RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 SKAP1Q86WV1 359 aa11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 FAM126BQ8IXS8 530 aa11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 CHURC1Q8WUH1 139 aa11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 PRRC2BQ5JSZ5 2229 aaKnown RBP11.96□□□□□ -0.49
CHMP4A-206ENST00000533011 SMCHD1A6NHR9 2005 aa11.96□□□□□ -0.5
CHMP4A-206ENST00000533011 SYNRGQ9UMZ2 1314 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 TMEM232C9JQI7 657 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 ZBED4O75132 1171 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 KDM4AO75164 1064 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 CD4P01730 458 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 FDX1P10109 184 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 ATP2A2P16615 1042 aaKnown RBP11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 STAT2P52630 851 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 PTH1RQ03431 593 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 KCTD2Q14681 263 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 PUS10Q3MIT2 529 aaKnown RBP11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 CCDC178Q5BJE1 867 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 ERICH6BQ5W0A0 696 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 RCSD1Q6JBY9 416 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 IQCA1Q86XH1 822 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 RIOX2Q8IUF8 465 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 FAM178BQ8IXR5 827 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 REPS2Q8NFH8 660 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 PHOSPHO2Q8TCD6 241 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 KIFC2Q96AC6 838 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 MFSD14AQ96MC6 490 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 TMEM47Q9BQJ4 181 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 PPP1R12CQ9BZL4 782 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 KRT23Q9C075 422 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 CNNM2Q9H8M5 875 aa11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 ZNF214Q9UL59 606 aaPredicted RBP11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 ISY1Q9ULR0 285 aaKnown RBP11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 CTDP1Q9Y5B0 961 aaPredicted RBP11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 U3KPZ7 1027 aaPredicted RBP11.95□□□□□ -0.5
CHMP4A-206ENST00000533011 B4E1Z4 1266 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 KIF28PB7ZC32 967 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 ATP2A1O14983 1001 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 PLA2G6O60733 806 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 CABYRO75952 493 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 ASGR1P07306 291 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 CYP2C18P33260 490 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 RABGGTBP53611 331 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 ZNF792Q3KQV3 632 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 KIAA1211Q6ZU35 1233 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 KCTD1Q719H9 257 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 FAM160B2Q86V87 743 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 DGKHQ86XP1 1220 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 DCAF4Q8WV16 495 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 MAP4K1Q92918 833 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 MMP19Q99542 508 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 PRRX2Q99811 253 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 ZKSCAN3Q9BRR0 538 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 TEX13BQ9BXU2 312 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 HIPK3Q9H422 1215 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 SLC38A10Q9HBR0 1119 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 ZSWIM5Q9P217 1185 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 LRRC37A2A6NM11 1700 aa11.94□□□□□ -0.5
CHMP4A-206ENST00000533011 REV3LO60673 3130 aa11.93□□□□□ -0.5
CHMP4A-206ENST00000533011 CYP21A2P08686 494 aa11.93□□□□□ -0.5
CHMP4A-206ENST00000533011 OAZ1P54368 228 aa11.93□□□□□ -0.5
CHMP4A-206ENST00000533011 TRDNQ13061 729 aa11.93□□□□□ -0.5
CHMP4A-206ENST00000533011 IKQ13123 557 aaPredicted RBP11.93□□□□□ -0.5
CHMP4A-206ENST00000533011 SNRNP48Q6IEG0 339 aaKnown RBP11.93□□□□□ -0.5
CHMP4A-206ENST00000533011 CPXCR1Q8N123 301 aa11.93□□□□□ -0.5
CHMP4A-206ENST00000533011 CHMP4CQ96CF2 233 aa11.93□□□□□ -0.5
CHMP4A-206ENST00000533011 ZSCAN10Q96SZ4 725 aaPredicted RBP11.93□□□□□ -0.5
CHMP4A-206ENST00000533011 ESYT1Q9BSJ8 1104 aa11.93□□□□□ -0.5
CHMP4A-206ENST00000533011 CD320Q9NPF0 282 aa11.93□□□□□ -0.5
CHMP4A-206ENST00000533011 MTMR7Q9Y216 660 aa11.93□□□□□ -0.5
CHMP4A-206ENST00000533011 POTEB3A0JP26 581 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 ZBBXA8MT70 800 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 DCXO43602 365 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 C6orf222P0C671 652 aaPredicted RBP11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 ACTN1P12814 892 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 TAL1P17542 331 aaPredicted RBP11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 SSTR3P32745 418 aaPredicted RBP11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 GJA9P57773 515 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 CCDC96Q2M329 555 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 LEXMQ3ZCV2 418 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 GNASQ5JWF2 1037 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 POTEBQ6S5H4 581 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 CASC1Q6TDU7 716 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 MAMDC4Q6UXC1 1216 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 ANKS1AQ92625 1134 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 UPF3AQ9H1J1 476 aaKnown RBP11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 RAVER2Q9HCJ3 691 aaKnown RBP11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 PPP4R2Q9NY27 417 aa11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 RBM8AQ9Y5S9 174 aaKnown RBP11.92□□□□□ -0.5
CHMP4A-206ENST00000533011 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 RFXAPO00287 272 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 CA3P07451 260 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 SNHG28P0DPA3 235 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 PDHBP11177 359 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 MYOGP15173 224 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 SLC4A3P48751 1232 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 NKX3-2P78367 333 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 PKN1Q16512 942 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 BTNL9Q6UXG8 535 aa11.91□□□□□ -0.5
CHMP4A-206ENST00000533011 RASGRP2Q7LDG7 609 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms