RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 ZIC5Q96T25 663 aa16.13■□□□□ 0.17
HIF3A-215ENST00000533145 MOV10L1Q9BXT6 1211 aaKnown RBP16.13■□□□□ 0.17
HIF3A-215ENST00000533145 RNF146Q9NTX7 359 aa16.13■□□□□ 0.17
HIF3A-215ENST00000533145 BIN2Q9UBW5 565 aaPredicted RBP16.13■□□□□ 0.17
HIF3A-215ENST00000533145 MYH7BA7E2Y1 1941 aa16.13■□□□□ 0.17
HIF3A-215ENST00000533145 NFIBO00712 420 aa16.12■□□□□ 0.17
HIF3A-215ENST00000533145 TAL1P17542 331 aaPredicted RBP16.12■□□□□ 0.17
HIF3A-215ENST00000533145 TRAPPC10P48553 1259 aa16.12■□□□□ 0.17
HIF3A-215ENST00000533145 FAM110CQ1W6H9 321 aa16.12■□□□□ 0.17
HIF3A-215ENST00000533145 RILPL1Q5EBL4 403 aa16.12■□□□□ 0.17
HIF3A-215ENST00000533145 EARS2Q5JPH6 523 aaKnown RBP16.12■□□□□ 0.17
HIF3A-215ENST00000533145 USP17L6PQ6QN14 398 aa16.12■□□□□ 0.17
HIF3A-215ENST00000533145 GPRC5AQ8NFJ5 357 aa16.12■□□□□ 0.17
HIF3A-215ENST00000533145 TBC1D5Q92609 795 aa16.12■□□□□ 0.17
HIF3A-215ENST00000533145 PAGR1Q9BTK6 254 aa16.12■□□□□ 0.17
HIF3A-215ENST00000533145 ACAD9Q9H845 621 aa16.12■□□□□ 0.17
HIF3A-215ENST00000533145 PCNTO95613 3336 aa16.12■□□□□ 0.17
HIF3A-215ENST00000533145 CCDC194A0A1B0GVG4 234 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 TLR2O60603 784 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 CFBP00751 764 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 BCRP11274 1271 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 CCNA1P78396 465 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 PLS1Q14651 629 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 NONOQ15233 471 aaKnown RBP eCLIP16.11■□□□□ 0.17
HIF3A-215ENST00000533145 TAF1CQ15572 869 aaPredicted RBP16.11■□□□□ 0.17
HIF3A-215ENST00000533145 UBE2SQ16763 222 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 JAKMIP3Q5VZ66 844 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 C17orf99Q6UX52 265 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 PIK3AP1Q6ZUJ8 805 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 RASGRP4Q8TDF6 673 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 ZNF396Q96N95 335 aaPredicted RBP16.11■□□□□ 0.17
HIF3A-215ENST00000533145 MROH8Q9H579 483 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 ZFYVE28Q9HCC9 887 aa16.11■□□□□ 0.17
HIF3A-215ENST00000533145 THSD7BQ9C0I4 1608 aa16.1■□□□□ 0.17
HIF3A-215ENST00000533145 CA12O43570 354 aa16.1■□□□□ 0.17
HIF3A-215ENST00000533145 AOC2O75106 756 aa16.1■□□□□ 0.17
HIF3A-215ENST00000533145 BAG4O95429 457 aaKnown RBP16.1■□□□□ 0.17
HIF3A-215ENST00000533145 TOB1P50616 345 aaPredicted RBP16.1■□□□□ 0.17
HIF3A-215ENST00000533145 NOM1Q5C9Z4 860 aaKnown RBP16.1■□□□□ 0.17
HIF3A-215ENST00000533145 FAM173BQ6P4H8 233 aa16.1■□□□□ 0.17
HIF3A-215ENST00000533145 ANKRD13CQ8N6S4 541 aa16.1■□□□□ 0.17
HIF3A-215ENST00000533145 CFHR5Q9BXR6 569 aa16.1■□□□□ 0.17
HIF3A-215ENST00000533145 TMEM260Q9NX78 707 aa16.1■□□□□ 0.17
HIF3A-215ENST00000533145 CFAP45Q9UL16 551 aa16.1■□□□□ 0.17
HIF3A-215ENST00000533145 NOL7Q9UMY1 257 aaKnown RBP16.1■□□□□ 0.17
HIF3A-215ENST00000533145 PEX10O60683 326 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 ERCC3P19447 782 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 VEGFBP49765 207 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 USP11P51784 963 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 RPS6P62753 249 aaKnown RBP16.09■□□□□ 0.17
HIF3A-215ENST00000533145 KRT85P78386 507 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 DNM1Q05193 864 aaKnown RBP16.09■□□□□ 0.17
HIF3A-215ENST00000533145 RNF207Q6ZRF8 634 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 SYTL5Q8TDW5 730 aaPredicted RBP16.09■□□□□ 0.17
HIF3A-215ENST00000533145 CRYGNQ8WXF5 182 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 ANO3Q9BYT9 981 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 HOMER2Q9NSB8 354 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 POLR3EQ9NVU0 708 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 CYP39A1Q9NYL5 469 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 RTEL1Q9NZ71 1219 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 MORC2Q9Y6X9 1032 aaPredicted RBP16.09■□□□□ 0.17
HIF3A-215ENST00000533145 LCTP09848 1927 aa16.09■□□□□ 0.17
HIF3A-215ENST00000533145 FAM205CA6NFA0 338 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 SPDYE3A6NKU9 549 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 EDIL3O43854 480 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 CYP3A4P08684 503 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 HSPA1AP0DMV8 641 aaKnown RBP16.08■□□□□ 0.16
HIF3A-215ENST00000533145 HSPA1BP0DMV9 641 aaKnown RBP16.08■□□□□ 0.16
HIF3A-215ENST00000533145 HOXA13P31271 388 aaPredicted RBP16.08■□□□□ 0.16
HIF3A-215ENST00000533145 SREBF1P36956 1147 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 GRM1Q13255 1194 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 ORC2Q13416 577 aaPredicted RBP16.08■□□□□ 0.16
HIF3A-215ENST00000533145 BAATQ14032 418 aaPredicted RBP16.08■□□□□ 0.16
HIF3A-215ENST00000533145 NCAPG2Q86XI2 1143 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 TBCKQ8TEA7 893 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 GBP4Q96PP9 640 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 USP28Q96RU2 1077 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 EHMT1Q9H9B1 1298 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 A1CFQ9NQ94 594 aaKnown RBP16.08■□□□□ 0.16
HIF3A-215ENST00000533145 RCOR1Q9UKL0 485 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 PFASO15067 1338 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 FRMPD4Q14CM0 1322 aa16.08■□□□□ 0.16
HIF3A-215ENST00000533145 STRNO43815 780 aa16.07■□□□□ 0.16
HIF3A-215ENST00000533145 NASPP49321 788 aaPredicted RBP16.07■□□□□ 0.16
HIF3A-215ENST00000533145 INF2Q27J81 1249 aa16.07■□□□□ 0.16
HIF3A-215ENST00000533145 ANO1Q5XXA6 986 aa16.07■□□□□ 0.16
HIF3A-215ENST00000533145 PPP4R3AQ6IN85 833 aa16.07■□□□□ 0.16
HIF3A-215ENST00000533145 MOXD1Q6UVY6 613 aa16.07■□□□□ 0.16
HIF3A-215ENST00000533145 NSMFQ6X4W1 530 aa16.07■□□□□ 0.16
HIF3A-215ENST00000533145 NEK8Q86SG6 692 aa16.07■□□□□ 0.16
HIF3A-215ENST00000533145 ABRAQ8N0Z2 381 aa16.07■□□□□ 0.16
HIF3A-215ENST00000533145 NAP1L4Q99733 375 aaKnown RBP16.07■□□□□ 0.16
HIF3A-215ENST00000533145 SCAND2PQ9GZW5 306 aaPredicted RBP16.07■□□□□ 0.16
HIF3A-215ENST00000533145 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.07■□□□□ 0.16
HIF3A-215ENST00000533145 COL20A1Q9P218 1284 aa16.07■□□□□ 0.16
HIF3A-215ENST00000533145 TFIP11Q9UBB9 837 aaKnown RBP16.07■□□□□ 0.16
HIF3A-215ENST00000533145 RPTORQ8N122 1335 aa16.07■□□□□ 0.16
HIF3A-215ENST00000533145 PLXNB2O15031 1838 aa16.07■□□□□ 0.16
HIF3A-215ENST00000533145 CYP3A7-CYP3A51PA0A087WV96 503 aa16.06■□□□□ 0.16
HIF3A-215ENST00000533145 YEATS4O95619 227 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms