RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 NPY5RQ15761 445 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 NOM1Q5C9Z4 860 aaKnown RBP9.26□□□□□ -0.93
TRIM49-202ENST00000532501 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 SLC30A10Q6XR72 485 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 SYNE3Q6ZMZ3 975 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 GPRC5AQ8NFJ5 357 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 DDX11Q96FC9 970 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 SLC26A6Q9BXS9 759 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 TEX13BQ9BXU2 312 aa9.26□□□□□ -0.93
TRIM49-202ENST00000532501 RBM28Q9NW13 759 aaKnown RBP9.26□□□□□ -0.93
TRIM49-202ENST00000532501 COBLO75128 1261 aa9.25□□□□□ -0.93
TRIM49-202ENST00000532501 FMNL1O95466 1100 aaPredicted RBP9.25□□□□□ -0.93
TRIM49-202ENST00000532501 PSMC4P43686 418 aa9.25□□□□□ -0.93
TRIM49-202ENST00000532501 GNAQP50148 359 aa9.25□□□□□ -0.93
TRIM49-202ENST00000532501 SP3Q02447 781 aa9.25□□□□□ -0.93
TRIM49-202ENST00000532501 CUL4AQ13619 759 aa9.25□□□□□ -0.93
TRIM49-202ENST00000532501 GPR142Q7Z601 462 aa9.25□□□□□ -0.93
TRIM49-202ENST00000532501 NCAPG2Q86XI2 1143 aa9.25□□□□□ -0.93
TRIM49-202ENST00000532501 FBXO11Q86XK2 927 aa9.25□□□□□ -0.93
TRIM49-202ENST00000532501 MB21D1Q8N884 522 aa9.25□□□□□ -0.93
TRIM49-202ENST00000532501 SMARCC2Q8TAQ2 1214 aa9.25□□□□□ -0.93
TRIM49-202ENST00000532501 A1CFQ9NQ94 594 aaKnown RBP9.25□□□□□ -0.93
TRIM49-202ENST00000532501 VPS54Q9P1Q0 977 aa9.25□□□□□ -0.93
TRIM49-202ENST00000532501 GJD2Q9UKL4 321 aa9.25□□□□□ -0.93
TRIM49-202ENST00000532501 CENPFP49454 3210 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 PNMA6FA0A0J9YX94 578 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 FKTNO75072 461 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 PGK2P07205 417 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 MCM2P49736 904 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 CNTN2Q02246 1040 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 PRKCZQ05513 592 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 CCL14Q16627 93 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 UBE2SQ16763 222 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 PFKFB3Q16875 520 aaPredicted RBP9.24□□□□□ -0.93
TRIM49-202ENST00000532501 MORN1Q5T089 497 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 WDR78Q5VTH9 848 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 OTOP1Q7RTM1 612 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 HEATR3Q7Z4Q2 680 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 NPLOC4Q8TAT6 608 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 RASGRP4Q8TDF6 673 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 GTF3C2Q8WUA4 911 aaPredicted RBP9.24□□□□□ -0.93
TRIM49-202ENST00000532501 USP6NLQ92738 828 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 SNX21Q969T3 373 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 RRP36Q96EU6 259 aaKnown RBP9.24□□□□□ -0.93
TRIM49-202ENST00000532501 TRERF1Q96PN7 1200 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 RNF26Q9BY78 433 aaPredicted RBP9.24□□□□□ -0.93
TRIM49-202ENST00000532501 ORC3Q9UBD5 711 aaPredicted RBP9.24□□□□□ -0.93
TRIM49-202ENST00000532501 DOCK3Q8IZD9 2030 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 PLXNB2O15031 1838 aa9.24□□□□□ -0.93
TRIM49-202ENST00000532501 DNAJC25-GNG10A0A024R161 153 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 K7ELQ4 463 aaPredicted RBP9.23□□□□□ -0.93
TRIM49-202ENST00000532501 PRPF3O43395 683 aaKnown RBP9.23□□□□□ -0.93
TRIM49-202ENST00000532501 SCG2P13521 617 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 PTGS1P23219 599 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 PTPREP23469 700 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 SMARCA1P28370 1054 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 ADORA2AP29274 412 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 HOXA13P31271 388 aaPredicted RBP9.23□□□□□ -0.93
TRIM49-202ENST00000532501 CTCFP49711 727 aaPredicted RBP9.23□□□□□ -0.93
TRIM49-202ENST00000532501 PSEN2P49810 448 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 OAZ1P54368 228 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 TRIM32Q13049 653 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 BAATQ14032 418 aaPredicted RBP9.23□□□□□ -0.93
TRIM49-202ENST00000532501 GRB14Q14449 540 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 NSMFQ6X4W1 530 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 SHCBP1Q8NEM2 672 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 IL31RAQ8NI17 732 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 PGBD1Q96JS3 809 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 LZTS2Q9BRK4 669 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 BEGAINQ9BUH8 593 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 AMNQ9BXJ7 453 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 SH2B1Q9NRF2 756 aaPredicted RBP9.23□□□□□ -0.93
TRIM49-202ENST00000532501 FLRT1Q9NZU1 646 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 KCNJ14Q9UNX9 436 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 PCDHGA4Q9Y5G9 962 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 PCDHA1Q9Y5I3 950 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 CASP8AP2Q9UKL3 1982 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 STK36Q9NRP7 1315 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 LCTP09848 1927 aa9.23□□□□□ -0.93
TRIM49-202ENST00000532501 CCDC196A0A1B0GTZ2 297 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 SOWAHBA6NEL2 793 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 MEIS2O14770 477 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 TNPO2O14787 897 aaKnown RBP9.22□□□□□ -0.93
TRIM49-202ENST00000532501 CPLX1O14810 134 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 EDIL3O43854 480 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 FLT3LGP49771 235 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 RPS6P62753 249 aaKnown RBP9.22□□□□□ -0.93
TRIM49-202ENST00000532501 GUCY1B3Q02153 619 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 USP17L6PQ6QN14 398 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.22□□□□□ -0.93
TRIM49-202ENST00000532501 PLEKHH3Q7Z736 793 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 OXER1Q8TDS5 423 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 SYTL5Q8TDW5 730 aaPredicted RBP9.22□□□□□ -0.93
TRIM49-202ENST00000532501 ZFP91Q96JP5 570 aaPredicted RBP9.22□□□□□ -0.93
TRIM49-202ENST00000532501 ZSCAN31Q96LW9 406 aaPredicted RBP9.22□□□□□ -0.93
TRIM49-202ENST00000532501 ACAD9Q9H845 621 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 TMEM260Q9NX78 707 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 BARHL2Q9NY43 387 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 CYP39A1Q9NYL5 469 aa9.22□□□□□ -0.93
TRIM49-202ENST00000532501 SLC25A27O95847 323 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms