RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 FOXO4P98177 505 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 MKRN3Q13064 507 aaKnown RBP12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 SNAPC2Q13487 334 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 ME3Q16798 604 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 PI16Q6UXB8 463 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 PRPF38AQ8NAV1 312 aaKnown RBP12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 GABPB2Q8TAK5 448 aaPredicted RBP12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 MAK16Q9BXY0 300 aaKnown RBP12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 IQGAP1P46940 1657 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 ASB14A6NK59 587 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 TKFCQ3LXA3 575 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 DYMQ7RTS9 669 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 INO80BQ9C086 356 aaPredicted RBP12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 ADGRB1O14514 1584 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 K7ENM7 598 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 CSF1RP07333 972 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 C6orf163Q5TEZ5 329 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 LPAR1Q92633 364 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 DYNLL2Q96FJ2 89 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 CLSTN2Q9H4D0 955 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 ZFYVE28Q9HCC9 887 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 SEPT9Q9UHD8 586 aaPredicted RBP12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 MTUS1Q9ULD2 1270 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 RIPOR2Q9Y4F9 1068 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 LRRIQ4A6NIV6 560 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 JAK2O60674 1132 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 ZNF202O95125 648 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 JAK3P52333 1124 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 ADALQ6DHV7 355 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 KCNV1Q6PIU1 500 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 CCDC121Q6ZUS5 278 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 RGS22Q8NE09 1264 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 MYRIPQ8NFW9 859 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 PIGSQ96S52 555 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 SERPINA10Q9UK55 444 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 A0A1B0GUA9 196 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 PTGS1P23219 599 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 TECP42680 631 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 PPP2R3AQ06190 1150 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 NSUN6Q8TEA1 469 aaKnown RBP12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 OTUD5Q96G74 571 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 ERO1AQ96HE7 468 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 ZNF512BQ96KM6 892 aaPredicted RBP12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 CEP63Q96MT8 703 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 TMEM106CQ9BVX2 250 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 ARID5AQ03989 594 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 TRIML1Q8N9V2 468 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 FBXO18Q8NFZ0 1043 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 FAM81BQ96LP2 452 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 AKT3Q9Y243 479 aa12.43□□□□□ -0.42
AMBRA1-211ENST00000533727 TMEM191BP0C7N4 346 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 FCER1AP12319 257 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 CD19P15391 556 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 ALCAMQ13740 583 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 NSMCE1Q8WV22 266 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 FAM151AQ8WW52 585 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 TCP11Q8WWU5 503 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 CCDC77Q9BR77 488 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 SPP2Q13103 211 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 NEDD9Q14511 834 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 CCDC6Q16204 474 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 KRBA2Q6ZNG9 492 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 DCP1AQ9NPI6 582 aaPredicted RBP12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 TLR3O15455 904 aaKnown RBP12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 IGBP1P78318 339 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 ASIC2Q16515 512 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 CEP128Q6ZU80 1094 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 NAP1L3Q99457 506 aaPredicted RBP12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 RIOK1Q9BRS2 568 aaKnown RBP12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 MTIF3Q9H2K0 278 aaKnown RBP12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 ACAD9Q9H845 621 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 STK17AQ9UEE5 414 aa12.42□□□□□ -0.42
AMBRA1-211ENST00000533727 ORC2Q13416 577 aaPredicted RBP12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 SLC10A5Q5PT55 438 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 COL23A1Q86Y22 540 aaPredicted RBP12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 NSRP1Q9H0G5 558 aaKnown RBP12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 GTPBP6O43824 516 aaPredicted RBP12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 STK10O94804 968 aaKnown RBP12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 MYL1P05976 194 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 U2AF2P26368 475 aaKnown RBP eCLIP12.41□□□□□ -0.426e-7■■■■□ 24.6
AMBRA1-211ENST00000533727 UBXN2AP68543 259 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 TTLL4Q14679 1199 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 SURF1Q15526 300 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 TAF1CQ15572 869 aaPredicted RBP12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 KMT5BQ4FZB7 885 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 CCDC155Q8N6L0 562 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 ZBTB5O15062 677 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 CETPP11597 493 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 GYS1P13807 737 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 SLC16A2P36021 539 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 GMPSP49915 693 aaPredicted RBP12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 NLRP12P59046 1061 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 SEPT2Q15019 361 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 METTL23Q86XA0 190 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 CCDC50Q8IVM0 306 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 MB21D1Q8N884 522 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 STIM2Q9P246 746 aa12.41□□□□□ -0.42
AMBRA1-211ENST00000533727 TNPO2O14787 897 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms