RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 DDRGK1Q96HY6 314 aa10.7□□□□□ -0.7
USF1-210ENST00000531842 CYP39A1Q9NYL5 469 aa10.7□□□□□ -0.7
USF1-210ENST00000531842 FBXO40Q9UH90 709 aa10.7□□□□□ -0.7
USF1-210ENST00000531842 GTPBP6O43824 516 aaPredicted RBP10.69□□□□□ -0.7
USF1-210ENST00000531842 SLC16A2P36021 539 aa10.69□□□□□ -0.7
USF1-210ENST00000531842 DEFB103AP81534 67 aa10.69□□□□□ -0.7
USF1-210ENST00000531842 PURAQ00577 322 aaKnown RBP10.69□□□□□ -0.7
USF1-210ENST00000531842 NBPF20Q3BBV1 942 aa10.69□□□□□ -0.7
USF1-210ENST00000531842 HSP90AB4PQ58FF6 505 aa10.69□□□□□ -0.7
USF1-210ENST00000531842 TTBK2Q6IQ55 1244 aa10.69□□□□□ -0.7
USF1-210ENST00000531842 HLA-CQ95604 372 aa10.69□□□□□ -0.7
USF1-210ENST00000531842 MKL1Q969V6 931 aa10.69□□□□□ -0.7
USF1-210ENST00000531842 FTOQ9C0B1 505 aaKnown RBP eCLIP10.69□□□□□ -0.7
USF1-210ENST00000531842 HCN4Q9Y3Q4 1203 aa10.69□□□□□ -0.7
USF1-210ENST00000531842 ASB14A6NK59 587 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 NFIBO00712 420 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 GPAA1O43292 621 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 CABYRO75952 493 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 APPP05067 770 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 TDO2P48775 406 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 GPNMBQ14956 572 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 AAK1Q2M2I8 961 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 FAM117BQ6P1L5 589 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 SLC30A10Q6XR72 485 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 HERC6Q8IVU3 1022 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 ZNF444Q8N0Y2 327 aaPredicted RBP10.68□□□□□ -0.7
USF1-210ENST00000531842 GMCL1P1Q8NEA9 526 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 PRR12Q9ULL5 1215 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 KIAA1217Q5T5P2 1943 aa10.68□□□□□ -0.7
USF1-210ENST00000531842 TTLL1O95922 423 aa10.67□□□□□ -0.7
USF1-210ENST00000531842 IQCF3P0C7M6 154 aa10.67□□□□□ -0.7
USF1-210ENST00000531842 POU3F3P20264 500 aaPredicted RBP10.67□□□□□ -0.7
USF1-210ENST00000531842 STAT2P52630 851 aa10.67□□□□□ -0.7
USF1-210ENST00000531842 OAZ1P54368 228 aa10.67□□□□□ -0.7
USF1-210ENST00000531842 TFAP4Q01664 338 aa10.67□□□□□ -0.7
USF1-210ENST00000531842 CTDSPL2Q05D32 466 aa10.67□□□□□ -0.7
USF1-210ENST00000531842 BAATQ14032 418 aaPredicted RBP10.67□□□□□ -0.7
USF1-210ENST00000531842 IQSEC1Q6DN90 963 aa10.67□□□□□ -0.7
USF1-210ENST00000531842 OR6J1Q8NGC5 347 aa10.67□□□□□ -0.7
USF1-210ENST00000531842 CTAGE1Q96RT6 745 aa10.67□□□□□ -0.7
USF1-210ENST00000531842 WDR11Q9BZH6 1224 aa10.67□□□□□ -0.7
USF1-210ENST00000531842 CCPG1Q9ULG6 757 aa10.67□□□□□ -0.7
USF1-210ENST00000531842 NLRC5Q86WI3 1866 aa10.67□□□□□ -0.7
USF1-210ENST00000531842 MYH6P13533 1939 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 ZEB2O60315 1214 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 GPR37L1O60883 481 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 ARIH2O95376 493 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 TSPY3P0CV98 308 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 TSPY8P0CW00 308 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 IL9P15248 144 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 SLC1A4P43007 532 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 ALDH5A1P51649 535 aaPredicted RBP10.66□□□□□ -0.7
USF1-210ENST00000531842 DUSP28Q4G0W2 176 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 IFNL3Q8IZI9 196 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 NEDD1Q8NHV4 660 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 STAG1Q8WVM7 1258 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 UIMC1Q96RL1 719 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 IL17RBQ9NRM6 502 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 ZBTB40Q9NUA8 1239 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 COG5Q9UP83 839 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 MICAL3Q7RTP6 2002 aa10.66□□□□□ -0.7
USF1-210ENST00000531842 PLIN4Q96Q06 1357 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 ZNF318Q5VUA4 2279 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 FRMPD2Q68DX3 1309 aaPredicted RBP10.65□□□□□ -0.7
USF1-210ENST00000531842 PTPDC1A2A3K4 754 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 FOXP2O15409 715 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 RNF113AO15541 343 aaKnown RBP10.65□□□□□ -0.7
USF1-210ENST00000531842 RAB11FIP3O75154 756 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 CALML3P27482 149 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 WDR5P61964 334 aaKnown RBP10.65□□□□□ -0.7
USF1-210ENST00000531842 RPAP2Q8IXW5 612 aaPredicted RBP10.65□□□□□ -0.7
USF1-210ENST00000531842 KBTBD3Q8NAB2 608 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 MORC4Q8TE76 937 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 DHX38Q92620 1227 aaKnown RBP10.65□□□□□ -0.7
USF1-210ENST00000531842 APPBP2Q92624 585 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 SLC9A7Q96T83 725 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 MTG1Q9BT17 334 aaPredicted RBP10.65□□□□□ -0.7
USF1-210ENST00000531842 SUGCTQ9HAC7 445 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 VTA1Q9NP79 307 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 STX8Q9UNK0 236 aa10.65□□□□□ -0.7
USF1-210ENST00000531842 DOCK5Q9H7D0 1870 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 PI4K2BG5E9Z4 385 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 ACTN1P12814 892 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 KCNA5P22460 613 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 PPARAQ07869 468 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 CCDC96Q2M329 555 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 C20orf194Q5TEA3 1177 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 RCSD1Q6JBY9 416 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 GDF6Q6KF10 455 aaPredicted RBP10.64□□□□□ -0.71
USF1-210ENST00000531842 ZSCAN25Q6NSZ9 544 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 FAM160B2Q86V87 743 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.64□□□□□ -0.71
USF1-210ENST00000531842 OTUD7AQ8TE49 926 aaPredicted RBP10.64□□□□□ -0.71
USF1-210ENST00000531842 CHURC1Q8WUH1 139 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 WNT8BQ93098 351 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 GMCL1Q96IK5 515 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 UBE2ZQ9H832 354 aaPredicted RBP10.64□□□□□ -0.71
USF1-210ENST00000531842 GPCPD1Q9NPB8 672 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 POLR3EQ9NVU0 708 aa10.64□□□□□ -0.71
USF1-210ENST00000531842 Q9Y3F1 56 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms