPredicted RBP20.31■□□□□ 0.84
VPS51-213ENST00000533827 KLRF2D3W0D1 207 aa20.31■□□□□ 0.84
VPS51-213ENST00000533827 ARIH2O95376 493 aa20.31■□□□□ 0.84
VPS51-213ENST00000533827 NSUN6Q8TEA1 469 aaKnown RBP20.31■□□□□ 0.84
VPS51-213ENST00000533827 COPS5Q92905 334 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms