RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 GCFC2P16383 781 aaKnown RBP17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 MSNP26038 577 aaKnown RBP17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 FXR2P51116 673 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 NBPF12Q5TAG4 269 aaPredicted RBP17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 CABP7Q86V35 215 aa17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 RASSF8Q8NHQ8 419 aa17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 TRPM4Q8TD43 1214 aa17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 LRRC15Q8TF66 581 aa17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 CHURC1Q8WUH1 139 aa17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 ZNF341Q9BYN7 854 aa17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 BLZF1Q9H2G9 400 aa17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 GPRC5DQ9NZD1 345 aa17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 DDX25Q9UHL0 483 aaKnown RBP17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 DACH1Q9UI36 760 aa17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 SMCHD1A6NHR9 2005 aa17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 TPM4P67936 248 aa17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 CUL4BQ13620 913 aa17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 MMTAG2Q9BU76 263 aaKnown RBP17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 RANBP17Q9H2T7 1088 aaKnown RBP17.44■□□□□ 0.38
CCDC90B-213ENST00000529611 SRCAPQ6ZRS2 3230 aa17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 GOLGA6L6A8MZA4 724 aa17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 CTNND1O60716 968 aaKnown RBP17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 LMOD1P29536 600 aaPredicted RBP17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 CLCN1P35523 988 aa17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 FMR1Q06787 632 aaKnown RBP eCLIP17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 FAM160B2Q86V87 743 aa17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 GPC2Q8N158 579 aa17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 CRYGNQ8WXF5 182 aa17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 KIFC2Q96AC6 838 aa17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 ZNF830Q96NB3 372 aaPredicted RBP17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 PLIN2Q99541 437 aa17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 TTC12Q9H892 705 aaPredicted RBP17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 GINM1Q9NU53 330 aa17.43■□□□□ 0.38
CCDC90B-213ENST00000529611 PLCG1P19174 1290 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 USP11P51784 963 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 ANGEL2Q5VTE6 544 aaKnown RBP17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 MCTP2Q6DN12 878 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 DRC7Q8IY82 874 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 HAS1Q92839 578 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 FEZ1Q99689 392 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 NAP1L4Q99733 375 aaKnown RBP17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 FBXO28Q9NVF7 368 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 FEM1BQ9UK73 627 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 SBF1O95248 1867 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 TMEM266Q2M3C6 531 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 APOBEC3FQ8IUX4 373 aaKnown RBP17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 MED15Q96RN5 788 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 CUEDC2Q9H467 287 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 KBTBD4Q9NVX7 518 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 LRWD1Q9UFC0 647 aa17.42■□□□□ 0.38
CCDC90B-213ENST00000529611 CYP3A7-CYP3A51PA0A087WV96 503 aa17.41■□□□□ 0.38
CCDC90B-213ENST00000529611 FOSP01100 380 aaPredicted RBP17.41■□□□□ 0.38
CCDC90B-213ENST00000529611 ATP1A3P13637 1013 aa17.41■□□□□ 0.38
CCDC90B-213ENST00000529611 CYP3A7P24462 503 aa17.41■□□□□ 0.38
CCDC90B-213ENST00000529611 INPP5BP32019 993 aa17.41■□□□□ 0.38
CCDC90B-213ENST00000529611 TRAF1Q13077 416 aa17.41■□□□□ 0.38
CCDC90B-213ENST00000529611 PDIA5Q14554 519 aa17.41■□□□□ 0.38
CCDC90B-213ENST00000529611 CCDC174Q6PII3 467 aa17.41■□□□□ 0.38
CCDC90B-213ENST00000529611 MBOAT7Q96N66 472 aa17.41■□□□□ 0.38
CCDC90B-213ENST00000529611 KIAA1683Q9H0B3 1180 aa17.41■□□□□ 0.38
CCDC90B-213ENST00000529611 NRBP1Q9UHY1 535 aa17.41■□□□□ 0.38
CCDC90B-213ENST00000529611 POTEMA6NI47 508 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 PIK3CDO00329 1044 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 TPM3P06753 285 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 CD44P16070 742 aaKnown RBP17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 ERCC5P28715 1186 aaPredicted RBP17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 EPS15P42566 896 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 ARHGAP4P98171 946 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 CT47A1Q5JQC4 288 aaPredicted RBP17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 MOXD1Q6UVY6 613 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 ENOX1Q8TC92 643 aaKnown RBP17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 RAB34Q9BZG1 259 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 KCNF1Q9H3M0 494 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 FANCLQ9NW38 375 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 SPDYE3A6NKU9 549 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 HOXA13P31271 388 aaPredicted RBP17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 SREBF1P36956 1147 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 DCAF15Q66K64 600 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 CCDC186Q7Z3E2 898 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 TRMT44Q8IYL2 757 aaKnown RBP17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 SMYD4Q8IYR2 804 aaPredicted RBP17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 LPAR1Q92633 364 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 XPO4Q9C0E2 1151 aaKnown RBP17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 MAGEF1Q9HAY2 307 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 KCNMB3Q9NPA1 279 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 GGA3Q9NZ52 723 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 IFNKQ9P0W0 207 aa17.4■□□□□ 0.38
CCDC90B-213ENST00000529611 WDR46O15213 610 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-213ENST00000529611 RPN1P04843 607 aaKnown RBP17.39■□□□□ 0.37
CCDC90B-213ENST00000529611 MYL1P05976 194 aa17.39■□□□□ 0.37
CCDC90B-213ENST00000529611 PTGS1P23219 599 aa17.39■□□□□ 0.37
CCDC90B-213ENST00000529611 HIRAP54198 1017 aaPredicted RBP17.39■□□□□ 0.37
CCDC90B-213ENST00000529611 FANCCQ00597 558 aa17.39■□□□□ 0.37
CCDC90B-213ENST00000529611 PRAMEF18Q5VWM3 479 aa17.39■□□□□ 0.37
CCDC90B-213ENST00000529611 GJA10Q969M2 543 aa17.39■□□□□ 0.37
CCDC90B-213ENST00000529611 CALML4Q96GE6 196 aa17.39■□□□□ 0.37
CCDC90B-213ENST00000529611 ZNF112Q9UJU3 913 aa17.39■□□□□ 0.37
CCDC90B-213ENST00000529611 DOCK1Q14185 1865 aa17.39■□□□□ 0.37
CCDC90B-213ENST00000529611 PPP1R3GB7ZBB8 358 aa17.39■□□□□ 0.37
CCDC90B-213ENST00000529611 ZNF500O60304 480 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms