RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 COQ3Q9NZJ6 369 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 ITGB1BP2Q9UKP3 347 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 RTEL1-TNFRSF6BF6WH68 1400 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 SOCS7O14512 581 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 CTAGE5O15320 804 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 SRGAP3O43295 1099 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 RNF40O75150 1001 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 CHGBP05060 677 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 GALNSP34059 522 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 SEPHS1P49903 392 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 MAP7D1Q3KQU3 841 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 MILR1Q7Z6M3 343 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 CCDC83Q8IWF9 413 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 SIRT2Q8IXJ6 389 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 RPAP2Q8IXW5 612 aaPredicted RBP7.64□□□□□ -1.19
BDNF-217ENST00000533131 NFATC2IPQ8NCF5 419 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 NAXEQ8NCW5 288 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 BICD2Q8TD16 824 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 CNDP2Q96KP4 475 aaKnown RBP7.64□□□□□ -1.19
BDNF-217ENST00000533131 EXOC1Q9NV70 894 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 ZSWIM5Q9P217 1185 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 NFKBIL1Q9UBC1 381 aaPredicted RBP7.64□□□□□ -1.19
BDNF-217ENST00000533131 ANKRD36BQ8N2N9 1353 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 DUOX2Q9NRD8 1548 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 MBD3O95983 291 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 GNAT2P19087 354 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 PABPC4Q13310 644 aaKnown RBP eCLIP7.64□□□□□ -1.19
BDNF-217ENST00000533131 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.64□□□□□ -1.19
BDNF-217ENST00000533131 HDAC2Q92769 488 aaKnown RBP7.64□□□□□ -1.19
BDNF-217ENST00000533131 HPS3Q969F9 1004 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 YME1L1Q96TA2 773 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 GPATCH1Q9BRR8 931 aaKnown RBP7.64□□□□□ -1.19
BDNF-217ENST00000533131 USP26Q9BXU7 913 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 SUCOQ9UBS9 1254 aaKnown RBP7.64□□□□□ -1.19
BDNF-217ENST00000533131 CRYL1Q9Y2S2 319 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 ERVK-7P63135 1459 aa7.64□□□□□ -1.19
BDNF-217ENST00000533131 FERP16591 822 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 MX1P20591 662 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 CBX1P83916 185 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 TEFQ10587 303 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 COX10Q12887 443 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 PRKG2Q13237 762 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 KIF22Q14807 665 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 TIGD6Q17RP2 521 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 GBP6Q6ZN66 633 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 ZNF296Q8WUU4 475 aaPredicted RBP7.63□□□□□ -1.19
BDNF-217ENST00000533131 UROC1Q96N76 676 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 RUNDC3BQ96NL0 473 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 PPP1R12BO60237 982 aaPredicted RBP7.63□□□□□ -1.19
BDNF-217ENST00000533131 PDHA1P08559 390 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 PMLP29590 882 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 HOXD12P35452 270 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 AK2P54819 239 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 CENPCQ03188 943 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 STAT4Q14765 748 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 TNNI3KQ59H18 835 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 C10orf76Q5T2E6 689 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 C6orf15Q6UXA7 325 aaPredicted RBP7.63□□□□□ -1.19
BDNF-217ENST00000533131 USP7Q93009 1102 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 BHMTQ93088 406 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 YY1AP1Q9H869 796 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 DDX21Q9NR30 783 aaKnown RBP eCLIP7.63□□□□□ -1.19
BDNF-217ENST00000533131 KRT84Q9NSB2 600 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 ATP8A2Q9NTI2 1148 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 CALCOCO1Q9P1Z2 691 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 ABCC11Q96J66 1382 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 MAGEB6P1A0A0J9YX57 407 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 STARD3NLO95772 234 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 EIF4A3P38919 411 aaKnown RBP7.63□□□□□ -1.19
BDNF-217ENST00000533131 PDE1AP54750 535 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 TBX2Q13207 712 aaPredicted RBP7.63□□□□□ -1.19
BDNF-217ENST00000533131 SYCP1Q15431 976 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 MUM1Q2TAK8 710 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 GALNT5Q7Z7M9 940 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 DCLK2Q8N568 766 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 TEKT1Q969V4 418 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 ZNF700Q9H0M5 742 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 AGLP35573 1532 aa7.63□□□□□ -1.19
BDNF-217ENST00000533131 NPC1L1Q9UHC9 1359 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 MROH2AA6NES4 1674 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 ZBTB39O15060 712 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 COBLO75128 1261 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 RBM5P52756 815 aaKnown RBP eCLIP7.62□□□□□ -1.19
BDNF-217ENST00000533131 NRLP54845 237 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 ROR1Q01973 937 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 PRKG1Q13976 671 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 CCDC38Q502W7 563 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 RBM20Q5T481 1227 aaKnown RBP7.62□□□□□ -1.19
BDNF-217ENST00000533131 CEP85Q6P2H3 762 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 NXPE4Q6UWF7 544 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 LRRTM3Q86VH5 581 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 EPS8L3Q8TE67 593 aaKnown RBP7.62□□□□□ -1.19
BDNF-217ENST00000533131 MRPL9Q9BYD2 267 aaKnown RBP7.62□□□□□ -1.19
BDNF-217ENST00000533131 UNKQ9C0B0 810 aaKnown RBP7.62□□□□□ -1.19
BDNF-217ENST00000533131 EPB41L4AQ9HCS5 686 aaPredicted RBP7.62□□□□□ -1.19
BDNF-217ENST00000533131 ANLNQ9NQW6 1124 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 NSFL1CQ9UNZ2 370 aaKnown RBP7.62□□□□□ -1.19
BDNF-217ENST00000533131 N6AMT1Q9Y5N5 214 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 ATP7AQ04656 1500 aa7.62□□□□□ -1.19
BDNF-217ENST00000533131 H0YHG0 523 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms