RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 RHPN1Q8TCX5 695 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 ZNF384Q8TF68 577 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 SCG3Q8WXD2 468 aaKnown RBP8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 GUCD1Q96NT3 240 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 GPR108Q9NPR9 543 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 ABCF2Q9UG63 623 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 DBNLQ9UJU6 430 aaKnown RBP8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 HCN4Q9Y3Q4 1203 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 ARAP2Q8WZ64 1704 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 PRUNE2Q8WUY3 3088 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 DDTLA6NHG4 134 aaPredicted RBP8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 C2CD2LO14523 706 aa8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 LDHBP07195 334 aaKnown RBP8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 ARID4AP29374 1257 aaPredicted RBP8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 TNP2Q05952 138 aa8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 SPATA5Q8NB90 893 aa8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 COA7Q96BR5 231 aa8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 CRBNQ96SW2 442 aa8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 C11orf49Q9H6J7 331 aa8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 GJD2Q9UKL4 321 aa8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 SUGT1Q9Y2Z0 365 aa8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 PFASO15067 1338 aa8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 CDH23Q9H251 3354 aa8.53□□□□□ -1.04
TRIM53CP-201ENST00000531490 DCDC2BA2VCK2 349 aa8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 SMARCA5O60264 1052 aaPredicted RBP8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 HMGCRP04035 888 aa8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 CYP2E1P05181 493 aaPredicted RBP8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 MAP2K3P46734 347 aa8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 C1orf53Q5VUE5 145 aa8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 ZSCAN29Q8IWY8 852 aaPredicted RBP8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 STAG2Q8N3U4 1231 aa8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 C2orf49Q9BVC5 232 aaPredicted RBP8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 PHACTR1Q9C0D0 580 aa8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 DDX4Q9NQI0 724 aaKnown RBP8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 MAST3O60307 1309 aa8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 SALL1Q9NSC2 1324 aa8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 MUC3AQ02505 3323 aa8.52□□□□□ -1.05
TRIM53CP-201ENST00000531490 MAPTP10636 758 aaKnown RBP8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 CYP2B6P20813 491 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 ZAP70P43403 619 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 MAP3K10Q02779 954 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 MECOMQ03112 1051 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 PICALMQ13492 652 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 RRP1BQ14684 758 aaKnown RBP8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 LRRC26Q2I0M4 334 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 CCDC158Q5M9N0 1113 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 TTC39AQ5SRH9 613 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 SAMD5Q5TGI4 173 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 LRRC69Q6ZNQ3 347 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 AACSQ86V21 672 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 RPTORQ8N122 1335 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 FAM200AQ8TCP9 573 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 TRIB2Q92519 343 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 CHMP4BQ9H444 224 aaKnown RBP8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 ANTXR1Q9H6X2 564 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 OGDHLQ9ULD0 1010 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 AGTPBP1Q9UPW5 1226 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 SLC45A1Q9Y2W3 748 aa8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 SUPT16HQ9Y5B9 1047 aaKnown RBP8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 GPC6Q9Y625 555 aaPredicted RBP8.51□□□□□ -1.05
TRIM53CP-201ENST00000531490 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 KHNYNO15037 678 aaKnown RBP8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 CTNND1O60716 968 aaKnown RBP8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 HMMRO75330 724 aa8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 UQCRFS1P1P0C7P4 283 aa8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 FAM157BP0CG42 384 aa8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 BMP4P12644 408 aa8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 SPP2Q13103 211 aa8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 FAM110CQ1W6H9 321 aa8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 ERICH6Q7L0X2 663 aa8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 ERC1Q8IUD2 1116 aa8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 NSUN4Q96CB9 384 aaKnown RBP8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 OXCT2Q9BYC2 517 aaPredicted RBP8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 DCTPP1Q9H773 170 aa8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 PIH1D3Q9NQM4 214 aaKnown RBP8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 NOVA2Q9UNW9 492 aaKnown RBP8.5□□□□□ -1.05
TRIM53CP-201ENST00000531490 PDS5AQ29RF7 1337 aaKnown RBP8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 RAB11FIP3O75154 756 aa8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 COL6A1P12109 1028 aa8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 CCND3P30281 292 aaPredicted RBP8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 HMGCS2P54868 508 aa8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 CCL14Q16627 93 aa8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 HSP90AB4PQ58FF6 505 aa8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 ADGRA1Q86SQ6 560 aa8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 DZIP1Q86YF9 867 aaKnown RBP8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 CLASRPQ8N2M8 674 aaKnown RBP8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 KIF1BPQ96EK5 621 aa8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 ZNF512BQ96KM6 892 aaPredicted RBP8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 IDI2Q9BXS1 227 aa8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 ASCC2Q9H1I8 757 aaPredicted RBP8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 RAI14Q9P0K7 980 aa8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 LRP2BPQ9P2M1 347 aa8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 RFX7Q2KHR2 1363 aa8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 GAKO14976 1311 aa8.49□□□□□ -1.05
TRIM53CP-201ENST00000531490 GPR75-ASB3A0A0A6YYF3 556 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 ENTPD3O75355 529 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 CD33P20138 364 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 IGFBP4P22692 258 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 BTDP43251 543 aa8.48□□□□□ -1.05
TRIM53CP-201ENST00000531490 RHBDL3P58872 404 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms