RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 PTPDC1A2A3K4 754 aa21.4■■□□□ 1.02
PSMC3-208ENST00000530887 HSPD1P10809 573 aaKnown RBP21.4■■□□□ 1.02
PSMC3-208ENST00000530887 PDHBP11177 359 aa21.4■■□□□ 1.02
PSMC3-208ENST00000530887 CYP2C18P33260 490 aa21.4■■□□□ 1.02
PSMC3-208ENST00000530887 IRX5P78411 483 aaPredicted RBP21.4■■□□□ 1.02
PSMC3-208ENST00000530887 TJAP1Q5JTD0 557 aa21.4■■□□□ 1.02
PSMC3-208ENST00000530887 RRP12Q5JTH9 1297 aaKnown RBP21.4■■□□□ 1.02
PSMC3-208ENST00000530887 VPS53Q5VIR6 699 aa21.4■■□□□ 1.02
PSMC3-208ENST00000530887 RNF207Q6ZRF8 634 aa21.4■■□□□ 1.02
PSMC3-208ENST00000530887 RGS22Q8NE09 1264 aa21.4■■□□□ 1.02
PSMC3-208ENST00000530887 ESR2Q92731 530 aa21.4■■□□□ 1.02
PSMC3-208ENST00000530887 NOC4LQ9BVI4 516 aaKnown RBP21.4■■□□□ 1.02
PSMC3-208ENST00000530887 CCDC171Q6TFL3 1326 aa21.39■■□□□ 1.01
PSMC3-208ENST00000530887 RFC2P35250 354 aa21.39■■□□□ 1.01
PSMC3-208ENST00000530887 PTPN11Q06124 597 aaPredicted RBP21.39■■□□□ 1.01
PSMC3-208ENST00000530887 PDE4DQ08499 809 aa21.39■■□□□ 1.01
PSMC3-208ENST00000530887 EEPD1Q7L9B9 569 aa21.39■■□□□ 1.01
PSMC3-208ENST00000530887 DGKHQ86XP1 1220 aa21.39■■□□□ 1.01
PSMC3-208ENST00000530887 SCFD2Q8WU76 684 aa21.39■■□□□ 1.01
PSMC3-208ENST00000530887 MTG1Q9BT17 334 aaPredicted RBP21.39■■□□□ 1.01
PSMC3-208ENST00000530887 ALDH8A1Q9H2A2 487 aaPredicted RBP21.39■■□□□ 1.01
PSMC3-208ENST00000530887 SLC28A3Q9HAS3 691 aa21.39■■□□□ 1.01
PSMC3-208ENST00000530887 MTMR7Q9Y216 660 aa21.39■■□□□ 1.01
PSMC3-208ENST00000530887 CDH23Q9H251 3354 aa21.38■■□□□ 1.01
PSMC3-208ENST00000530887 B4GALT4O60513 344 aa21.38■■□□□ 1.01
PSMC3-208ENST00000530887 SNHG28P0DPA3 235 aa21.38■■□□□ 1.01
PSMC3-208ENST00000530887 ACRP10323 421 aa21.38■■□□□ 1.01
PSMC3-208ENST00000530887 ACTN1P12814 892 aa21.38■■□□□ 1.01
PSMC3-208ENST00000530887 ZNF543Q08ER8 600 aa21.38■■□□□ 1.01
PSMC3-208ENST00000530887 PPP2R5BQ15173 497 aa21.38■■□□□ 1.01
PSMC3-208ENST00000530887 IQCA1Q86XH1 822 aa21.38■■□□□ 1.01
PSMC3-208ENST00000530887 ATXN2LQ8WWM7 1075 aaKnown RBP21.38■■□□□ 1.01
PSMC3-208ENST00000530887 TSPYL2Q9H2G4 693 aaPredicted RBP21.38■■□□□ 1.01
PSMC3-208ENST00000530887 PDGFCQ9NRA1 345 aa21.38■■□□□ 1.01
PSMC3-208ENST00000530887 TTC28Q96AY4 2481 aa21.38■■□□□ 1.01
PSMC3-208ENST00000530887 HIP1O00291 1037 aa21.37■■□□□ 1.01
PSMC3-208ENST00000530887 SLC16A2P36021 539 aa21.37■■□□□ 1.01
PSMC3-208ENST00000530887 NFRKBQ6P4R8 1299 aa21.37■■□□□ 1.01
PSMC3-208ENST00000530887 OR6J1Q8NGC5 347 aa21.37■■□□□ 1.01
PSMC3-208ENST00000530887 SLC4A7Q9Y6M7 1214 aa21.37■■□□□ 1.01
PSMC3-208ENST00000530887 GRIN2DO15399 1336 aa21.36■■□□□ 1.01
PSMC3-208ENST00000530887 TRIM6-TRIM34B2RNG4 842 aa21.36■■□□□ 1.01
PSMC3-208ENST00000530887 NFIBO00712 420 aa21.36■■□□□ 1.01
PSMC3-208ENST00000530887 EDNRBP24530 442 aa21.36■■□□□ 1.01
PSMC3-208ENST00000530887 SNAP25P60880 206 aa21.36■■□□□ 1.01
PSMC3-208ENST00000530887 PURAQ00577 322 aaKnown RBP21.36■■□□□ 1.01
PSMC3-208ENST00000530887 TTLL4Q14679 1199 aa21.36■■□□□ 1.01
PSMC3-208ENST00000530887 TTBK2Q6IQ55 1244 aa21.36■■□□□ 1.01
PSMC3-208ENST00000530887 FAM227BQ96M60 508 aa21.36■■□□□ 1.01
PSMC3-208ENST00000530887 GPCPD1Q9NPB8 672 aa21.36■■□□□ 1.01
PSMC3-208ENST00000530887 INCENPQ9NQS7 918 aa21.36■■□□□ 1.01
PSMC3-208ENST00000530887 PCDHA11Q9Y5I1 949 aa21.36■■□□□ 1.01
PSMC3-208ENST00000530887 TNKSO95271 1327 aa21.35■■□□□ 1.01
PSMC3-208ENST00000530887 FRMPD2Q68DX3 1309 aaPredicted RBP21.35■■□□□ 1.01
PSMC3-208ENST00000530887 A0A0D9SFI3 127 aa21.35■■□□□ 1.01
PSMC3-208ENST00000530887 PITPNM1O00562 1244 aa21.35■■□□□ 1.01
PSMC3-208ENST00000530887 ZNF213O14771 459 aa21.35■■□□□ 1.01
PSMC3-208ENST00000530887 CALML3P27482 149 aa21.35■■□□□ 1.01
PSMC3-208ENST00000530887 RPS6P62753 249 aaKnown RBP21.35■■□□□ 1.01
PSMC3-208ENST00000530887 MCF2L2Q86YR7 1114 aa21.35■■□□□ 1.01
PSMC3-208ENST00000530887 CLEC4DQ8WXI8 215 aa21.35■■□□□ 1.01
PSMC3-208ENST00000530887 CHMP4CQ96CF2 233 aa21.35■■□□□ 1.01
PSMC3-208ENST00000530887 TRPV6Q9H1D0 765 aa21.35■■□□□ 1.01
PSMC3-208ENST00000530887 RWDD1Q9H446 243 aaPredicted RBP21.35■■□□□ 1.01
PSMC3-208ENST00000530887 A6NJR5 290 aa21.34■■□□□ 1.01
PSMC3-208ENST00000530887 CCL23P55773 120 aa21.34■■□□□ 1.01
PSMC3-208ENST00000530887 BFSP2Q13515 415 aa21.34■■□□□ 1.01
PSMC3-208ENST00000530887 OTOP2Q7RTS6 562 aa21.34■■□□□ 1.01
PSMC3-208ENST00000530887 CCDC155Q8N6L0 562 aa21.34■■□□□ 1.01
PSMC3-208ENST00000530887 RETREG2Q8NC44 543 aa21.34■■□□□ 1.01
PSMC3-208ENST00000530887 THEGQ9P2T0 379 aa21.34■■□□□ 1.01
PSMC3-208ENST00000530887 LCTP09848 1927 aa21.33■■□□□ 1.01
PSMC3-208ENST00000530887 ABCB11O95342 1321 aa21.33■■□□□ 1.01
PSMC3-208ENST00000530887 PARNO95453 639 aaKnown RBP21.33■■□□□ 1.01
PSMC3-208ENST00000530887 MYL3P08590 195 aa21.33■■□□□ 1.01
PSMC3-208ENST00000530887 PBX2P40425 430 aa21.33■■□□□ 1.01
PSMC3-208ENST00000530887 NMIQ13287 307 aaPredicted RBP21.33■■□□□ 1.01
PSMC3-208ENST00000530887 PHOSPHO2Q8TCD6 241 aa21.33■■□□□ 1.01
PSMC3-208ENST00000530887 RILPL2Q969X0 211 aa21.33■■□□□ 1.01
PSMC3-208ENST00000530887 WNT8AQ9H1J5 351 aa21.33■■□□□ 1.01
PSMC3-208ENST00000530887 OSBPL3Q9H4L5 887 aa21.33■■□□□ 1.01
PSMC3-208ENST00000530887 SCN10AQ9Y5Y9 1956 aa21.32■■□□□ 1
PSMC3-208ENST00000530887 PSMC6P62333 389 aa21.32■■□□□ 1
PSMC3-208ENST00000530887 ASPRV1Q53RT3 343 aa21.32■■□□□ 1
PSMC3-208ENST00000530887 SLC30A10Q6XR72 485 aa21.32■■□□□ 1
PSMC3-208ENST00000530887 IL27Q8NEV9 243 aa21.32■■□□□ 1
PSMC3-208ENST00000530887 IWS1Q96ST2 819 aa21.32■■□□□ 1
PSMC3-208ENST00000530887 CRBNQ96SW2 442 aa21.32■■□□□ 1
PSMC3-208ENST00000530887 SLC9A7Q96T83 725 aa21.32■■□□□ 1
PSMC3-208ENST00000530887 PRDM12Q9H4Q4 367 aa21.32■■□□□ 1
PSMC3-208ENST00000530887 KAT14Q9H8E8 782 aa21.32■■□□□ 1
PSMC3-208ENST00000530887 CXXC1Q9P0U4 656 aaPredicted RBP21.32■■□□□ 1
PSMC3-208ENST00000530887 CTNNA3Q9UI47 895 aa21.32■■□□□ 1
PSMC3-208ENST00000530887 PRUNE2Q8WUY3 3088 aa21.31■■□□□ 1
PSMC3-208ENST00000530887 ZBBXA8MT70 800 aa21.31■■□□□ 1
PSMC3-208ENST00000530887 GRXCR1A8MXD5 290 aa21.31■■□□□ 1
PSMC3-208ENST00000530887 TXNP10599 105 aaKnown RBP21.31■■□□□ 1
PSMC3-208ENST00000530887 ATP2A2P16615 1042 aaKnown RBP21.31■■□□□ 1
PSMC3-208ENST00000530887 SDSP20132 328 aa21.31■■□□□ 1
PSMC3-208ENST00000530887 HAND2P61296 217 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms