RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 RPAP1Q9BWH6 1393 aaPredicted RBP7.66□□□□□ -1.18
CTNND1-236ENST00000533667 SLFN14P0C7P3 912 aa7.66□□□□□ -1.18
CTNND1-236ENST00000533667 MFAP3P55082 362 aa7.66□□□□□ -1.18
CTNND1-236ENST00000533667 ZNF658Q5TYW1 1059 aaPredicted RBP7.66□□□□□ -1.18
CTNND1-236ENST00000533667 TMED8Q6PL24 325 aaPredicted RBP7.66□□□□□ -1.18
CTNND1-236ENST00000533667 TRIM42Q8IWZ5 723 aa7.66□□□□□ -1.18
CTNND1-236ENST00000533667 NIM1KQ8IY84 436 aa7.66□□□□□ -1.18
CTNND1-236ENST00000533667 ARHGAP31Q2M1Z3 1444 aa7.66□□□□□ -1.18
CTNND1-236ENST00000533667 MAGI2Q86UL8 1455 aa7.66□□□□□ -1.18
CTNND1-236ENST00000533667 LMTK3Q96Q04 1460 aa7.66□□□□□ -1.18
CTNND1-236ENST00000533667 ARHGAP4P98171 946 aa7.66□□□□□ -1.18
CTNND1-236ENST00000533667 ZYXQ15942 572 aaKnown RBP7.66□□□□□ -1.18
CTNND1-236ENST00000533667 MAN2A1Q16706 1144 aa7.66□□□□□ -1.18
CTNND1-236ENST00000533667 LARP4BQ92615 738 aaKnown RBP7.66□□□□□ -1.18
CTNND1-236ENST00000533667 P2RX5Q93086 422 aa7.66□□□□□ -1.18
CTNND1-236ENST00000533667 SLC5A4Q9NY91 659 aa7.66□□□□□ -1.18
CTNND1-236ENST00000533667 IGSF1Q8N6C5 1336 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 KDM5CP41229 1560 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 CCDC151A5D8V7 595 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 PFDN6O15212 129 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 SUN1O94901 812 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 CASP14P31944 242 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 GARSP41250 739 aaKnown RBP7.65□□□□□ -1.18
CTNND1-236ENST00000533667 NSFP46459 744 aaKnown RBP7.65□□□□□ -1.18
CTNND1-236ENST00000533667 PSMD2Q13200 908 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 DMP1Q13316 513 aaPredicted RBP7.65□□□□□ -1.18
CTNND1-236ENST00000533667 FAM102BQ5T8I3 360 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 DCAF15Q66K64 600 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 ARMCX5Q6P1M9 558 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 MAP7D3Q8IWC1 876 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 LINC00301Q8NCQ3 95 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 CLIC6Q96NY7 704 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 RWDD2AQ9UIY3 292 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 LEMD3Q9Y2U8 911 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 PBRM1Q86U86 1689 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 KIF23Q02241 960 aaPredicted RBP7.65□□□□□ -1.18
CTNND1-236ENST00000533667 PKP1Q13835 747 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 ZNF827Q17R98 1081 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 MUM1Q2TAK8 710 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 ARHGEF16Q5VV41 709 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 TRIM50Q86XT4 487 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 DBNLQ9UJU6 430 aaKnown RBP7.65□□□□□ -1.18
CTNND1-236ENST00000533667 ERVK-7P63135 1459 aa7.65□□□□□ -1.18
CTNND1-236ENST00000533667 KAT6BQ8WYB5 2073 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 BUB1O43683 1085 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 RNF8O76064 485 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 IFNB1P01574 187 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 IL9RQ01113 521 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 PTK2Q05397 1052 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 CHRNDQ07001 517 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 CERKLQ49MI3 558 aaPredicted RBP7.65□□□□□ -1.19
CTNND1-236ENST00000533667 XKR9Q5GH70 373 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 RINT1Q6NUQ1 792 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 GAS2L3Q86XJ1 694 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 PLA2G4DQ86XP0 818 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 RASEFQ8IZ41 740 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 CCHCR1Q8TD31 782 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 CDKL2Q92772 493 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 ZBTB9Q96C00 473 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 PBKQ96KB5 322 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 GBP5Q96PP8 586 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 ADPGKQ9BRR6 497 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.65□□□□□ -1.19
CTNND1-236ENST00000533667 AMNQ9BXJ7 453 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 THAP9Q9H5L6 903 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 SLC39A2Q9NP94 309 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 HESX1Q9UBX0 185 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 CD2APQ9Y5K6 639 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 GJA3Q9Y6H8 435 aa7.65□□□□□ -1.19
CTNND1-236ENST00000533667 CYP21A2P08686 494 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 IFNAR1P17181 557 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 GTF2IP78347 998 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 FKBP3Q00688 224 aaKnown RBP7.64□□□□□ -1.19
CTNND1-236ENST00000533667 BFSP1Q12934 665 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 LRRC24Q50LG9 513 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 RDH13Q8NBN7 331 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.64□□□□□ -1.19
CTNND1-236ENST00000533667 GLG1Q92896 1179 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 PANX2Q96RD6 677 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 CNOT10Q9H9A5 744 aaKnown RBP7.64□□□□□ -1.19
CTNND1-236ENST00000533667 PYCARDQ9ULZ3 195 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 LOC102724159A0A0B4J2E5 919 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 IL6STP40189 918 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-236ENST00000533667 BTDP43251 543 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 BCAMP50895 628 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 PSMD7P51665 324 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 YARSP54577 528 aaKnown RBP7.64□□□□□ -1.19
CTNND1-236ENST00000533667 MYL7Q01449 175 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 ICA1Q05084 483 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 TCP10Q12799 353 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 PWP2Q15269 919 aaKnown RBP7.64□□□□□ -1.19
CTNND1-236ENST00000533667 SLC35F6Q8N357 371 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 MGARPQ8TDB4 240 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 LRRC8CQ8TDW0 803 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 SDR42E1Q8WUS8 393 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 HVCN1Q96D96 273 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 JPH2Q9BR39 696 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-236ENST00000533667 NRBP2Q9NSY0 501 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 AFG3L2Q9Y4W6 797 aa7.64□□□□□ -1.19
CTNND1-236ENST00000533667 ZFYVE16Q7Z3T8 1539 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms