RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 CA12O43570 354 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 TLR2O60603 784 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 COPB2P35606 906 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 HSD17B4P51659 736 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 GNL2Q13823 731 aaKnown RBP20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 UBE2SQ16763 222 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 FAM110CQ1W6H9 321 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 USP17L6PQ6QN14 398 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 BRAPQ7Z569 592 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 NOSTRINQ8IVI9 506 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 TNS4Q8IZW8 715 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 SAMD3Q8N6K7 520 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 SHCBP1Q8NEM2 672 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 ACAD9Q9H845 621 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 ZFYVE28Q9HCC9 887 aa20.58■□□□□ 0.89
PPP1CA-208ENST00000532446 GCOM1H8Y6P7 765 aaPredicted RBP20.57■□□□□ 0.88
PPP1CA-208ENST00000532446 CFBP00751 764 aa20.57■□□□□ 0.88
PPP1CA-208ENST00000532446 POLR2MP0CAP2 368 aa20.57■□□□□ 0.88
PPP1CA-208ENST00000532446 BCRP11274 1271 aa20.57■□□□□ 0.88
PPP1CA-208ENST00000532446 CRHR2Q13324 411 aa20.57■□□□□ 0.88
PPP1CA-208ENST00000532446 EARS2Q5JPH6 523 aaKnown RBP20.57■□□□□ 0.88
PPP1CA-208ENST00000532446 MAF1Q9H063 256 aa20.57■□□□□ 0.88
PPP1CA-208ENST00000532446 TMEM260Q9NX78 707 aa20.57■□□□□ 0.88
PPP1CA-208ENST00000532446 MAP3K20Q9NYL2 800 aaKnown RBP20.57■□□□□ 0.88
PPP1CA-208ENST00000532446 BIN2Q9UBW5 565 aaPredicted RBP20.57■□□□□ 0.88
PPP1CA-208ENST00000532446 FBXO40Q9UH90 709 aa20.57■□□□□ 0.88
PPP1CA-208ENST00000532446 TCHHQ07283 1943 aa20.57■□□□□ 0.88
PPP1CA-208ENST00000532446 ERCC3P19447 782 aa20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 CCNA1P78396 465 aa20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 NOM1Q5C9Z4 860 aaKnown RBP20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 JAKMIP3Q5VZ66 844 aa20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 C17orf99Q6UX52 265 aa20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 NCAPG2Q86XI2 1143 aa20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 BEGAINQ9BUH8 593 aa20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 CPA4Q9UI42 421 aa20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 ZNFX1Q9P2E3 1918 aaKnown RBP20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 HOXA13P31271 388 aaPredicted RBP20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 MCTP2Q6DN12 878 aa20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 KRT25Q7Z3Z0 450 aa20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 PORCNQ9H237 461 aa20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 R3HDMLQ9H3Y0 253 aa20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 MROH8Q9H579 483 aa20.56■□□□□ 0.88
PPP1CA-208ENST00000532446 MYH7BA7E2Y1 1941 aa20.55■□□□□ 0.88
PPP1CA-208ENST00000532446 FAM205CA6NFA0 338 aa20.55■□□□□ 0.88
PPP1CA-208ENST00000532446 HSPA8P11142 646 aaKnown RBP20.55■□□□□ 0.88
PPP1CA-208ENST00000532446 LBX1P52954 281 aa20.55■□□□□ 0.88
PPP1CA-208ENST00000532446 AP3B2Q13367 1082 aa20.55■□□□□ 0.88
PPP1CA-208ENST00000532446 PIK3AP1Q6ZUJ8 805 aa20.55■□□□□ 0.88
PPP1CA-208ENST00000532446 TNPO1Q92973 898 aaKnown RBP20.55■□□□□ 0.88
PPP1CA-208ENST00000532446 A1CFQ9NQ94 594 aaKnown RBP20.55■□□□□ 0.88
PPP1CA-208ENST00000532446 CCDC194A0A1B0GVG4 234 aa20.54■□□□□ 0.88
PPP1CA-208ENST00000532446 FOSP01100 380 aaPredicted RBP20.54■□□□□ 0.88
PPP1CA-208ENST00000532446 RPS6P62753 249 aaKnown RBP20.54■□□□□ 0.88
PPP1CA-208ENST00000532446 MYSM1Q5VVJ2 828 aa20.54■□□□□ 0.88
PPP1CA-208ENST00000532446 FAM173BQ6P4H8 233 aa20.54■□□□□ 0.88
PPP1CA-208ENST00000532446 NSMFQ6X4W1 530 aa20.54■□□□□ 0.88
PPP1CA-208ENST00000532446 RNF207Q6ZRF8 634 aa20.54■□□□□ 0.88
PPP1CA-208ENST00000532446 ATP6V1DQ9Y5K8 247 aa20.54■□□□□ 0.88
PPP1CA-208ENST00000532446 LCTP09848 1927 aa20.54■□□□□ 0.88
PPP1CA-208ENST00000532446 PLXNB2O15031 1838 aa20.53■□□□□ 0.88
PPP1CA-208ENST00000532446 BAATQ14032 418 aaPredicted RBP20.53■□□□□ 0.88
PPP1CA-208ENST00000532446 NONOQ15233 471 aaKnown RBP eCLIP20.53■□□□□ 0.88
PPP1CA-208ENST00000532446 SLC30A10Q6XR72 485 aa20.53■□□□□ 0.88
PPP1CA-208ENST00000532446 SYTL5Q8TDW5 730 aaPredicted RBP20.53■□□□□ 0.88
PPP1CA-208ENST00000532446 CFHR5Q9BXR6 569 aa20.53■□□□□ 0.88
PPP1CA-208ENST00000532446 EFCC1Q9HA90 598 aa20.53■□□□□ 0.88
PPP1CA-208ENST00000532446 CYP39A1Q9NYL5 469 aa20.53■□□□□ 0.88
PPP1CA-208ENST00000532446 COL20A1Q9P218 1284 aa20.53■□□□□ 0.88
PPP1CA-208ENST00000532446 SPDYE3A6NKU9 549 aa20.52■□□□□ 0.88
PPP1CA-208ENST00000532446 FCHSD1Q86WN1 690 aa20.52■□□□□ 0.88
PPP1CA-208ENST00000532446 PGBD1Q96JS3 809 aa20.52■□□□□ 0.88
PPP1CA-208ENST00000532446 ANO3Q9BYT9 981 aa20.52■□□□□ 0.88
PPP1CA-208ENST00000532446 PFASO15067 1338 aa20.52■□□□□ 0.88
PPP1CA-208ENST00000532446 TOB1P50616 345 aaPredicted RBP20.51■□□□□ 0.87
PPP1CA-208ENST00000532446 INF2Q27J81 1249 aa20.51■□□□□ 0.87
PPP1CA-208ENST00000532446 FOXD4L6Q3SYB3 417 aaPredicted RBP20.51■□□□□ 0.87
PPP1CA-208ENST00000532446 FOXD4L3Q6VB84 417 aaPredicted RBP20.51■□□□□ 0.87
PPP1CA-208ENST00000532446 ANKRD35Q8N283 1001 aa20.51■□□□□ 0.87
PPP1CA-208ENST00000532446 RNF186Q9NXI6 227 aa20.51■□□□□ 0.87
PPP1CA-208ENST00000532446 MAPK4P31152 587 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 TRAPPC10P48553 1259 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 RILPL1Q5EBL4 403 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 TBCKQ8TEA7 893 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 CHAMP1Q96JM3 812 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 NOL7Q9UMY1 257 aaKnown RBP20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 DOCK3Q8IZD9 2030 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 MGAMO43451 1857 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 FCER1AP12319 257 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 SREBF1P36956 1147 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 DNM1Q05193 864 aaKnown RBP20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 WDR78Q5VTH9 848 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 CLEC17AQ6ZS10 378 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 CCAR1Q8IX12 1150 aaKnown RBP20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 ABRAQ8N0Z2 381 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 CRYGNQ8WXF5 182 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 MMP19Q99542 508 aa20.5■□□□□ 0.87
PPP1CA-208ENST00000532446 FRMPD4Q14CM0 1322 aa20.49■□□□□ 0.87
PPP1CA-208ENST00000532446 RPTORQ8N122 1335 aa20.49■□□□□ 0.87
PPP1CA-208ENST00000532446 STRNO43815 780 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms