RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 RBM8AQ9Y5S9 174 aaKnown RBP20.83■□□□□ 0.93
SMG1-203ENST00000532700 PARP1P09874 1014 aaKnown RBP20.82■□□□□ 0.92
SMG1-203ENST00000532700 GNASQ5JWF2 1037 aa20.82■□□□□ 0.92
SMG1-203ENST00000532700 Q7L0L9 218 aa20.82■□□□□ 0.92
SMG1-203ENST00000532700 RUFY2Q8WXA3 655 aa20.82■□□□□ 0.92
SMG1-203ENST00000532700 U3KPZ7 1027 aaPredicted RBP20.82■□□□□ 0.92
SMG1-203ENST00000532700 GRIN2DO15399 1336 aa20.81■□□□□ 0.92
SMG1-203ENST00000532700 KIAA1217Q5T5P2 1943 aa20.81■□□□□ 0.92
SMG1-203ENST00000532700 MOXD2PA6NHM9 499 aa20.81■□□□□ 0.92
SMG1-203ENST00000532700 CLTBP09497 229 aa20.81■□□□□ 0.92
SMG1-203ENST00000532700 CDK7P50613 346 aa20.81■□□□□ 0.92
SMG1-203ENST00000532700 LRIT3Q3SXY7 679 aa20.81■□□□□ 0.92
SMG1-203ENST00000532700 CCDC178Q5BJE1 867 aa20.81■□□□□ 0.92
SMG1-203ENST00000532700 CXCL17Q6UXB2 119 aa20.81■□□□□ 0.92
SMG1-203ENST00000532700 NOL8Q76FK4 1167 aaKnown RBP20.81■□□□□ 0.92
SMG1-203ENST00000532700 ANKRD33Q7Z3H0 272 aa20.81■□□□□ 0.92
SMG1-203ENST00000532700 MB21D2Q8IYB1 491 aaPredicted RBP20.81■□□□□ 0.92
SMG1-203ENST00000532700 BAZ2BQ9UIF8 2168 aaKnown RBP20.8■□□□□ 0.92
SMG1-203ENST00000532700 DYNC1LI2O43237 492 aaPredicted RBP20.8■□□□□ 0.92
SMG1-203ENST00000532700 EDNRBP24530 442 aa20.8■□□□□ 0.92
SMG1-203ENST00000532700 NT5C2P49902 561 aa20.8■□□□□ 0.92
SMG1-203ENST00000532700 SHHQ15465 462 aa20.8■□□□□ 0.92
SMG1-203ENST00000532700 KIAA1211Q6ZU35 1233 aa20.8■□□□□ 0.92
SMG1-203ENST00000532700 PPP1R13LQ8WUF5 828 aa20.8■□□□□ 0.92
SMG1-203ENST00000532700 COPS5Q92905 334 aa20.8■□□□□ 0.92
SMG1-203ENST00000532700 LBHD1Q9BQE6 289 aaPredicted RBP20.8■□□□□ 0.92
SMG1-203ENST00000532700 VTA1Q9NP79 307 aa20.8■□□□□ 0.92
SMG1-203ENST00000532700 PRKAG2Q9UGJ0 569 aa20.8■□□□□ 0.92
SMG1-203ENST00000532700 PALM3A6NDB9 673 aaPredicted RBP20.79■□□□□ 0.92
SMG1-203ENST00000532700 RBAK-RBAKDNI3L0D1 243 aa20.79■□□□□ 0.92
SMG1-203ENST00000532700 KIAA0355O15063 1070 aa20.79■□□□□ 0.92
SMG1-203ENST00000532700 PSMC6P62333 389 aa20.79■□□□□ 0.92
SMG1-203ENST00000532700 FSCN1Q16658 493 aaKnown RBP20.79■□□□□ 0.92
SMG1-203ENST00000532700 SYTL5Q8TDW5 730 aaPredicted RBP20.79■□□□□ 0.92
SMG1-203ENST00000532700 MTMR8Q96EF0 704 aa20.79■□□□□ 0.92
SMG1-203ENST00000532700 TAAR1Q96RJ0 339 aa20.79■□□□□ 0.92
SMG1-203ENST00000532700 ESYT1Q9BSJ8 1104 aa20.79■□□□□ 0.92
SMG1-203ENST00000532700 TBX21Q9UL17 535 aa20.79■□□□□ 0.92
SMG1-203ENST00000532700 RBM47A0AV96 593 aaKnown RBP20.78■□□□□ 0.92
SMG1-203ENST00000532700 KLRF2D3W0D1 207 aa20.78■□□□□ 0.92
SMG1-203ENST00000532700 IFIT3O14879 490 aaKnown RBP20.78■□□□□ 0.92
SMG1-203ENST00000532700 CYTH3O43739 400 aa20.78■□□□□ 0.92
SMG1-203ENST00000532700 DHX16O60231 1041 aaKnown RBP20.78■□□□□ 0.92
SMG1-203ENST00000532700 ARIH2O95376 493 aa20.78■□□□□ 0.92
SMG1-203ENST00000532700 GRM4Q14833 912 aa20.78■□□□□ 0.92
SMG1-203ENST00000532700 PCSK9Q8NBP7 692 aaKnown RBP20.78■□□□□ 0.92
SMG1-203ENST00000532700 IGDCC4Q8TDY8 1250 aa20.78■□□□□ 0.92
SMG1-203ENST00000532700 NUP133Q8WUM0 1156 aa20.78■□□□□ 0.92
SMG1-203ENST00000532700 GLT1D1Q96MS3 346 aa20.78■□□□□ 0.92
SMG1-203ENST00000532700 MYL10Q9BUA6 226 aa20.78■□□□□ 0.92
SMG1-203ENST00000532700 ADD3Q9UEY8 706 aaKnown RBP20.78■□□□□ 0.92
SMG1-203ENST00000532700 LAMA2P24043 3122 aaKnown RBP20.78■□□□□ 0.92
SMG1-203ENST00000532700 ELP1O95163 1332 aa20.78■□□□□ 0.92
SMG1-203ENST00000532700 ABCB11O95342 1321 aa20.78■□□□□ 0.92
SMG1-203ENST00000532700 TROAPQ12815 778 aa20.77■□□□□ 0.92
SMG1-203ENST00000532700 DUSP28Q4G0W2 176 aa20.77■□□□□ 0.92
SMG1-203ENST00000532700 IQSEC1Q6DN90 963 aa20.77■□□□□ 0.92
SMG1-203ENST00000532700 FAM126BQ8IXS8 530 aa20.77■□□□□ 0.92
SMG1-203ENST00000532700 NCOA7Q8NI08 942 aa20.77■□□□□ 0.92
SMG1-203ENST00000532700 WDR11Q9BZH6 1224 aa20.77■□□□□ 0.92
SMG1-203ENST00000532700 A0A0U1RQG5 324 aaPredicted RBP20.76■□□□□ 0.91
SMG1-203ENST00000532700 ARVCFO00192 962 aa20.76■□□□□ 0.91
SMG1-203ENST00000532700 SLC27A2O14975 620 aa20.76■□□□□ 0.91
SMG1-203ENST00000532700 CENPQQ7L2Z9 268 aaPredicted RBP20.76■□□□□ 0.91
SMG1-203ENST00000532700 FBXO11Q86XK2 927 aa20.76■□□□□ 0.91
SMG1-203ENST00000532700 SLC43A3Q8NBI5 491 aa20.76■□□□□ 0.91
SMG1-203ENST00000532700 TOX2Q96NM4 488 aa20.76■□□□□ 0.91
SMG1-203ENST00000532700 PIGSQ96S52 555 aa20.76■□□□□ 0.91
SMG1-203ENST00000532700 SPC25Q9HBM1 224 aa20.76■□□□□ 0.91
SMG1-203ENST00000532700 TMEM39AQ9NV64 488 aa20.76■□□□□ 0.91
SMG1-203ENST00000532700 PDE4DQ08499 809 aa20.75■□□□□ 0.91
SMG1-203ENST00000532700 TRDNQ13061 729 aa20.75■□□□□ 0.91
SMG1-203ENST00000532700 TMEM67Q5HYA8 995 aa20.75■□□□□ 0.91
SMG1-203ENST00000532700 RALYLQ86SE5 291 aaKnown RBP20.75■□□□□ 0.91
SMG1-203ENST00000532700 RGS22Q8NE09 1264 aa20.75■□□□□ 0.91
SMG1-203ENST00000532700 VTI1AQ96AJ9 217 aa20.75■□□□□ 0.91
SMG1-203ENST00000532700 AP5M1Q9H0R1 490 aa20.75■□□□□ 0.91
SMG1-203ENST00000532700 LY9Q9HBG7 655 aa20.75■□□□□ 0.91
SMG1-203ENST00000532700 UMODL1Q5DID0 1318 aa20.75■□□□□ 0.91
SMG1-203ENST00000532700 SCN10AQ9Y5Y9 1956 aa20.74■□□□□ 0.91
SMG1-203ENST00000532700 CD4P01730 458 aa20.74■□□□□ 0.91
SMG1-203ENST00000532700 WTAPQ15007 396 aa20.74■□□□□ 0.91
SMG1-203ENST00000532700 HOMER1Q86YM7 354 aa20.74■□□□□ 0.91
SMG1-203ENST00000532700 DNERQ8NFT8 737 aa20.74■□□□□ 0.91
SMG1-203ENST00000532700 DCDC2CA8MYV0 355 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 RAG1P15918 1043 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 NECTIN1Q15223 517 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 BMP2KLQ5H9B9 411 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 CREB3L3Q68CJ9 461 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 C16orf59Q7L2K0 433 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 RAB11FIP4Q86YS3 637 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 IL31RAQ8NI17 732 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 PIBF1Q8WXW3 757 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 PPP1R12CQ9BZL4 782 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 TRPV6Q9H1D0 765 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 RIOX1Q9H6W3 641 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 PNMA2Q9UL42 364 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 Q9Y3F1 56 aa20.73■□□□□ 0.91
SMG1-203ENST00000532700 LOC102724159A0A0B4J2E5 919 aa20.72■□□□□ 0.91
SMG1-203ENST00000532700 ZBTB5O15062 677 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms