RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CCSAPQ6IQ19 270 aaPredicted RBP20.07■□□□□ 0.8
PHRF1-204ENST00000532550 TAPT1Q6NXT6 567 aa20.07■□□□□ 0.8
PHRF1-204ENST00000532550 CASC1Q6TDU7 716 aa20.07■□□□□ 0.8
PHRF1-204ENST00000532550 MCF2L2Q86YR7 1114 aa20.07■□□□□ 0.8
PHRF1-204ENST00000532550 FBXO16Q8IX29 292 aaPredicted RBP20.07■□□□□ 0.8
PHRF1-204ENST00000532550 DNERQ8NFT8 737 aa20.07■□□□□ 0.8
PHRF1-204ENST00000532550 GLT1D1Q96MS3 346 aa20.07■□□□□ 0.8
PHRF1-204ENST00000532550 ANO2Q9NQ90 1003 aa20.07■□□□□ 0.8
PHRF1-204ENST00000532550 PRDM5Q9NQX1 630 aaPredicted RBP20.07■□□□□ 0.8
PHRF1-204ENST00000532550 MRPL11Q9Y3B7 192 aaKnown RBP20.07■□□□□ 0.8
PHRF1-204ENST00000532550 MYH6P13533 1939 aa20.07■□□□□ 0.8
PHRF1-204ENST00000532550 DYNC1LI2O43237 492 aaPredicted RBP20.06■□□□□ 0.8
PHRF1-204ENST00000532550 ASGR1P07306 291 aa20.06■□□□□ 0.8
PHRF1-204ENST00000532550 SMPD1P17405 629 aa20.06■□□□□ 0.8
PHRF1-204ENST00000532550 IRX5P78411 483 aaPredicted RBP20.06■□□□□ 0.8
PHRF1-204ENST00000532550 PDE4DQ08499 809 aa20.06■□□□□ 0.8
PHRF1-204ENST00000532550 CATIPQ7Z7H3 387 aa20.06■□□□□ 0.8
PHRF1-204ENST00000532550 IGDCC4Q8TDY8 1250 aa20.06■□□□□ 0.8
PHRF1-204ENST00000532550 AMNQ9BXJ7 453 aa20.06■□□□□ 0.8
PHRF1-204ENST00000532550 GNEQ9Y223 722 aaKnown RBP20.06■□□□□ 0.8
PHRF1-204ENST00000532550 SLC27A2O14975 620 aa20.05■□□□□ 0.8
PHRF1-204ENST00000532550 GRM4Q14833 912 aa20.05■□□□□ 0.8
PHRF1-204ENST00000532550 MB21D2Q8IYB1 491 aaPredicted RBP20.05■□□□□ 0.8
PHRF1-204ENST00000532550 SENP2Q9HC62 589 aa20.05■□□□□ 0.8
PHRF1-204ENST00000532550 Q9Y3F1 56 aa20.05■□□□□ 0.8
PHRF1-204ENST00000532550 ELP1O95163 1332 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 LCTP09848 1927 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 ZEB2O60315 1214 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 PQBP1O60828 265 aaKnown RBP20.04■□□□□ 0.8
PHRF1-204ENST00000532550 MCM5P33992 734 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 ANTXR2P58335 489 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 NKX3-2P78367 333 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 BEX3Q00994 111 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 NECTIN1Q15223 517 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 CREB3L3Q68CJ9 461 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 TLK2Q86UE8 772 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 TDHQ8IZJ6 230 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 TBC1D5Q92609 795 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 MTA3Q9BTC8 594 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 WDR11Q9BZH6 1224 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 PCDH10Q9P2E7 1040 aa20.04■□□□□ 0.8
PHRF1-204ENST00000532550 BAZ2BQ9UIF8 2168 aaKnown RBP20.04■□□□□ 0.8
PHRF1-204ENST00000532550 DCDC2CA8MYV0 355 aa20.03■□□□□ 0.8
PHRF1-204ENST00000532550 ZBTB5O15062 677 aa20.03■□□□□ 0.8
PHRF1-204ENST00000532550 NEFLP07196 543 aa20.03■□□□□ 0.8
PHRF1-204ENST00000532550 CLTBP09497 229 aa20.03■□□□□ 0.8
PHRF1-204ENST00000532550 TROAPQ12815 778 aa20.03■□□□□ 0.8
PHRF1-204ENST00000532550 TRAF1Q13077 416 aa20.03■□□□□ 0.8
PHRF1-204ENST00000532550 FSCN1Q16658 493 aaKnown RBP20.03■□□□□ 0.8
PHRF1-204ENST00000532550 RNF20Q5VTR2 975 aa20.03■□□□□ 0.8
PHRF1-204ENST00000532550 TMTC2Q8N394 836 aa20.03■□□□□ 0.8
PHRF1-204ENST00000532550 TOX2Q96NM4 488 aa20.03■□□□□ 0.8
PHRF1-204ENST00000532550 PDLIM7Q9NR12 457 aa20.03■□□□□ 0.8
PHRF1-204ENST00000532550 CTAGE5O15320 804 aa20.02■□□□□ 0.8
PHRF1-204ENST00000532550 PRC1O43663 620 aa20.02■□□□□ 0.8
PHRF1-204ENST00000532550 CDC45O75419 566 aa20.02■□□□□ 0.8
PHRF1-204ENST00000532550 DUSP28Q4G0W2 176 aa20.02■□□□□ 0.8
PHRF1-204ENST00000532550 SH3RF1Q7Z6J0 888 aa20.02■□□□□ 0.8
PHRF1-204ENST00000532550 HOMER1Q86YM7 354 aa20.02■□□□□ 0.8
PHRF1-204ENST00000532550 SYTL5Q8TDW5 730 aaPredicted RBP20.02■□□□□ 0.8
PHRF1-204ENST00000532550 NSUN6Q8TEA1 469 aaKnown RBP20.02■□□□□ 0.8
PHRF1-204ENST00000532550 MTMR8Q96EF0 704 aa20.02■□□□□ 0.8
PHRF1-204ENST00000532550 TAAR1Q96RJ0 339 aa20.02■□□□□ 0.8
PHRF1-204ENST00000532550 RIOX1Q9H6W3 641 aa20.02■□□□□ 0.8
PHRF1-204ENST00000532550 TMEM39AQ9NV64 488 aa20.02■□□□□ 0.8
PHRF1-204ENST00000532550 PCDHA1Q9Y5I3 950 aa20.02■□□□□ 0.8
PHRF1-204ENST00000532550 A0A0U1RQG5 324 aaPredicted RBP20.01■□□□□ 0.79
PHRF1-204ENST00000532550 RBM47A0AV96 593 aaKnown RBP20.01■□□□□ 0.79
PHRF1-204ENST00000532550 TRIM43BA6NCK2 446 aa20.01■□□□□ 0.79
PHRF1-204ENST00000532550 CABYRO75952 493 aa20.01■□□□□ 0.79
PHRF1-204ENST00000532550 CFBP00751 764 aa20.01■□□□□ 0.79
PHRF1-204ENST00000532550 EDNRBP24530 442 aa20.01■□□□□ 0.79
PHRF1-204ENST00000532550 TMEM63BQ5T3F8 832 aa20.01■□□□□ 0.79
PHRF1-204ENST00000532550 NFXL1Q6ZNB6 911 aa20.01■□□□□ 0.79
PHRF1-204ENST00000532550 ANKRD33Q7Z3H0 272 aa20.01■□□□□ 0.79
PHRF1-204ENST00000532550 TRIM43Q96BQ3 446 aaPredicted RBP20.01■□□□□ 0.79
PHRF1-204ENST00000532550 TMEM87BQ96K49 555 aa20.01■□□□□ 0.79
PHRF1-204ENST00000532550 PIGSQ96S52 555 aa20.01■□□□□ 0.79
PHRF1-204ENST00000532550 LY9Q9HBG7 655 aa20.01■□□□□ 0.79
PHRF1-204ENST00000532550 MROH7Q68CQ1 1323 aa20.01■□□□□ 0.79
PHRF1-204ENST00000532550 CCDC69A6NI79 296 aa20■□□□□ 0.79
PHRF1-204ENST00000532550 ARVCFO00192 962 aa20■□□□□ 0.79
PHRF1-204ENST00000532550 CXCL17Q6UXB2 119 aa20■□□□□ 0.79
PHRF1-204ENST00000532550 ZNF654Q8IZM8 581 aa20■□□□□ 0.79
PHRF1-204ENST00000532550 CTCFLQ8NI51 663 aaPredicted RBP20■□□□□ 0.79
PHRF1-204ENST00000532550 SCFD2Q8WU76 684 aa20■□□□□ 0.79
PHRF1-204ENST00000532550 BADQ92934 168 aa20■□□□□ 0.79
PHRF1-204ENST00000532550 IWS1Q96ST2 819 aa20■□□□□ 0.79
PHRF1-204ENST00000532550 RMDN3Q96TC7 470 aa20■□□□□ 0.79
PHRF1-204ENST00000532550 MAP3K14Q99558 947 aa20■□□□□ 0.79
PHRF1-204ENST00000532550 MAP3K20Q9NYL2 800 aaKnown RBP20■□□□□ 0.79
PHRF1-204ENST00000532550 PNMA6FA0A0J9YX94 578 aa19.99■□□□□ 0.79
PHRF1-204ENST00000532550 NKRFO15226 690 aaKnown RBP eCLIP19.99■□□□□ 0.79
PHRF1-204ENST00000532550 DDAH1O94760 285 aa19.99■□□□□ 0.79
PHRF1-204ENST00000532550 RAG1P15918 1043 aa19.99■□□□□ 0.79
PHRF1-204ENST00000532550 PTGS1P23219 599 aa19.99■□□□□ 0.79
PHRF1-204ENST00000532550 KIF5BP33176 963 aa19.99■□□□□ 0.79
PHRF1-204ENST00000532550 CDK7P50613 346 aa19.99■□□□□ 0.79
PHRF1-204ENST00000532550 FAAP100Q0VG06 881 aa19.99■□□□□ 0.79
PHRF1-204ENST00000532550 STXBP2Q15833 593 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms