RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 PLEKHG1Q9ULL1 1385 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 AFF2P51816 1311 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 USP6P35125 1406 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 RCCD1A6NED2 376 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 HIP1O00291 1037 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 TAF5LO75529 589 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 IDEP14735 1019 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 MATR3P43243 847 aaKnown RBP eCLIP8.58□□□□□ -1.042e-6■■■■□ 19.6
PTPRK-219ENST00000531050 PLCD1P51178 756 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 GUCY2FP51841 1108 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 USP46P62068 366 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 PPP2R2AP63151 447 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 PLOD1Q02809 727 aaPredicted RBP8.58□□□□□ -1.04
PTPRK-219ENST00000531050 KIF5AQ12840 1032 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 ITIH4Q14624 930 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 NT5DC1Q5TFE4 455 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 CDKAL1Q5VV42 579 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 ZNF662Q6ZS27 426 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 SESTD1Q86VW0 696 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 FNBP4Q8N3X1 1017 aaPredicted RBP8.58□□□□□ -1.04
PTPRK-219ENST00000531050 ZBTB8BQ8NAP8 495 aaPredicted RBP8.58□□□□□ -1.04
PTPRK-219ENST00000531050 JADE2Q9NQC1 790 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 SMARCAL1Q9NZC9 954 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 NKX1-2Q9UD57 310 aaPredicted RBP8.58□□□□□ -1.04
PTPRK-219ENST00000531050 TSKSQ9UJT2 592 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 SNX12Q9UMY4 172 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 XRN1Q8IZH2 1706 aaKnown RBP8.58□□□□□ -1.04
PTPRK-219ENST00000531050 H0YGN5 161 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 FLOT1O75955 427 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 BAG3O95817 575 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 GLI1P08151 1106 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 GSTT1P30711 240 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 SARSP49591 514 aaKnown RBP8.57□□□□□ -1.04
PTPRK-219ENST00000531050 EIF4A2Q14240 407 aaKnown RBP8.57□□□□□ -1.04
PTPRK-219ENST00000531050 MYBPC2Q14324 1141 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 CHADLQ6NUI6 762 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 MCM10Q7L590 875 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 PIGWQ7Z7B1 504 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 TMEM110Q86TL2 294 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 USHBP1Q8N6Y0 703 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 NCSTNQ92542 709 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 CHMP6Q96FZ7 201 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 FAM81BQ96LP2 452 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 LACRTQ9GZZ8 138 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 BRD8Q9H0E9 1235 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 ATP8A2Q9NTI2 1148 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 ABCF3Q9NUQ8 709 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 TBC1D7Q9P0N9 293 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 DACH1Q9UI36 760 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 NFS1Q9Y697 457 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 COL15A1P39059 1388 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 PTPRUQ92729 1446 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 ZSCAN5CA6NGD5 496 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-219ENST00000531050 USO1O60763 962 aaKnown RBP8.57□□□□□ -1.04
PTPRK-219ENST00000531050 WFS1O76024 890 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 TMCC1O94876 653 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 MSH2P43246 934 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 FLIIQ13045 1269 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 TMED1Q13445 227 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 TMEM132AQ24JP5 1023 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 LRIG3Q6UXM1 1119 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 BICDL1Q6ZP65 573 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 TRPM8Q7Z2W7 1104 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 LONP2Q86WA8 852 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 IFT20Q8IY31 132 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 RNF168Q8IYW5 571 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-219ENST00000531050 KIF2BQ8N4N8 673 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 GBP7Q8N8V2 638 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-219ENST00000531050 FAM136AQ96C01 138 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 NLRP3Q96P20 1036 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 ZNF317Q96PQ6 595 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-219ENST00000531050 PURBQ96QR8 312 aaKnown RBP8.57□□□□□ -1.04
PTPRK-219ENST00000531050 PLCB1Q9NQ66 1216 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 ACEP12821 1306 aa8.57□□□□□ -1.04
PTPRK-219ENST00000531050 ESYT3A0FGR9 886 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 GCOM1H8Y6P7 765 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-219ENST00000531050 UBOX5O94941 541 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 MYZAPP0CAP1 466 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 CCDC166P0CW27 439 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 ACADSP16219 412 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 ERCC5P28715 1186 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-219ENST00000531050 KRT9P35527 623 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 HSPA9P38646 679 aaKnown RBP8.56□□□□□ -1.04
PTPRK-219ENST00000531050 PHEXP78562 749 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 PRPF4BQ13523 1007 aaKnown RBP8.56□□□□□ -1.04
PTPRK-219ENST00000531050 PLS1Q14651 629 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 CCDC129Q6ZRS4 1044 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 STOX1Q6ZVD7 989 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 CCDC80Q76M96 950 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 SDR16C5Q8N3Y7 309 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 NOC3LQ8WTT2 800 aaKnown RBP8.56□□□□□ -1.04
PTPRK-219ENST00000531050 UCMAQ8WVF2 138 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 ECT2Q9H8V3 914 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 SEC31BQ9NQW1 1179 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 ARHGEF3Q9NR81 526 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 EHD2Q9NZN4 543 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 KCNH3Q9ULD8 1083 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 BARX2Q9UMQ3 279 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-219ENST00000531050 BCL9O00512 1426 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 RIMS1Q86UR5 1692 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms