RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 ERVV-2B6SEH9 535 aa9.72□□□□□ -0.85
CHKA-205ENST00000530730 HSPA5P11021 654 aaKnown RBP9.72□□□□□ -0.85
CHKA-205ENST00000530730 GRK4P32298 578 aa9.72□□□□□ -0.85
CHKA-205ENST00000530730 DAB2P98082 770 aa9.72□□□□□ -0.85
CHKA-205ENST00000530730 FZD5Q13467 585 aa9.72□□□□□ -0.85
CHKA-205ENST00000530730 SEPT6Q14141 434 aa9.72□□□□□ -0.85
CHKA-205ENST00000530730 THAP5Q7Z6K1 395 aa9.72□□□□□ -0.85
CHKA-205ENST00000530730 NPAS4Q8IUM7 802 aa9.72□□□□□ -0.85
CHKA-205ENST00000530730 MIR1-1HGQ9H1L0 117 aa9.72□□□□□ -0.85
CHKA-205ENST00000530730 CAPN6Q9Y6Q1 641 aa9.72□□□□□ -0.85
CHKA-205ENST00000530730 KIF20BQ96Q89 1820 aa9.72□□□□□ -0.85
CHKA-205ENST00000530730 CEP350Q5VT06 3117 aa9.71□□□□□ -0.85
CHKA-205ENST00000530730 C5P01031 1676 aa9.71□□□□□ -0.85
CHKA-205ENST00000530730 C4BP0C0L5 1744 aa9.71□□□□□ -0.85
CHKA-205ENST00000530730 TOGARAM1Q9Y4F4 1720 aa9.71□□□□□ -0.85
CHKA-205ENST00000530730 PRR33A8MZF0 331 aa9.71□□□□□ -0.86
CHKA-205ENST00000530730 KIR3DL1P43629 444 aa9.71□□□□□ -0.86
CHKA-205ENST00000530730 PLEKHO1Q53GL0 409 aaPredicted RBP9.71□□□□□ -0.86
CHKA-205ENST00000530730 PRAMEF13Q5VWM6 474 aa9.71□□□□□ -0.86
CHKA-205ENST00000530730 RNF19AQ9NV58 838 aa9.71□□□□□ -0.86
CHKA-205ENST00000530730 ST14Q9Y5Y6 855 aa9.71□□□□□ -0.86
CHKA-205ENST00000530730 IGSF1Q8N6C5 1336 aa9.71□□□□□ -0.86
CHKA-205ENST00000530730 ATP10DQ9P241 1426 aa9.71□□□□□ -0.86
CHKA-205ENST00000530730 FAM155AB1AL88 458 aaPredicted RBP9.7□□□□□ -0.86
CHKA-205ENST00000530730 MMP10P09238 476 aa9.7□□□□□ -0.86
CHKA-205ENST00000530730 CYP7A1P22680 504 aa9.7□□□□□ -0.86
CHKA-205ENST00000530730 JAG1P78504 1218 aa9.7□□□□□ -0.86
CHKA-205ENST00000530730 TSNAXIP1Q2TAA8 658 aa9.7□□□□□ -0.86
CHKA-205ENST00000530730 DNAJC14Q6Y2X3 702 aaPredicted RBP9.7□□□□□ -0.86
CHKA-205ENST00000530730 CCDC84Q86UT8 332 aaPredicted RBP9.7□□□□□ -0.86
CHKA-205ENST00000530730 HSPA12BQ96MM6 686 aa9.7□□□□□ -0.86
CHKA-205ENST00000530730 PARP2Q9UGN5 583 aa9.7□□□□□ -0.86
CHKA-205ENST00000530730 CTNND2Q9UQB3 1225 aa9.7□□□□□ -0.86
CHKA-205ENST00000530730 CNTNAP4Q9C0A0 1308 aa9.7□□□□□ -0.86
CHKA-205ENST00000530730 PKD1L3Q7Z443 1732 aa9.7□□□□□ -0.86
CHKA-205ENST00000530730 FARP2O94887 1054 aaPredicted RBP9.69□□□□□ -0.86
CHKA-205ENST00000530730 HSP90AB1P08238 724 aaKnown RBP9.69□□□□□ -0.86
CHKA-205ENST00000530730 ITGB4P16144 1822 aa9.69□□□□□ -0.86
CHKA-205ENST00000530730 TFE3P19532 575 aaPredicted RBP9.69□□□□□ -0.86
CHKA-205ENST00000530730 RPL6Q02878 288 aaKnown RBP9.69□□□□□ -0.86
CHKA-205ENST00000530730 PDE4BQ07343 736 aa9.69□□□□□ -0.86
CHKA-205ENST00000530730 TAF1CQ15572 869 aaPredicted RBP9.69□□□□□ -0.86
CHKA-205ENST00000530730 AMOTQ4VCS5 1084 aa9.69□□□□□ -0.86
CHKA-205ENST00000530730 MEI1Q5TIA1 1274 aa9.69□□□□□ -0.86
CHKA-205ENST00000530730 SLC6A19Q695T7 634 aa9.69□□□□□ -0.86
CHKA-205ENST00000530730 TMC4Q7Z404 712 aa9.69□□□□□ -0.86
CHKA-205ENST00000530730 ZSWIM9Q86XI8 627 aa9.69□□□□□ -0.86
CHKA-205ENST00000530730 AEBP1Q8IUX7 1158 aa9.69□□□□□ -0.86
CHKA-205ENST00000530730 TAF1LQ8IZX4 1826 aa9.69□□□□□ -0.86
CHKA-205ENST00000530730 NLGN1Q8N2Q7 840 aa9.69□□□□□ -0.86
CHKA-205ENST00000530730 ZNF526Q8TF50 670 aaPredicted RBP9.69□□□□□ -0.86
CHKA-205ENST00000530730 PRDM7Q9NQW5 492 aa9.69□□□□□ -0.86
CHKA-205ENST00000530730 ADAM30Q9UKF2 790 aa9.69□□□□□ -0.86
CHKA-205ENST00000530730 KRTAP4-8A0A0G2JLE6 195 aa9.68□□□□□ -0.86
CHKA-205ENST00000530730 RPS6KA4O75676 772 aa9.68□□□□□ -0.86
CHKA-205ENST00000530730 MTHFSP49914 203 aa9.68□□□□□ -0.86
CHKA-205ENST00000530730 ZNF530Q6P9A1 599 aaPredicted RBP9.68□□□□□ -0.86
CHKA-205ENST00000530730 MORC1Q86VD1 984 aa9.68□□□□□ -0.86
CHKA-205ENST00000530730 RIN3Q8TB24 985 aa9.68□□□□□ -0.86
CHKA-205ENST00000530730 FAM53CQ9NYF3 392 aa9.68□□□□□ -0.86
CHKA-205ENST00000530730 TJP2Q9UDY2 1190 aa9.68□□□□□ -0.86
CHKA-205ENST00000530730 MAP2P11137 1827 aaKnown RBP9.68□□□□□ -0.86
CHKA-205ENST00000530730 ADCY9O60503 1353 aa9.67□□□□□ -0.86
CHKA-205ENST00000530730 KDRP35968 1356 aa9.67□□□□□ -0.86
CHKA-205ENST00000530730 PLEKHG2Q9H7P9 1386 aa9.67□□□□□ -0.86
CHKA-205ENST00000530730 A0A0G2JLW4 131 aa9.67□□□□□ -0.86
CHKA-205ENST00000530730 PGRP06401 933 aa9.67□□□□□ -0.86
CHKA-205ENST00000530730 GYS1P13807 737 aa9.67□□□□□ -0.86
CHKA-205ENST00000530730 TGFB2P61812 414 aa9.67□□□□□ -0.86
CHKA-205ENST00000530730 PSMD2Q13200 908 aa9.67□□□□□ -0.86
CHKA-205ENST00000530730 SULT6B1Q6IMI4 303 aa9.67□□□□□ -0.86
CHKA-205ENST00000530730 MCATQ8IVS2 390 aaKnown RBP9.67□□□□□ -0.86
CHKA-205ENST00000530730 PIWIL2Q8TC59 973 aaKnown RBP9.67□□□□□ -0.86
CHKA-205ENST00000530730 TMEM87BQ96K49 555 aa9.67□□□□□ -0.86
CHKA-205ENST00000530730 ATP13A1Q9HD20 1204 aa9.67□□□□□ -0.86
CHKA-205ENST00000530730 ANKRD26Q9UPS8 1709 aa9.67□□□□□ -0.86
CHKA-205ENST00000530730 UBR3Q6ZT12 1888 aa9.66□□□□□ -0.86
CHKA-205ENST00000530730 IL13P35225 146 aa9.66□□□□□ -0.86
CHKA-205ENST00000530730 RFC4P35249 363 aa9.66□□□□□ -0.86
CHKA-205ENST00000530730 AFMP43652 599 aa9.66□□□□□ -0.86
CHKA-205ENST00000530730 DIEXFQ68CQ4 756 aaKnown RBP9.66□□□□□ -0.86
CHKA-205ENST00000530730 PHC3Q8NDX5 983 aa9.66□□□□□ -0.86
CHKA-205ENST00000530730 BHLHE22Q8NFJ8 381 aaPredicted RBP9.66□□□□□ -0.86
CHKA-205ENST00000530730 CCDC120Q96HB5 630 aa9.66□□□□□ -0.86
CHKA-205ENST00000530730 KDM6AO15550 1401 aaPredicted RBP9.65□□□□□ -0.86
CHKA-205ENST00000530730 CTSHP09668 335 aa9.65□□□□□ -0.86
CHKA-205ENST00000530730 DPEP1P16444 411 aa9.65□□□□□ -0.86
CHKA-205ENST00000530730 ETV3P41162 512 aa9.65□□□□□ -0.86
CHKA-205ENST00000530730 MAP3K11Q16584 847 aa9.65□□□□□ -0.86
CHKA-205ENST00000530730 C1orf141Q5JVX7 400 aa9.65□□□□□ -0.86
CHKA-205ENST00000530730 CDKAL1Q5VV42 579 aa9.65□□□□□ -0.86
CHKA-205ENST00000530730 FBXO33Q7Z6M2 555 aa9.65□□□□□ -0.86
CHKA-205ENST00000530730 CARS2Q9HA77 564 aaKnown RBP9.65□□□□□ -0.86
CHKA-205ENST00000530730 KNSTRNQ9Y448 316 aa9.65□□□□□ -0.86
CHKA-205ENST00000530730 H3BS24 57 aa9.64□□□□□ -0.87
CHKA-205ENST00000530730 HSPA6P17066 643 aa9.64□□□□□ -0.87
CHKA-205ENST00000530730 KCNA3P22001 575 aa9.64□□□□□ -0.87
CHKA-205ENST00000530730 GDNFP39905 211 aa9.64□□□□□ -0.87
CHKA-205ENST00000530730 CRKLP46109 303 aaKnown RBP9.64□□□□□ -0.87
CHKA-205ENST00000530730 CNGB1Q14028 1251 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms