RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PDGFCQ9NRA1 345 aa35.26■■■■□ 3.24
SSSCA1-207ENST00000533115 MYH6P13533 1939 aa35.26■■■■□ 3.23
SSSCA1-207ENST00000533115 PRC1O43663 620 aa35.25■■■■□ 3.23
SSSCA1-207ENST00000533115 MCM5P33992 734 aa35.25■■■■□ 3.23
SSSCA1-207ENST00000533115 MAGEA10P43363 369 aaPredicted RBP35.25■■■■□ 3.23
SSSCA1-207ENST00000533115 TRIM60Q495X7 471 aa35.25■■■■□ 3.23
SSSCA1-207ENST00000533115 IQSEC1Q6DN90 963 aa35.25■■■■□ 3.23
SSSCA1-207ENST00000533115 NOL8Q76FK4 1167 aaKnown RBP35.25■■■■□ 3.23
SSSCA1-207ENST00000533115 LY9Q9HBG7 655 aa35.25■■■■□ 3.23
SSSCA1-207ENST00000533115 MRPL11Q9Y3B7 192 aaKnown RBP35.25■■■■□ 3.23
SSSCA1-207ENST00000533115 BMP8BP34820 402 aa35.24■■■■□ 3.23
SSSCA1-207ENST00000533115 IRX5P78411 483 aaPredicted RBP35.24■■■■□ 3.23
SSSCA1-207ENST00000533115 MCF2L2Q86YR7 1114 aa35.24■■■■□ 3.23
SSSCA1-207ENST00000533115 PCSK9Q8NBP7 692 aaKnown RBP35.24■■■■□ 3.23
SSSCA1-207ENST00000533115 MPHOSPH6Q99547 160 aaKnown RBP35.24■■■■□ 3.23
SSSCA1-207ENST00000533115 AMNQ9BXJ7 453 aa35.24■■■■□ 3.23
SSSCA1-207ENST00000533115 GNEQ9Y223 722 aaKnown RBP35.24■■■■□ 3.23
SSSCA1-207ENST00000533115 ZBTB5O15062 677 aa35.23■■■■□ 3.23
SSSCA1-207ENST00000533115 SMPD1P17405 629 aa35.23■■■■□ 3.23
SSSCA1-207ENST00000533115 NKX3-2P78367 333 aa35.23■■■■□ 3.23
SSSCA1-207ENST00000533115 RNF20Q5VTR2 975 aa35.23■■■■□ 3.23
SSSCA1-207ENST00000533115 NUP133Q8WUM0 1156 aa35.23■■■■□ 3.23
SSSCA1-207ENST00000533115 TBC1D5Q92609 795 aa35.23■■■■□ 3.23
SSSCA1-207ENST00000533115 RIOX1Q9H6W3 641 aa35.23■■■■□ 3.23
SSSCA1-207ENST00000533115 GPHNQ9NQX3 736 aaPredicted RBP35.23■■■■□ 3.23
SSSCA1-207ENST00000533115 A0A1W2PPC1 479 aa35.22■■■■□ 3.23
SSSCA1-207ENST00000533115 FXR1P51114 621 aaKnown RBP eCLIP35.22■■■■□ 3.23
SSSCA1-207ENST00000533115 GNASQ5JWF2 1037 aa35.22■■■■□ 3.23
SSSCA1-207ENST00000533115 TMEM87BQ96K49 555 aa35.22■■■■□ 3.23
SSSCA1-207ENST00000533115 PRKAG2Q9UGJ0 569 aa35.22■■■■□ 3.23
SSSCA1-207ENST00000533115 CTAGE5O15320 804 aa35.21■■■■□ 3.23
SSSCA1-207ENST00000533115 EDNRBP24530 442 aa35.21■■■■□ 3.23
SSSCA1-207ENST00000533115 COL9A3Q14050 684 aaPredicted RBP35.21■■■■□ 3.23
SSSCA1-207ENST00000533115 SLC35G1Q2M3R5 365 aa35.21■■■■□ 3.23
SSSCA1-207ENST00000533115 TLK2Q86UE8 772 aa35.21■■■■□ 3.23
SSSCA1-207ENST00000533115 STARD7Q9NQZ5 370 aa35.21■■■■□ 3.23
SSSCA1-207ENST00000533115 PCDH10Q9P2E7 1040 aa35.21■■■■□ 3.23
SSSCA1-207ENST00000533115 SH2B2O14492 632 aaPredicted RBP35.2■■■■□ 3.23
SSSCA1-207ENST00000533115 ASGR1P07306 291 aa35.2■■■■□ 3.23
SSSCA1-207ENST00000533115 PDE4DQ08499 809 aa35.2■■■■□ 3.23
SSSCA1-207ENST00000533115 ZNF654Q8IZM8 581 aa35.2■■■■□ 3.23
SSSCA1-207ENST00000533115 TMTC2Q8N394 836 aa35.2■■■■□ 3.23
SSSCA1-207ENST00000533115 SYTL5Q8TDW5 730 aaPredicted RBP35.2■■■■□ 3.23
SSSCA1-207ENST00000533115 MAP3K14Q99558 947 aa35.2■■■■□ 3.23
SSSCA1-207ENST00000533115 B4DLN1 442 aa35.19■■■■□ 3.22
SSSCA1-207ENST00000533115 PPP1R11O60927 126 aaPredicted RBP35.19■■■■□ 3.22
SSSCA1-207ENST00000533115 DDAH1O94760 285 aa35.19■■■■□ 3.22
SSSCA1-207ENST00000533115 MRPL12P52815 198 aaKnown RBP35.19■■■■□ 3.22
SSSCA1-207ENST00000533115 HOMER1Q86YM7 354 aa35.19■■■■□ 3.22
SSSCA1-207ENST00000533115 AP5M1Q9H0R1 490 aa35.19■■■■□ 3.22
SSSCA1-207ENST00000533115 Q9Y3F1 56 aa35.19■■■■□ 3.22
SSSCA1-207ENST00000533115 CYTH3O43739 400 aa35.18■■■■□ 3.22
SSSCA1-207ENST00000533115 TLE2Q04725 743 aa35.18■■■■□ 3.22
SSSCA1-207ENST00000533115 GLT1D1Q96MS3 346 aa35.18■■■■□ 3.22
SSSCA1-207ENST00000533115 PIGSQ96S52 555 aa35.18■■■■□ 3.22
SSSCA1-207ENST00000533115 PCDHA1Q9Y5I3 950 aa35.18■■■■□ 3.22
SSSCA1-207ENST00000533115 ELP1O95163 1332 aa35.17■■■■□ 3.22
SSSCA1-207ENST00000533115 RBM47A0AV96 593 aaKnown RBP35.17■■■■□ 3.22
SSSCA1-207ENST00000533115 DYNC1LI2O43237 492 aaPredicted RBP35.17■■■■□ 3.22
SSSCA1-207ENST00000533115 MDM2Q00987 491 aaPredicted RBP35.17■■■■□ 3.22
SSSCA1-207ENST00000533115 BEX3Q00994 111 aa35.17■■■■□ 3.22
SSSCA1-207ENST00000533115 TMEM63BQ5T3F8 832 aa35.17■■■■□ 3.22
SSSCA1-207ENST00000533115 NFXL1Q6ZNB6 911 aa35.17■■■■□ 3.22
SSSCA1-207ENST00000533115 TAAR1Q96RJ0 339 aa35.17■■■■□ 3.22
SSSCA1-207ENST00000533115 MYL10Q9BUA6 226 aa35.17■■■■□ 3.22
SSSCA1-207ENST00000533115 WDR11Q9BZH6 1224 aa35.17■■■■□ 3.22
SSSCA1-207ENST00000533115 COL20A1Q9P218 1284 aa35.17■■■■□ 3.22
SSSCA1-207ENST00000533115 CCDC69A6NI79 296 aa35.16■■■■□ 3.22
SSSCA1-207ENST00000533115 PTGS1P23219 599 aa35.16■■■■□ 3.22
SSSCA1-207ENST00000533115 LIFRP42702 1097 aa35.16■■■■□ 3.22
SSSCA1-207ENST00000533115 TRAF1Q13077 416 aa35.16■■■■□ 3.22
SSSCA1-207ENST00000533115 DUSP28Q4G0W2 176 aa35.16■■■■□ 3.22
SSSCA1-207ENST00000533115 CTCFLQ8NI51 663 aaPredicted RBP35.16■■■■□ 3.22
SSSCA1-207ENST00000533115 PRDM5Q9NQX1 630 aaPredicted RBP35.16■■■■□ 3.22
SSSCA1-207ENST00000533115 PDLIM7Q9NR12 457 aa35.16■■■■□ 3.22
SSSCA1-207ENST00000533115 OPLAHO14841 1288 aa35.15■■■■□ 3.22
SSSCA1-207ENST00000533115 CFBP00751 764 aa35.15■■■■□ 3.22
SSSCA1-207ENST00000533115 FSCN1Q16658 493 aaKnown RBP35.15■■■■□ 3.22
SSSCA1-207ENST00000533115 NSUN6Q8TEA1 469 aaKnown RBP35.15■■■■□ 3.22
SSSCA1-207ENST00000533115 LBHD1Q9BQE6 289 aaPredicted RBP35.15■■■■□ 3.22
SSSCA1-207ENST00000533115 UBE2OQ9C0C9 1292 aaKnown RBP35.15■■■■□ 3.22
SSSCA1-207ENST00000533115 BAZ2BQ9UIF8 2168 aaKnown RBP35.15■■■■□ 3.22
SSSCA1-207ENST00000533115 PNMA6FA0A0J9YX94 578 aa35.14■■■■□ 3.22
SSSCA1-207ENST00000533115 KIF5BP33176 963 aa35.14■■■■□ 3.22
SSSCA1-207ENST00000533115 VTI1AQ96AJ9 217 aa35.14■■■■□ 3.22
SSSCA1-207ENST00000533115 NEK1Q96PY6 1258 aa35.14■■■■□ 3.22
SSSCA1-207ENST00000533115 PQBP1O60828 265 aaKnown RBP35.13■■■■□ 3.21
SSSCA1-207ENST00000533115 HSD17B4P51659 736 aa35.13■■■■□ 3.21
SSSCA1-207ENST00000533115 GHRHRQ02643 423 aa35.13■■■■□ 3.21
SSSCA1-207ENST00000533115 TSGA10IPQ3SY00 556 aa35.13■■■■□ 3.21
SSSCA1-207ENST00000533115 ANKRD33Q7Z3H0 272 aa35.13■■■■□ 3.21
SSSCA1-207ENST00000533115 RMDN3Q96TC7 470 aa35.13■■■■□ 3.21
SSSCA1-207ENST00000533115 LRRC2Q9BYS8 371 aa35.13■■■■□ 3.21
SSSCA1-207ENST00000533115 ZEB2O60315 1214 aa35.12■■■■□ 3.21
SSSCA1-207ENST00000533115 SH3RF1Q7Z6J0 888 aa35.12■■■■□ 3.21
SSSCA1-207ENST00000533115 RASEFQ8IZ41 740 aa35.12■■■■□ 3.21
SSSCA1-207ENST00000533115 TOX2Q96NM4 488 aa35.12■■■■□ 3.21
SSSCA1-207ENST00000533115 IWS1Q96ST2 819 aa35.12■■■■□ 3.21
SSSCA1-207ENST00000533115 MAP3K20Q9NYL2 800 aaKnown RBP35.12■■■■□ 3.21
SSSCA1-207ENST00000533115 A0A0U1RQG5 324 aaPredicted RBP35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms