RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 USP48Q86UV5 1035 aa6.6□□□□□ -1.35
USP47-211ENST00000531513 ZNF654Q8IZM8 581 aa6.6□□□□□ -1.35
USP47-211ENST00000531513 FIBCD1Q8N539 461 aa6.6□□□□□ -1.35
USP47-211ENST00000531513 FNIP1Q8TF40 1166 aa6.6□□□□□ -1.35
USP47-211ENST00000531513 SMARCC1Q92922 1105 aaPredicted RBP6.6□□□□□ -1.35
USP47-211ENST00000531513 FHOD1Q9Y613 1164 aa6.6□□□□□ -1.35
USP47-211ENST00000531513 PMF1-BGLAPU3KQ54 211 aa6.6□□□□□ -1.35
USP47-211ENST00000531513 IFNGR1P15260 489 aa6.59□□□□□ -1.35
USP47-211ENST00000531513 MC3RP41968 323 aa6.59□□□□□ -1.35
USP47-211ENST00000531513 CORO7P57737 925 aa6.59□□□□□ -1.35
USP47-211ENST00000531513 HTRA3P83110 453 aa6.59□□□□□ -1.35
USP47-211ENST00000531513 PRR5P85299 388 aa6.59□□□□□ -1.35
USP47-211ENST00000531513 NOL9Q5SY16 702 aaKnown RBP6.59□□□□□ -1.35
USP47-211ENST00000531513 TAB3Q8N5C8 712 aaPredicted RBP6.59□□□□□ -1.35
USP47-211ENST00000531513 ARMC5Q96C12 935 aa6.59□□□□□ -1.35
USP47-211ENST00000531513 PTCHD1Q96NR3 888 aa6.59□□□□□ -1.35
USP47-211ENST00000531513 FCRL3Q96P31 734 aaPredicted RBP6.59□□□□□ -1.35
USP47-211ENST00000531513 SPATA25Q9BR10 227 aa6.59□□□□□ -1.35
USP47-211ENST00000531513 FAM86C1Q9NVL1 165 aa6.59□□□□□ -1.35
USP47-211ENST00000531513 PCDHGB7Q9Y5F8 929 aa6.59□□□□□ -1.35
USP47-211ENST00000531513 F8W031 263 aaPredicted RBP6.58□□□□□ -1.36
USP47-211ENST00000531513 TP53P04637 393 aaPredicted RBP6.58□□□□□ -1.36
USP47-211ENST00000531513 CD3EP07766 207 aa6.58□□□□□ -1.36
USP47-211ENST00000531513 RACK1P63244 317 aaKnown RBP6.58□□□□□ -1.36
USP47-211ENST00000531513 ZYXQ15942 572 aaKnown RBP6.58□□□□□ -1.36
USP47-211ENST00000531513 ANKRD39Q53RE8 183 aa6.58□□□□□ -1.36
USP47-211ENST00000531513 NT5DC1Q5TFE4 455 aa6.58□□□□□ -1.36
USP47-211ENST00000531513 SAPCD2Q86UD0 394 aa6.58□□□□□ -1.36
USP47-211ENST00000531513 DNAJC2Q99543 621 aaKnown RBP6.58□□□□□ -1.36
USP47-211ENST00000531513 RNF38Q9H0F5 515 aa6.58□□□□□ -1.36
USP47-211ENST00000531513 USP40Q9NVE5 1235 aa6.58□□□□□ -1.36
USP47-211ENST00000531513 INPP5FQ9Y2H2 1132 aa6.58□□□□□ -1.36
USP47-211ENST00000531513 FAN1Q9Y2M0 1017 aa6.58□□□□□ -1.36
USP47-211ENST00000531513 ASGR2P07307 311 aa6.57□□□□□ -1.36
USP47-211ENST00000531513 IMPDH2P12268 514 aa6.57□□□□□ -1.36
USP47-211ENST00000531513 CD247P20963 164 aa6.57□□□□□ -1.36
USP47-211ENST00000531513 GTF2F1P35269 517 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP47-211ENST00000531513 NOP2P46087 812 aaKnown RBP6.57□□□□□ -1.36
USP47-211ENST00000531513 ARID5AQ03989 594 aa6.57□□□□□ -1.36
USP47-211ENST00000531513 DLX2Q07687 328 aaPredicted RBP6.57□□□□□ -1.36
USP47-211ENST00000531513 ZFYVE27Q5T4F4 411 aa6.57□□□□□ -1.36
USP47-211ENST00000531513 ZNF526Q8TF50 670 aaPredicted RBP6.57□□□□□ -1.36
USP47-211ENST00000531513 ZDHHC15Q96MV8 337 aa6.57□□□□□ -1.36
USP47-211ENST00000531513 FERD3LQ96RJ6 166 aa6.57□□□□□ -1.36
USP47-211ENST00000531513 TM9SF2Q99805 663 aa6.57□□□□□ -1.36
USP47-211ENST00000531513 LNPKQ9C0E8 428 aa6.57□□□□□ -1.36
USP47-211ENST00000531513 NOL6Q9H6R4 1146 aaKnown RBP6.57□□□□□ -1.36
USP47-211ENST00000531513 DBR1Q9UK59 544 aaKnown RBP6.57□□□□□ -1.36
USP47-211ENST00000531513 ZNF451Q9Y4E5 1061 aa6.57□□□□□ -1.36
USP47-211ENST00000531513 SH3D21A4FU49 640 aa6.56□□□□□ -1.36
USP47-211ENST00000531513 DNAJA1P31689 397 aaKnown RBP6.56□□□□□ -1.36
USP47-211ENST00000531513 RBL2Q08999 1139 aa6.56□□□□□ -1.36
USP47-211ENST00000531513 UBXN11Q5T124 520 aa6.56□□□□□ -1.36
USP47-211ENST00000531513 GIMAP6Q6P9H5 292 aa6.56□□□□□ -1.36
USP47-211ENST00000531513 NOP9Q86U38 636 aaKnown RBP6.56□□□□□ -1.36
USP47-211ENST00000531513 FERMT3Q86UX7 667 aa6.56□□□□□ -1.36
USP47-211ENST00000531513 RXFP1Q9HBX9 757 aa6.56□□□□□ -1.36
USP47-211ENST00000531513 SF3B6Q9Y3B4 125 aaKnown RBP6.56□□□□□ -1.36
USP47-211ENST00000531513 K7ESM1 405 aa6.55□□□□□ -1.36
USP47-211ENST00000531513 TBC1D8O95759 1140 aa6.55□□□□□ -1.36
USP47-211ENST00000531513 GLI4P10075 376 aa6.55□□□□□ -1.36
USP47-211ENST00000531513 NCAM1P13591 858 aa6.55□□□□□ -1.36
USP47-211ENST00000531513 ITGA4P13612 1032 aa6.55□□□□□ -1.36
USP47-211ENST00000531513 CDK11BP21127 795 aaKnown RBP6.55□□□□□ -1.36
USP47-211ENST00000531513 L1CAMP32004 1257 aa6.55□□□□□ -1.36
USP47-211ENST00000531513 ZXDCQ2QGD7 858 aaPredicted RBP6.55□□□□□ -1.36
USP47-211ENST00000531513 HHIPL2Q6UWX4 724 aa6.55□□□□□ -1.36
USP47-211ENST00000531513 UNC5AQ6ZN44 842 aa6.55□□□□□ -1.36
USP47-211ENST00000531513 RUFY4Q6ZNE9 571 aa6.55□□□□□ -1.36
USP47-211ENST00000531513 VPS37DQ86XT2 251 aa6.55□□□□□ -1.36
USP47-211ENST00000531513 ALG3Q92685 438 aa6.55□□□□□ -1.36
USP47-211ENST00000531513 BCAS3Q9H6U6 928 aa6.55□□□□□ -1.36
USP47-211ENST00000531513 CDK11AQ9UQ88 783 aaPredicted RBP6.55□□□□□ -1.36
USP47-211ENST00000531513 GUCY2CP25092 1073 aa6.54□□□□□ -1.36
USP47-211ENST00000531513 PMLP29590 882 aa6.54□□□□□ -1.36
USP47-211ENST00000531513 POU4F1Q01851 419 aa6.54□□□□□ -1.36
USP47-211ENST00000531513 FBXW10Q5XX13 1052 aa6.54□□□□□ -1.36
USP47-211ENST00000531513 B3GNT8Q7Z7M8 397 aa6.54□□□□□ -1.36
USP47-211ENST00000531513 RBBP8NLQ8NC74 664 aaPredicted RBP6.54□□□□□ -1.36
USP47-211ENST00000531513 NLGN2Q8NFZ4 835 aa6.54□□□□□ -1.36
USP47-211ENST00000531513 FBLN5Q9UBX5 448 aa6.54□□□□□ -1.36
USP47-211ENST00000531513 PPT2Q9UMR5 302 aa6.54□□□□□ -1.36
USP47-211ENST00000531513 CBFA2T2O43439 604 aa6.53□□□□□ -1.36
USP47-211ENST00000531513 INSRRP14616 1297 aa6.53□□□□□ -1.36
USP47-211ENST00000531513 PPP2R5DQ14738 602 aa6.53□□□□□ -1.36
USP47-211ENST00000531513 CCDC144BQ3MJ40 725 aa6.53□□□□□ -1.36
USP47-211ENST00000531513 SOGA3Q5TF21 947 aa6.53□□□□□ -1.36
USP47-211ENST00000531513 RCSD1Q6JBY9 416 aa6.53□□□□□ -1.36
USP47-211ENST00000531513 CARFQ8N187 725 aa6.53□□□□□ -1.36
USP47-211ENST00000531513 TMPRSS5Q9H3S3 457 aa6.53□□□□□ -1.36
USP47-211ENST00000531513 CNOT11Q9UKZ1 510 aaKnown RBP6.53□□□□□ -1.36
USP47-211ENST00000531513 ZNF214Q9UL59 606 aaPredicted RBP6.53□□□□□ -1.36
USP47-211ENST00000531513 DUSP10Q9Y6W6 482 aa6.53□□□□□ -1.36
USP47-211ENST00000531513 CNR2P34972 360 aa6.52□□□□□ -1.37
USP47-211ENST00000531513 PUM1Q14671 1186 aaKnown RBP eCLIP6.52□□□□□ -1.37
USP47-211ENST00000531513 CABP7Q86V35 215 aa6.52□□□□□ -1.37
USP47-211ENST00000531513 TSPAN17Q96FV3 270 aa6.52□□□□□ -1.37
USP47-211ENST00000531513 MCMBPQ9BTE3 642 aa6.52□□□□□ -1.37
USP47-211ENST00000531513 HIRIP3Q9BW71 556 aaPredicted RBP6.52□□□□□ -1.37
USP47-211ENST00000531513 RWDD3Q9Y3V2 267 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms