RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 NHLH1Q02575 133 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 NBPF20Q3BBV1 942 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 LEXMQ3ZCV2 418 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 SLFN13Q68D06 897 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 GIMAP6Q6P9H5 292 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 EEPD1Q7L9B9 569 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 FTSJ3Q8IY81 847 aaKnown RBP9.31□□□□□ -0.92
NXF1-212ENST00000531872 LRRC47Q8N1G4 583 aaKnown RBP9.31□□□□□ -0.92
NXF1-212ENST00000531872 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.31□□□□□ -0.92
NXF1-212ENST00000531872 GDPD5Q8WTR4 605 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 SNX27Q96L92 541 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 STRBPQ96SI9 672 aaKnown RBP9.31□□□□□ -0.92
NXF1-212ENST00000531872 HAUS7Q99871 368 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 MTG1Q9BT17 334 aaPredicted RBP9.31□□□□□ -0.92
NXF1-212ENST00000531872 KCNH6Q9H252 994 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 CYP39A1Q9NYL5 469 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 LCTP09848 1927 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 MYH7P12883 1935 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 USP34Q70CQ2 3546 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 PLIN4Q96Q06 1357 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 RBM47A0AV96 593 aaKnown RBP9.3□□□□□ -0.92
NXF1-212ENST00000531872 PLA2G6O60733 806 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 ALAS1P13196 640 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 ALADP13716 330 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 CPT1AP50416 773 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 WDR5P61964 334 aaKnown RBP9.3□□□□□ -0.92
NXF1-212ENST00000531872 PTPN11Q06124 597 aaPredicted RBP9.3□□□□□ -0.92
NXF1-212ENST00000531872 GPNMBQ14956 572 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 MUM1L1Q5H9M0 696 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 ZSCAN25Q6NSZ9 544 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 NFRKBQ6P4R8 1299 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 FAM160B2Q86V87 743 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 STK11IPQ8N1F8 1099 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 RETREG2Q8NC44 543 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 CHURC1Q8WUH1 139 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 STAG1Q8WVM7 1258 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 WDR11Q9BZH6 1224 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 FTOQ9C0B1 505 aaKnown RBP eCLIP9.3□□□□□ -0.92
NXF1-212ENST00000531872 SUGCTQ9HAC7 445 aa9.3□□□□□ -0.92
NXF1-212ENST00000531872 LOC102724159A0A0B4J2E5 919 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 POTEB3A0JP26 581 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 MINDY4BA8MYZ0 360 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 PRDM1O75626 825 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 MYL3P08590 195 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 IL9P15248 144 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 KCNJ6P48051 423 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 ERVK-21P61565 698 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 BFSP2Q13515 415 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 PWP2Q15269 919 aaKnown RBP9.29□□□□□ -0.92
NXF1-212ENST00000531872 LRRFIP1Q32MZ4 808 aaKnown RBP9.29□□□□□ -0.92
NXF1-212ENST00000531872 POTEBQ6S5H4 581 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 ZNF444Q8N0Y2 327 aaPredicted RBP9.29□□□□□ -0.92
NXF1-212ENST00000531872 NEDD1Q8NHV4 660 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 FBXL18Q96ME1 805 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 PURBQ96QR8 312 aaKnown RBP9.29□□□□□ -0.92
NXF1-212ENST00000531872 ZNF287Q9HBT7 754 aa9.29□□□□□ -0.92
NXF1-212ENST00000531872 GPHNQ9NQX3 736 aaPredicted RBP9.29□□□□□ -0.92
NXF1-212ENST00000531872 LINC01553A4QN01 128 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 GRXCR2A6NFK2 248 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 A6NJR5 290 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 NKRFO15226 690 aaKnown RBP eCLIP9.28□□□□□ -0.92
NXF1-212ENST00000531872 KPNA6O60684 536 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 RAB11FIP3O75154 756 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 GJB5O95377 273 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 CXCL10P02778 98 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 KCNA5P22460 613 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 SLC1A4P43007 532 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 ALDH5A1P51649 535 aaPredicted RBP9.28□□□□□ -0.92
NXF1-212ENST00000531872 DEFB103AP81534 67 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 CSPP1Q1MSJ5 1256 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 PUS10Q3MIT2 529 aaKnown RBP9.28□□□□□ -0.92
NXF1-212ENST00000531872 FAM47CQ5HY64 1035 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 PTCRAQ6ISU1 281 aaPredicted RBP9.28□□□□□ -0.92
NXF1-212ENST00000531872 TMCO2Q7Z6W1 182 aaPredicted RBP9.28□□□□□ -0.92
NXF1-212ENST00000531872 OR6J1Q8NGC5 347 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 CAGE1Q8TC20 777 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 NEK9Q8TD19 979 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 AFAP1L1Q8TED9 768 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 UIMC1Q96RL1 719 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 TGS1Q96RS0 853 aaKnown RBP9.28□□□□□ -0.92
NXF1-212ENST00000531872 CTAGE1Q96RT6 745 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 RAD9AQ99638 391 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 EPB41L4AQ9HCS5 686 aaPredicted RBP9.28□□□□□ -0.92
NXF1-212ENST00000531872 ADD3Q9UEY8 706 aaKnown RBP9.28□□□□□ -0.92
NXF1-212ENST00000531872 ZNF318Q5VUA4 2279 aa9.28□□□□□ -0.92
NXF1-212ENST00000531872 TRIP12Q14669 1992 aaPredicted RBP9.27□□□□□ -0.93
NXF1-212ENST00000531872 DCXO43602 365 aa9.27□□□□□ -0.93
NXF1-212ENST00000531872 PARNO95453 639 aaKnown RBP9.27□□□□□ -0.93
NXF1-212ENST00000531872 MCCP23508 829 aa9.27□□□□□ -0.93
NXF1-212ENST00000531872 SSTR3P32745 418 aaPredicted RBP9.27□□□□□ -0.93
NXF1-212ENST00000531872 SNAP25P60880 206 aa9.27□□□□□ -0.93
NXF1-212ENST00000531872 RBL2Q08999 1139 aa9.27□□□□□ -0.93
NXF1-212ENST00000531872 BAATQ14032 418 aaPredicted RBP9.27□□□□□ -0.93
NXF1-212ENST00000531872 BRDTQ58F21 947 aaPredicted RBP9.27□□□□□ -0.93
NXF1-212ENST00000531872 CNKSR3Q6P9H4 555 aa9.27□□□□□ -0.93
NXF1-212ENST00000531872 NSMFQ6X4W1 530 aa9.27□□□□□ -0.93
NXF1-212ENST00000531872 SIRT2Q8IXJ6 389 aa9.27□□□□□ -0.93
NXF1-212ENST00000531872 PPP1R13LQ8WUF5 828 aa9.27□□□□□ -0.93
NXF1-212ENST00000531872 OSBP2Q969R2 916 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms