RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 SEZ6LQ9BYH1 1024 aa17.87■□□□□ 0.45
BRPF3-210ENST00000532538 PRDM12Q9H4Q4 367 aa17.87■□□□□ 0.45
BRPF3-210ENST00000532538 POLR3EQ9NVU0 708 aa17.87■□□□□ 0.45
BRPF3-210ENST00000532538 Q9Y3F1 56 aa17.87■□□□□ 0.45
BRPF3-210ENST00000532538 SCN5AQ14524 2016 aa17.87■□□□□ 0.45
BRPF3-210ENST00000532538 NFIBO00712 420 aa17.86■□□□□ 0.45
BRPF3-210ENST00000532538 B4GALT4O60513 344 aa17.86■□□□□ 0.45
BRPF3-210ENST00000532538 HSPD1P10809 573 aaKnown RBP17.86■□□□□ 0.45
BRPF3-210ENST00000532538 CPT1AP50416 773 aa17.86■□□□□ 0.45
BRPF3-210ENST00000532538 MFAP1P55081 439 aaKnown RBP17.86■□□□□ 0.45
BRPF3-210ENST00000532538 NKX3-2P78367 333 aa17.86■□□□□ 0.45
BRPF3-210ENST00000532538 NMIQ13287 307 aaPredicted RBP17.86■□□□□ 0.45
BRPF3-210ENST00000532538 DUSP28Q4G0W2 176 aa17.86■□□□□ 0.45
BRPF3-210ENST00000532538 TMEM63BQ5T3F8 832 aa17.86■□□□□ 0.45
BRPF3-210ENST00000532538 LNPKQ9C0E8 428 aa17.86■□□□□ 0.45
BRPF3-210ENST00000532538 SLC28A3Q9HAS3 691 aa17.86■□□□□ 0.45
BRPF3-210ENST00000532538 PNMA2Q9UL42 364 aa17.86■□□□□ 0.45
BRPF3-210ENST00000532538 UMODL1Q5DID0 1318 aa17.86■□□□□ 0.45
BRPF3-210ENST00000532538 RAD50Q92878 1312 aa17.86■□□□□ 0.45
BRPF3-210ENST00000532538 TRIP12Q14669 1992 aaPredicted RBP17.86■□□□□ 0.45
BRPF3-210ENST00000532538 MYH7BA7E2Y1 1941 aa17.85■□□□□ 0.45
BRPF3-210ENST00000532538 B4DLN1 442 aa17.85■□□□□ 0.45
BRPF3-210ENST00000532538 MRPL12P52815 198 aaKnown RBP17.85■□□□□ 0.45
BRPF3-210ENST00000532538 B4GALNT3Q6L9W6 998 aa17.85■□□□□ 0.45
BRPF3-210ENST00000532538 CCDC171Q6TFL3 1326 aa17.85■□□□□ 0.45
BRPF3-210ENST00000532538 BTNL9Q6UXG8 535 aa17.85■□□□□ 0.45
BRPF3-210ENST00000532538 HERVK_113Q902F9 699 aa17.85■□□□□ 0.45
BRPF3-210ENST00000532538 SALL3Q9BXA9 1300 aa17.85■□□□□ 0.45
BRPF3-210ENST00000532538 NKX2-4Q9H2Z4 354 aa17.85■□□□□ 0.45
BRPF3-210ENST00000532538 RNF41Q9H4P4 317 aaPredicted RBP17.85■□□□□ 0.45
BRPF3-210ENST00000532538 LAMA2P24043 3122 aaKnown RBP17.84■□□□□ 0.45
BRPF3-210ENST00000532538 SUPT20HL2P0C7V6 817 aa17.84■□□□□ 0.45
BRPF3-210ENST00000532538 PDHBP11177 359 aa17.84■□□□□ 0.45
BRPF3-210ENST00000532538 PPP2R5BQ15173 497 aa17.84■□□□□ 0.45
BRPF3-210ENST00000532538 CCDC85BQ15834 202 aaPredicted RBP17.84■□□□□ 0.45
BRPF3-210ENST00000532538 USH1GQ495M9 461 aa17.84■□□□□ 0.45
BRPF3-210ENST00000532538 AKNAD1Q5T1N1 836 aa17.84■□□□□ 0.45
BRPF3-210ENST00000532538 SLC30A10Q6XR72 485 aa17.84■□□□□ 0.45
BRPF3-210ENST00000532538 SLC43A3Q8NBI5 491 aa17.84■□□□□ 0.45
BRPF3-210ENST00000532538 SCLYQ96I15 445 aa17.84■□□□□ 0.45
BRPF3-210ENST00000532538 ZKSCAN3Q9BRR0 538 aa17.84■□□□□ 0.45
BRPF3-210ENST00000532538 NOC4LQ9BVI4 516 aaKnown RBP17.84■□□□□ 0.45
BRPF3-210ENST00000532538 TCP11L1Q9NUJ3 509 aa17.84■□□□□ 0.45
BRPF3-210ENST00000532538 CXXC1Q9P0U4 656 aaPredicted RBP17.84■□□□□ 0.45
BRPF3-210ENST00000532538 SLC4A7Q9Y6M7 1214 aa17.84■□□□□ 0.45
BRPF3-210ENST00000532538 GRIN2DO15399 1336 aa17.83■□□□□ 0.44
BRPF3-210ENST00000532538 DHX16O60231 1041 aaKnown RBP17.83■□□□□ 0.44
BRPF3-210ENST00000532538 FGRP09769 529 aa17.83■□□□□ 0.44
BRPF3-210ENST00000532538 DEFB128Q7Z7B8 93 aa17.83■□□□□ 0.44
BRPF3-210ENST00000532538 ZNF589Q86UQ0 364 aaPredicted RBP17.83■□□□□ 0.44
BRPF3-210ENST00000532538 USP38Q8NB14 1042 aa17.83■□□□□ 0.44
BRPF3-210ENST00000532538 IL27Q8NEV9 243 aa17.83■□□□□ 0.44
BRPF3-210ENST00000532538 ESR2Q92731 530 aa17.83■□□□□ 0.44
BRPF3-210ENST00000532538 TTC14Q96N46 770 aa17.83■□□□□ 0.44
BRPF3-210ENST00000532538 MTG1Q9BT17 334 aaPredicted RBP17.83■□□□□ 0.44
BRPF3-210ENST00000532538 ALDH8A1Q9H2A2 487 aaPredicted RBP17.83■□□□□ 0.44
BRPF3-210ENST00000532538 NOD1Q9Y239 953 aa17.83■□□□□ 0.44
BRPF3-210ENST00000532538 KIAA1217Q5T5P2 1943 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 TNKSO95271 1327 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 ZNF213O14771 459 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 GOLGA8HP0CJ92 632 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 PCP11498 1178 aaKnown RBP17.82■□□□□ 0.44
BRPF3-210ENST00000532538 CYP2C9P11712 490 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 NOVP48745 357 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 RABGGTBP53611 331 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 RPS6P62753 249 aaKnown RBP17.82■□□□□ 0.44
BRPF3-210ENST00000532538 ZNF543Q08ER8 600 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 RASIP1Q5U651 963 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 MICALL1Q8N3F8 863 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 MORC4Q8TE76 937 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 TRMT13Q9NUP7 481 aaKnown RBP17.82■□□□□ 0.44
BRPF3-210ENST00000532538 CUL9Q8IWT3 2517 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 LAMA4Q16363 1823 aa17.82■□□□□ 0.44
BRPF3-210ENST00000532538 LOC102724159A0A0B4J2E5 919 aa17.81■□□□□ 0.44
BRPF3-210ENST00000532538 NKRFO15226 690 aaKnown RBP eCLIP17.81■□□□□ 0.44
BRPF3-210ENST00000532538 HDAC1Q13547 482 aaPredicted RBP17.81■□□□□ 0.44
BRPF3-210ENST00000532538 PWP2Q15269 919 aaKnown RBP17.81■□□□□ 0.44
BRPF3-210ENST00000532538 TJAP1Q5JTD0 557 aa17.81■□□□□ 0.44
BRPF3-210ENST00000532538 PPP2R2DQ66LE6 453 aa17.81■□□□□ 0.44
BRPF3-210ENST00000532538 IQCA1Q86XH1 822 aa17.81■□□□□ 0.44
BRPF3-210ENST00000532538 RETREG2Q8NC44 543 aa17.81■□□□□ 0.44
BRPF3-210ENST00000532538 SCFD2Q8WU76 684 aa17.81■□□□□ 0.44
BRPF3-210ENST00000532538 UBA5Q9GZZ9 404 aa17.81■□□□□ 0.44
BRPF3-210ENST00000532538 WNT8AQ9H1J5 351 aa17.81■□□□□ 0.44
BRPF3-210ENST00000532538 PRDM6Q9NQX0 595 aa17.81■□□□□ 0.44
BRPF3-210ENST00000532538 DIAPH3Q9NSV4 1193 aa17.81■□□□□ 0.44
BRPF3-210ENST00000532538 UNC80Q8N2C7 3258 aa17.8■□□□□ 0.44
BRPF3-210ENST00000532538 ZMYM6O95789 1325 aa17.8■□□□□ 0.44
BRPF3-210ENST00000532538 TXNP10599 105 aaKnown RBP17.8■□□□□ 0.44
BRPF3-210ENST00000532538 ACTN1P12814 892 aa17.8■□□□□ 0.44
BRPF3-210ENST00000532538 PURAQ00577 322 aaKnown RBP17.8■□□□□ 0.44
BRPF3-210ENST00000532538 TTLL4Q14679 1199 aa17.8■□□□□ 0.44
BRPF3-210ENST00000532538 GPATCH4Q5T3I0 446 aaKnown RBP17.8■□□□□ 0.44
BRPF3-210ENST00000532538 TBC1D10CQ8IV04 446 aa17.8■□□□□ 0.44
BRPF3-210ENST00000532538 DNERQ8NFT8 737 aa17.8■□□□□ 0.44
BRPF3-210ENST00000532538 PPP1R13LQ8WUF5 828 aa17.8■□□□□ 0.44
BRPF3-210ENST00000532538 CLEC4DQ8WXI8 215 aa17.8■□□□□ 0.44
BRPF3-210ENST00000532538 FTOQ9C0B1 505 aaKnown RBP eCLIP17.8■□□□□ 0.44
BRPF3-210ENST00000532538 RWDD1Q9H446 243 aaPredicted RBP17.8■□□□□ 0.44
BRPF3-210ENST00000532538 KAT14Q9H8E8 782 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms