RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 CALM2P0DP24 149 aa16.55■□□□□ 0.24
NXF1-213ENST00000532297 CALM3P0DP25 149 aa16.55■□□□□ 0.24
NXF1-213ENST00000532297 TTMPQ5BVD1 217 aa16.55■□□□□ 0.24
NXF1-213ENST00000532297 MB21D1Q8N884 522 aa16.55■□□□□ 0.24
NXF1-213ENST00000532297 HPS3Q969F9 1004 aa16.55■□□□□ 0.24
NXF1-213ENST00000532297 ANO9A1A5B4 782 aa16.55■□□□□ 0.24
NXF1-213ENST00000532297 IPO7O95373 1038 aaKnown RBP16.55■□□□□ 0.24
NXF1-213ENST00000532297 RPN1P04843 607 aaKnown RBP16.55■□□□□ 0.24
NXF1-213ENST00000532297 FNTAP49354 379 aa16.55■□□□□ 0.24
NXF1-213ENST00000532297 TFAP4Q01664 338 aa16.55■□□□□ 0.24
NXF1-213ENST00000532297 BSDC1Q9NW68 430 aaPredicted RBP16.55■□□□□ 0.24
NXF1-213ENST00000532297 SUFUQ9UMX1 484 aa16.55■□□□□ 0.24
NXF1-213ENST00000532297 LAMB1P07942 1786 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 ZEB2O60315 1214 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 PARP1P09874 1014 aaKnown RBP16.54■□□□□ 0.24
NXF1-213ENST00000532297 CYLC1P35663 651 aaPredicted RBP16.54■□□□□ 0.24
NXF1-213ENST00000532297 MATR3P43243 847 aaKnown RBP eCLIP16.54■□□□□ 0.241e-14■■■■■ 51.7
NXF1-213ENST00000532297 ATP1A2P50993 1020 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 SKOR1P84550 965 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 SLC7A5Q01650 507 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 UBE4AQ14139 1066 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 CAPN11Q9UMQ6 739 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 KIAA1551Q9HCM1 1747 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 MEFVO15553 781 aaPredicted RBP16.54■□□□□ 0.24
NXF1-213ENST00000532297 HSF2BPO75031 334 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 DDAH1O94760 285 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 STAT6P42226 847 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 PFKFB3Q16875 520 aaPredicted RBP16.54■□□□□ 0.24
NXF1-213ENST00000532297 NAALADL2Q58DX5 795 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 HEATR3Q7Z4Q2 680 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 IRF2BP1Q8IU81 584 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 MMGT1Q8N4V1 131 aa16.54■□□□□ 0.24
NXF1-213ENST00000532297 TSEN2Q8NCE0 465 aaKnown RBP16.54■□□□□ 0.24
NXF1-213ENST00000532297 FSBPO95073 299 aa16.53■□□□□ 0.24
NXF1-213ENST00000532297 ZNF662Q6ZS27 426 aa16.53■□□□□ 0.24
NXF1-213ENST00000532297 SH3RF3Q8TEJ3 882 aaPredicted RBP16.53■□□□□ 0.24
NXF1-213ENST00000532297 SPATA31A1Q5TZJ5 1347 aa16.53■□□□□ 0.24
NXF1-213ENST00000532297 A6NNZ2 444 aa16.53■□□□□ 0.24
NXF1-213ENST00000532297 CYTH3O43739 400 aa16.53■□□□□ 0.24
NXF1-213ENST00000532297 EPB41P11171 864 aaKnown RBP16.53■□□□□ 0.24
NXF1-213ENST00000532297 TUBB8Q3ZCM7 444 aa16.53■□□□□ 0.24
NXF1-213ENST00000532297 KCTD16Q68DU8 428 aa16.53■□□□□ 0.24
NXF1-213ENST00000532297 CREG2Q8IUH2 290 aa16.53■□□□□ 0.24
NXF1-213ENST00000532297 SH2D3CQ8N5H7 860 aa16.53■□□□□ 0.24
NXF1-213ENST00000532297 C4orf32Q8N8J7 132 aa16.53■□□□□ 0.24
NXF1-213ENST00000532297 ATXN2Q99700 1313 aaKnown RBP16.53■□□□□ 0.24
NXF1-213ENST00000532297 LGALS16A8MUM7 142 aa16.52■□□□□ 0.24
NXF1-213ENST00000532297 EPHB4P54760 987 aa16.52■□□□□ 0.24
NXF1-213ENST00000532297 CYP27A1Q02318 531 aa16.52■□□□□ 0.24
NXF1-213ENST00000532297 FKBP15Q5T1M5 1219 aa16.52■□□□□ 0.24
NXF1-213ENST00000532297 ZNF658Q5TYW1 1059 aaPredicted RBP16.52■□□□□ 0.24
NXF1-213ENST00000532297 ALS2CLQ60I27 953 aa16.52■□□□□ 0.24
NXF1-213ENST00000532297 FBXO33Q7Z6M2 555 aa16.52■□□□□ 0.24
NXF1-213ENST00000532297 BLIDQ8IZY5 108 aa16.52■□□□□ 0.24
NXF1-213ENST00000532297 BANK1Q8NDB2 785 aa16.52■□□□□ 0.24
NXF1-213ENST00000532297 CRNKL1Q9BZJ0 848 aaKnown RBP16.52■□□□□ 0.24
NXF1-213ENST00000532297 NHEJ1Q9H9Q4 299 aaPredicted RBP16.52■□□□□ 0.24
NXF1-213ENST00000532297 HIBADHP31937 336 aaKnown RBP16.52■□□□□ 0.23
NXF1-213ENST00000532297 DDR1Q08345 913 aa16.52■□□□□ 0.23
NXF1-213ENST00000532297 PNMA1Q8ND90 353 aa16.52■□□□□ 0.23
NXF1-213ENST00000532297 UIMC1Q96RL1 719 aa16.52■□□□□ 0.23
NXF1-213ENST00000532297 CD248Q9HCU0 757 aa16.52■□□□□ 0.23
NXF1-213ENST00000532297 POLD4Q9HCU8 107 aa16.52■□□□□ 0.23
NXF1-213ENST00000532297 AGPAT5Q9NUQ2 364 aa16.52■□□□□ 0.23
NXF1-213ENST00000532297 ZNHIT6Q9NWK9 470 aaKnown RBP16.52■□□□□ 0.23
NXF1-213ENST00000532297 SNX12Q9UMY4 172 aa16.52■□□□□ 0.23
NXF1-213ENST00000532297 H7C1D1 291 aa16.51■□□□□ 0.23
NXF1-213ENST00000532297 GTPBP6O43824 516 aaPredicted RBP16.51■□□□□ 0.23
NXF1-213ENST00000532297 PCP11498 1178 aaKnown RBP16.51■□□□□ 0.23
NXF1-213ENST00000532297 KIF5AQ12840 1032 aa16.51■□□□□ 0.23
NXF1-213ENST00000532297 SPATS2Q86XZ4 545 aaKnown RBP16.51■□□□□ 0.23
NXF1-213ENST00000532297 FNBP4Q8N3X1 1017 aaPredicted RBP16.51■□□□□ 0.23
NXF1-213ENST00000532297 A0A1W2PQC6 194 aa16.51■□□□□ 0.23
NXF1-213ENST00000532297 FGRP09769 529 aa16.51■□□□□ 0.23
NXF1-213ENST00000532297 RDXP35241 583 aaKnown RBP16.51■□□□□ 0.23
NXF1-213ENST00000532297 MEA1Q16626 185 aa16.51■□□□□ 0.23
NXF1-213ENST00000532297 RPAINQ86UA6 219 aa16.51■□□□□ 0.23
NXF1-213ENST00000532297 DZIP1Q86YF9 867 aaKnown RBP16.51■□□□□ 0.23
NXF1-213ENST00000532297 SPATA4Q8NEY3 305 aa16.51■□□□□ 0.23
NXF1-213ENST00000532297 GIMAP7Q8NHV1 300 aa16.51■□□□□ 0.23
NXF1-213ENST00000532297 SMCR8Q8TEV9 937 aaPredicted RBP16.51■□□□□ 0.23
NXF1-213ENST00000532297 A1CFQ9NQ94 594 aaKnown RBP16.51■□□□□ 0.23
NXF1-213ENST00000532297 STX8Q9UNK0 236 aa16.51■□□□□ 0.23
NXF1-213ENST00000532297 ROBO1Q9Y6N7 1651 aa16.51■□□□□ 0.23
NXF1-213ENST00000532297 KIF1CO43896 1103 aaKnown RBP16.5■□□□□ 0.23
NXF1-213ENST00000532297 TRIM21P19474 475 aaKnown RBP16.5■□□□□ 0.23
NXF1-213ENST00000532297 NNTQ13423 1086 aa16.5■□□□□ 0.23
NXF1-213ENST00000532297 EMBQ6PCB8 327 aa16.5■□□□□ 0.23
NXF1-213ENST00000532297 EP400NLQ6ZTU2 488 aa16.5■□□□□ 0.23
NXF1-213ENST00000532297 MICALCLQ6ZW33 695 aa16.5■□□□□ 0.23
NXF1-213ENST00000532297 ZIM3Q96PE6 472 aa16.5■□□□□ 0.23
NXF1-213ENST00000532297 ZNF652Q9Y2D9 606 aa16.5■□□□□ 0.23
NXF1-213ENST00000532297 B4DLN1 442 aa16.5■□□□□ 0.23
NXF1-213ENST00000532297 KRT14P02533 472 aa16.5■□□□□ 0.23
NXF1-213ENST00000532297 RPS8P62241 208 aaKnown RBP16.5■□□□□ 0.23
NXF1-213ENST00000532297 SF3B3Q15393 1217 aaKnown RBP16.5■□□□□ 0.23
NXF1-213ENST00000532297 RNF187Q5TA31 235 aaPredicted RBP16.5■□□□□ 0.23
NXF1-213ENST00000532297 MAPKAPK5Q8IW41 473 aa16.5■□□□□ 0.23
NXF1-213ENST00000532297 ZNF507Q8TCN5 953 aa16.5■□□□□ 0.23
NXF1-213ENST00000532297 PURBQ96QR8 312 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms