RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 SMARCA1P28370 1054 aa18.85■□□□□ 0.61
RELA-216ENST00000531238 LRRC41Q15345 812 aa18.85■□□□□ 0.61
RELA-216ENST00000531238 APOA5Q6Q788 366 aa18.85■□□□□ 0.61
RELA-216ENST00000531238 Q6ZUG5 572 aa18.85■□□□□ 0.61
RELA-216ENST00000531238 EEPD1Q7L9B9 569 aa18.85■□□□□ 0.61
RELA-216ENST00000531238 CTCFLQ8NI51 663 aaPredicted RBP18.85■□□□□ 0.61
RELA-216ENST00000531238 SPZ1Q9BXG8 430 aa18.85■□□□□ 0.61
RELA-216ENST00000531238 FAM217BQ9NTX9 383 aaPredicted RBP18.85■□□□□ 0.61
RELA-216ENST00000531238 FAM184BQ9ULE4 1060 aa18.85■□□□□ 0.61
RELA-216ENST00000531238 AKR1A1P14550 325 aa18.84■□□□□ 0.61
RELA-216ENST00000531238 RPS6KB1P23443 525 aa18.84■□□□□ 0.61
RELA-216ENST00000531238 KIF5BP33176 963 aa18.84■□□□□ 0.61
RELA-216ENST00000531238 CCDC82Q8N4S0 544 aa18.84■□□□□ 0.61
RELA-216ENST00000531238 DPF3Q92784 378 aa18.84■□□□□ 0.61
RELA-216ENST00000531238 MCM3APO60318 1980 aa18.84■□□□□ 0.61
RELA-216ENST00000531238 hCG_1642624A0A1W2PR95 340 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 DNM1LO00429 736 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 ADAMTS4O75173 837 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 CALM1P0DP23 149 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 CALM2P0DP24 149 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 CALM3P0DP25 149 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 RARBP10826 455 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 EDNRBP24530 442 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 ADCYAP1R1P41586 468 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 GHRHRQ02643 423 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 APOBRQ0VD83 1088 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 FUT2Q10981 343 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 BLOC1S2Q6QNY1 142 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 TMTC3Q6ZXV5 915 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 MICU3Q86XE3 530 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 FBXO16Q8IX29 292 aaPredicted RBP18.83■□□□□ 0.6
RELA-216ENST00000531238 ARRDC4Q8NCT1 418 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 LZTS2Q9BRK4 669 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 AGXT2Q9BYV1 514 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 SENP6Q9GZR1 1112 aaPredicted RBP18.83■□□□□ 0.6
RELA-216ENST00000531238 ZSWIM6Q9HCJ5 1215 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 XPNPEP3Q9NQH7 507 aa18.83■□□□□ 0.6
RELA-216ENST00000531238 FRMPD3Q5JV73 1810 aa18.82■□□□□ 0.6
RELA-216ENST00000531238 KLF18A0A0U1RQI7 1052 aa18.82■□□□□ 0.6
RELA-216ENST00000531238 MYADML2A6NDP7 307 aa18.82■□□□□ 0.6
RELA-216ENST00000531238 CFBP00751 764 aa18.82■□□□□ 0.6
RELA-216ENST00000531238 CASTP20810 708 aaKnown RBP18.82■□□□□ 0.6
RELA-216ENST00000531238 CDC27P30260 824 aa18.82■□□□□ 0.6
RELA-216ENST00000531238 GNAQP50148 359 aa18.82■□□□□ 0.6
RELA-216ENST00000531238 HSD17B4P51659 736 aa18.82■□□□□ 0.6
RELA-216ENST00000531238 CCSAPQ6IQ19 270 aaPredicted RBP18.82■□□□□ 0.6
RELA-216ENST00000531238 MCF2L2Q86YR7 1114 aa18.82■□□□□ 0.6
RELA-216ENST00000531238 FBXL16Q8N461 479 aa18.82■□□□□ 0.6
RELA-216ENST00000531238 KLHDC9Q8NEP7 349 aa18.82■□□□□ 0.6
RELA-216ENST00000531238 HTATIP2Q9BUP3 242 aa18.82■□□□□ 0.6
RELA-216ENST00000531238 MAF1Q9H063 256 aa18.82■□□□□ 0.6
RELA-216ENST00000531238 ADD3Q9UEY8 706 aaKnown RBP18.82■□□□□ 0.6
RELA-216ENST00000531238 CTAGE5O15320 804 aa18.81■□□□□ 0.6
RELA-216ENST00000531238 ZBTB43O43298 467 aa18.81■□□□□ 0.6
RELA-216ENST00000531238 DUSP11O75319 330 aaKnown RBP18.81■□□□□ 0.6
RELA-216ENST00000531238 MYCNP04198 464 aaPredicted RBP18.81■□□□□ 0.6
RELA-216ENST00000531238 SMPD1P17405 629 aa18.81■□□□□ 0.6
RELA-216ENST00000531238 LRRC26Q2I0M4 334 aa18.81■□□□□ 0.6
RELA-216ENST00000531238 RUFY3Q7L099 469 aa18.81■□□□□ 0.6
RELA-216ENST00000531238 DNERQ8NFT8 737 aa18.81■□□□□ 0.6
RELA-216ENST00000531238 BRF1Q92994 677 aa18.81■□□□□ 0.6
RELA-216ENST00000531238 GNEQ9Y223 722 aaKnown RBP18.81■□□□□ 0.6
RELA-216ENST00000531238 SYNRGQ9UMZ2 1314 aa18.8■□□□□ 0.6
RELA-216ENST00000531238 H0YGN5 161 aa18.8■□□□□ 0.6
RELA-216ENST00000531238 PSMA5P28066 241 aa18.8■□□□□ 0.6
RELA-216ENST00000531238 HOXA13P31271 388 aaPredicted RBP18.8■□□□□ 0.6
RELA-216ENST00000531238 ADD1P35611 737 aaKnown RBP18.8■□□□□ 0.6
RELA-216ENST00000531238 TNFAIP2Q03169 654 aa18.8■□□□□ 0.6
RELA-216ENST00000531238 SYNE3Q6ZMZ3 975 aa18.8■□□□□ 0.6
RELA-216ENST00000531238 FERMT2Q96AC1 680 aa18.8■□□□□ 0.6
RELA-216ENST00000531238 RRP36Q96EU6 259 aaKnown RBP18.8■□□□□ 0.6
RELA-216ENST00000531238 VTA1Q9NP79 307 aa18.8■□□□□ 0.6
RELA-216ENST00000531238 PCDH10Q9P2E7 1040 aa18.8■□□□□ 0.6
RELA-216ENST00000531238 LOC102724159A0A0B4J2E5 919 aa18.79■□□□□ 0.6
RELA-216ENST00000531238 RBM47A0AV96 593 aaKnown RBP18.79■□□□□ 0.6
RELA-216ENST00000531238 GJA9P57773 515 aa18.79■□□□□ 0.6
RELA-216ENST00000531238 TOB2Q14106 344 aaPredicted RBP18.79■□□□□ 0.6
RELA-216ENST00000531238 PWP2Q15269 919 aaKnown RBP18.79■□□□□ 0.6
RELA-216ENST00000531238 RTN1Q16799 776 aa18.79■□□□□ 0.6
RELA-216ENST00000531238 PRPF38BQ5VTL8 546 aaKnown RBP18.79■□□□□ 0.6
RELA-216ENST00000531238 IQSEC1Q6DN90 963 aa18.79■□□□□ 0.6
RELA-216ENST00000531238 RMDN3Q96TC7 470 aa18.79■□□□□ 0.6
RELA-216ENST00000531238 TM6SF1Q9BZW5 370 aa18.79■□□□□ 0.6
RELA-216ENST00000531238 UPF3AQ9H1J1 476 aaKnown RBP18.79■□□□□ 0.6
RELA-216ENST00000531238 RANBP2P49792 3224 aaKnown RBP18.78■□□□□ 0.6
RELA-216ENST00000531238 ATN1P54259 1190 aaPredicted RBP18.78■□□□□ 0.6
RELA-216ENST00000531238 NKX3-2P78367 333 aa18.78■□□□□ 0.6
RELA-216ENST00000531238 KCNA10Q16322 511 aa18.78■□□□□ 0.6
RELA-216ENST00000531238 RNF180Q86T96 592 aa18.78■□□□□ 0.6
RELA-216ENST00000531238 NSUN6Q8TEA1 469 aaKnown RBP18.78■□□□□ 0.6
RELA-216ENST00000531238 LARP6Q9BRS8 491 aaKnown RBP18.78■□□□□ 0.6
RELA-216ENST00000531238 UPF3BQ9BZI7 483 aaKnown RBP18.78■□□□□ 0.6
RELA-216ENST00000531238 PXMP2Q9NR77 195 aa18.78■□□□□ 0.6
RELA-216ENST00000531238 PHF24Q9UPV7 400 aa18.78■□□□□ 0.6
RELA-216ENST00000531238 MYH6P13533 1939 aa18.78■□□□□ 0.6
RELA-216ENST00000531238 CNTNAP5Q8WYK1 1306 aa18.77■□□□□ 0.6
RELA-216ENST00000531238 ALPK3Q96L96 1907 aa18.77■□□□□ 0.6
RELA-216ENST00000531238 GOLGA8AA7E2F4 631 aa18.77■□□□□ 0.6
RELA-216ENST00000531238 GOLGA8BA8MQT2 603 aa18.77■□□□□ 0.6
RELA-216ENST00000531238 KBTBD13C9JR72 458 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms