RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 LHX8Q68G74 356 aa20.25■□□□□ 0.83
NXF1-217ENST00000533671 RUFY3Q7L099 469 aa20.25■□□□□ 0.83
NXF1-217ENST00000533671 SRBD1Q8N5C6 995 aaKnown RBP20.25■□□□□ 0.83
NXF1-217ENST00000533671 RGS22Q8NE09 1264 aa20.25■□□□□ 0.83
NXF1-217ENST00000533671 FGD4Q96M96 766 aa20.25■□□□□ 0.83
NXF1-217ENST00000533671 BRPF3Q9ULD4 1205 aa20.25■□□□□ 0.83
NXF1-217ENST00000533671 FAM184BQ9ULE4 1060 aa20.25■□□□□ 0.83
NXF1-217ENST00000533671 RARBP10826 455 aa20.24■□□□□ 0.83
NXF1-217ENST00000533671 ALDH5A1P51649 535 aaPredicted RBP20.24■□□□□ 0.83
NXF1-217ENST00000533671 SLC35G1Q2M3R5 365 aa20.24■□□□□ 0.83
NXF1-217ENST00000533671 NECAB2Q7Z6G3 386 aa20.24■□□□□ 0.83
NXF1-217ENST00000533671 CMTR1Q8N1G2 835 aaKnown RBP20.24■□□□□ 0.83
NXF1-217ENST00000533671 PURBQ96QR8 312 aaKnown RBP20.24■□□□□ 0.83
NXF1-217ENST00000533671 MAF1Q9H063 256 aa20.24■□□□□ 0.83
NXF1-217ENST00000533671 PPP1R11O60927 126 aaPredicted RBP20.23■□□□□ 0.83
NXF1-217ENST00000533671 ZNF865P0CJ78 1059 aaPredicted RBP20.23■□□□□ 0.83
NXF1-217ENST00000533671 METAP2P50579 478 aaKnown RBP eCLIP20.23■□□□□ 0.83
NXF1-217ENST00000533671 TMTC3Q6ZXV5 915 aa20.23■□□□□ 0.83
NXF1-217ENST00000533671 ARRDC4Q8NCT1 418 aa20.23■□□□□ 0.83
NXF1-217ENST00000533671 DNERQ8NFT8 737 aa20.23■□□□□ 0.83
NXF1-217ENST00000533671 TBC1D5Q92609 795 aa20.23■□□□□ 0.83
NXF1-217ENST00000533671 PAWRQ96IZ0 340 aaKnown RBP20.23■□□□□ 0.83
NXF1-217ENST00000533671 HTATIP2Q9BUP3 242 aa20.23■□□□□ 0.83
NXF1-217ENST00000533671 TM6SF1Q9BZW5 370 aa20.23■□□□□ 0.83
NXF1-217ENST00000533671 ZSWIM6Q9HCJ5 1215 aa20.23■□□□□ 0.83
NXF1-217ENST00000533671 LOC102724159A0A0B4J2E5 919 aa20.22■□□□□ 0.83
NXF1-217ENST00000533671 CCDC196A0A1B0GTZ2 297 aa20.22■□□□□ 0.83
NXF1-217ENST00000533671 PDE4DQ08499 809 aa20.22■□□□□ 0.83
NXF1-217ENST00000533671 PWP2Q15269 919 aaKnown RBP20.22■□□□□ 0.83
NXF1-217ENST00000533671 NOL8Q76FK4 1167 aaKnown RBP20.22■□□□□ 0.83
NXF1-217ENST00000533671 EEPD1Q7L9B9 569 aa20.22■□□□□ 0.83
NXF1-217ENST00000533671 UPF3BQ9BZI7 483 aaKnown RBP20.22■□□□□ 0.83
NXF1-217ENST00000533671 KBTBD13C9JR72 458 aa20.21■□□□□ 0.83
NXF1-217ENST00000533671 RCAN1P53805 252 aa20.21■□□□□ 0.83
NXF1-217ENST00000533671 PPP2R5BQ15173 497 aa20.21■□□□□ 0.83
NXF1-217ENST00000533671 SAMD3Q8N6K7 520 aa20.21■□□□□ 0.83
NXF1-217ENST00000533671 DIS3LQ8TF46 1054 aaKnown RBP20.21■□□□□ 0.83
NXF1-217ENST00000533671 DPF3Q92784 378 aa20.21■□□□□ 0.83
NXF1-217ENST00000533671 C11orf49Q9H6J7 331 aa20.21■□□□□ 0.83
NXF1-217ENST00000533671 XPNPEP3Q9NQH7 507 aa20.21■□□□□ 0.83
NXF1-217ENST00000533671 PDRG1Q9NUG6 133 aa20.21■□□□□ 0.83
NXF1-217ENST00000533671 ANAPC15P60006 121 aa20.2■□□□□ 0.82
NXF1-217ENST00000533671 CCDC144BQ3MJ40 725 aa20.2■□□□□ 0.82
NXF1-217ENST00000533671 GJC2Q5T442 439 aaPredicted RBP20.2■□□□□ 0.82
NXF1-217ENST00000533671 ARHGEF16Q5VV41 709 aa20.2■□□□□ 0.82
NXF1-217ENST00000533671 FBXL16Q8N461 479 aa20.2■□□□□ 0.82
NXF1-217ENST00000533671 SYTL5Q8TDW5 730 aaPredicted RBP20.2■□□□□ 0.82
NXF1-217ENST00000533671 TAAR1Q96RJ0 339 aa20.2■□□□□ 0.82
NXF1-217ENST00000533671 SPC25Q9HBM1 224 aa20.2■□□□□ 0.82
NXF1-217ENST00000533671 MAP3K20Q9NYL2 800 aaKnown RBP20.2■□□□□ 0.82
NXF1-217ENST00000533671 ASTN1O14525 1302 aa20.2■□□□□ 0.82
NXF1-217ENST00000533671 hCG_1642624A0A1W2PR95 340 aa20.19■□□□□ 0.82
NXF1-217ENST00000533671 GCOM1H8Y6P7 765 aaPredicted RBP20.19■□□□□ 0.82
NXF1-217ENST00000533671 POLR2MP0CAP2 368 aa20.19■□□□□ 0.82
NXF1-217ENST00000533671 RNF180Q86T96 592 aa20.19■□□□□ 0.82
NXF1-217ENST00000533671 FBXO16Q8IX29 292 aaPredicted RBP20.19■□□□□ 0.82
NXF1-217ENST00000533671 NSUN6Q8TEA1 469 aaKnown RBP20.19■□□□□ 0.82
NXF1-217ENST00000533671 CUL5Q93034 780 aa20.19■□□□□ 0.82
NXF1-217ENST00000533671 RMDN3Q96TC7 470 aa20.19■□□□□ 0.82
NXF1-217ENST00000533671 VTA1Q9NP79 307 aa20.19■□□□□ 0.82
NXF1-217ENST00000533671 DDX49Q9Y6V7 483 aaKnown RBP20.19■□□□□ 0.82
NXF1-217ENST00000533671 LRRC37A2A6NM11 1700 aa20.19■□□□□ 0.82
NXF1-217ENST00000533671 BRCA2P51587 3418 aa20.18■□□□□ 0.82
NXF1-217ENST00000533671 PDE4DIPQ5VU43 2346 aa20.18■□□□□ 0.82
NXF1-217ENST00000533671 DNM1LO00429 736 aa20.18■□□□□ 0.82
NXF1-217ENST00000533671 SEC24BO95487 1268 aa20.18■□□□□ 0.82
NXF1-217ENST00000533671 HOXA13P31271 388 aaPredicted RBP20.18■□□□□ 0.82
NXF1-217ENST00000533671 HSD17B4P51659 736 aa20.18■□□□□ 0.82
NXF1-217ENST00000533671 TNFAIP2Q03169 654 aa20.18■□□□□ 0.82
NXF1-217ENST00000533671 HEATR3Q7Z4Q2 680 aa20.18■□□□□ 0.82
NXF1-217ENST00000533671 UBE2Q1Q7Z7E8 422 aa20.18■□□□□ 0.82
NXF1-217ENST00000533671 MORC4Q8TE76 937 aa20.18■□□□□ 0.82
NXF1-217ENST00000533671 LENG1Q96BZ8 264 aaPredicted RBP20.18■□□□□ 0.82
NXF1-217ENST00000533671 AGXT2Q9BYV1 514 aa20.18■□□□□ 0.82
NXF1-217ENST00000533671 DUSP11O75319 330 aaKnown RBP20.17■□□□□ 0.82
NXF1-217ENST00000533671 PGK1P00558 417 aa20.17■□□□□ 0.82
NXF1-217ENST00000533671 EIF2AK2P19525 551 aaKnown RBP20.17■□□□□ 0.82
NXF1-217ENST00000533671 CDC27P30260 824 aa20.17■□□□□ 0.82
NXF1-217ENST00000533671 ADD1P35611 737 aaKnown RBP20.17■□□□□ 0.82
NXF1-217ENST00000533671 ADCYAP1R1P41586 468 aa20.17■□□□□ 0.82
NXF1-217ENST00000533671 IQSEC1Q6DN90 963 aa20.17■□□□□ 0.82
NXF1-217ENST00000533671 FCHSD1Q86WN1 690 aa20.17■□□□□ 0.82
NXF1-217ENST00000533671 SMARCC2Q8TAQ2 1214 aa20.17■□□□□ 0.82
NXF1-217ENST00000533671 SENP6Q9GZR1 1112 aaPredicted RBP20.17■□□□□ 0.82
NXF1-217ENST00000533671 COL20A1Q9P218 1284 aa20.17■□□□□ 0.82
NXF1-217ENST00000533671 CNTNAP5Q8WYK1 1306 aa20.17■□□□□ 0.82
NXF1-217ENST00000533671 OPLAHO14841 1288 aa20.16■□□□□ 0.82
NXF1-217ENST00000533671 MNX1P50219 401 aaPredicted RBP20.16■□□□□ 0.82
NXF1-217ENST00000533671 CCT2P78371 535 aaKnown RBP20.16■□□□□ 0.82
NXF1-217ENST00000533671 AKAP17AQ02040 695 aaKnown RBP20.16■□□□□ 0.82
NXF1-217ENST00000533671 TOB2Q14106 344 aaPredicted RBP20.16■□□□□ 0.82
NXF1-217ENST00000533671 LRRC41Q15345 812 aa20.16■□□□□ 0.82
NXF1-217ENST00000533671 IWS1Q96ST2 819 aa20.16■□□□□ 0.82
NXF1-217ENST00000533671 KATNBL1Q9H079 304 aa20.16■□□□□ 0.82
NXF1-217ENST00000533671 PDGFCQ9NRA1 345 aa20.16■□□□□ 0.82
NXF1-217ENST00000533671 V9GY48 417 aaPredicted RBP20.16■□□□□ 0.82
NXF1-217ENST00000533671 KIAA1217Q5T5P2 1943 aa20.15■□□□□ 0.82
NXF1-217ENST00000533671 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.15■□□□□ 0.82
NXF1-217ENST00000533671 C6orf222P0C671 652 aaPredicted RBP20.15■□□□□ 0.82
NXF1-217ENST00000533671 STXBP2Q15833 593 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms