RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 ALDH5A1P51649 535 aaPredicted RBP19.53■□□□□ 0.72
HIF3A-211ENST00000528563 TRAF1Q13077 416 aa19.53■□□□□ 0.72
HIF3A-211ENST00000528563 BLOC1S2Q6QNY1 142 aa19.53■□□□□ 0.72
HIF3A-211ENST00000528563 SYNE3Q6ZMZ3 975 aa19.53■□□□□ 0.72
HIF3A-211ENST00000528563 HOMER1Q86YM7 354 aa19.53■□□□□ 0.72
HIF3A-211ENST00000528563 FBXL16Q8N461 479 aa19.53■□□□□ 0.72
HIF3A-211ENST00000528563 DNERQ8NFT8 737 aa19.53■□□□□ 0.72
HIF3A-211ENST00000528563 C11orf49Q9H6J7 331 aa19.53■□□□□ 0.72
HIF3A-211ENST00000528563 ZHX1Q9UKY1 873 aaPredicted RBP19.53■□□□□ 0.72
HIF3A-211ENST00000528563 DNM1LO00429 736 aa19.52■□□□□ 0.72
HIF3A-211ENST00000528563 PLEKHA8P1O95397 391 aa19.52■□□□□ 0.72
HIF3A-211ENST00000528563 PSMA5P28066 241 aa19.52■□□□□ 0.72
HIF3A-211ENST00000528563 GHRHRQ02643 423 aa19.52■□□□□ 0.72
HIF3A-211ENST00000528563 LRRC41Q15345 812 aa19.52■□□□□ 0.72
HIF3A-211ENST00000528563 GJC2Q5T442 439 aaPredicted RBP19.52■□□□□ 0.72
HIF3A-211ENST00000528563 RAB11FIP4Q86YS3 637 aa19.52■□□□□ 0.72
HIF3A-211ENST00000528563 SYTL5Q8TDW5 730 aaPredicted RBP19.52■□□□□ 0.72
HIF3A-211ENST00000528563 XPNPEP3Q9NQH7 507 aa19.52■□□□□ 0.72
HIF3A-211ENST00000528563 FRMPD3Q5JV73 1810 aa19.51■□□□□ 0.71
HIF3A-211ENST00000528563 RPS6KB1P23443 525 aa19.51■□□□□ 0.71
HIF3A-211ENST00000528563 TAPT1Q6NXT6 567 aa19.51■□□□□ 0.71
HIF3A-211ENST00000528563 CMTR1Q8N1G2 835 aaKnown RBP19.51■□□□□ 0.71
HIF3A-211ENST00000528563 SAMD3Q8N6K7 520 aa19.51■□□□□ 0.71
HIF3A-211ENST00000528563 DPF3Q92784 378 aa19.51■□□□□ 0.71
HIF3A-211ENST00000528563 RRP36Q96EU6 259 aaKnown RBP19.51■□□□□ 0.71
HIF3A-211ENST00000528563 AGXT2Q9BYV1 514 aa19.51■□□□□ 0.71
HIF3A-211ENST00000528563 ZSWIM6Q9HCJ5 1215 aa19.51■□□□□ 0.71
HIF3A-211ENST00000528563 MAP3K20Q9NYL2 800 aaKnown RBP19.51■□□□□ 0.71
HIF3A-211ENST00000528563 COL20A1Q9P218 1284 aa19.51■□□□□ 0.71
HIF3A-211ENST00000528563 ADCY6O43306 1168 aa19.5■□□□□ 0.71
HIF3A-211ENST00000528563 DUSP11O75319 330 aaKnown RBP19.5■□□□□ 0.71
HIF3A-211ENST00000528563 PGK1P00558 417 aa19.5■□□□□ 0.71
HIF3A-211ENST00000528563 CASTP20810 708 aaKnown RBP19.5■□□□□ 0.71
HIF3A-211ENST00000528563 EDNRBP24530 442 aa19.5■□□□□ 0.71
HIF3A-211ENST00000528563 HSD17B4P51659 736 aa19.5■□□□□ 0.71
HIF3A-211ENST00000528563 Q6ZUG5 572 aa19.5■□□□□ 0.71
HIF3A-211ENST00000528563 TMTC3Q6ZXV5 915 aa19.5■□□□□ 0.71
HIF3A-211ENST00000528563 MICU3Q86XE3 530 aa19.5■□□□□ 0.71
HIF3A-211ENST00000528563 PIBF1Q8WXW3 757 aa19.5■□□□□ 0.71
HIF3A-211ENST00000528563 LENG1Q96BZ8 264 aaPredicted RBP19.5■□□□□ 0.71
HIF3A-211ENST00000528563 TAAR1Q96RJ0 339 aa19.5■□□□□ 0.71
HIF3A-211ENST00000528563 TM6SF1Q9BZW5 370 aa19.5■□□□□ 0.71
HIF3A-211ENST00000528563 ZBTB43O43298 467 aa19.49■□□□□ 0.71
HIF3A-211ENST00000528563 CFBP00751 764 aa19.49■□□□□ 0.71
HIF3A-211ENST00000528563 IQSEC1Q6DN90 963 aa19.49■□□□□ 0.71
HIF3A-211ENST00000528563 EEPD1Q7L9B9 569 aa19.49■□□□□ 0.71
HIF3A-211ENST00000528563 VTA1Q9NP79 307 aa19.49■□□□□ 0.71
HIF3A-211ENST00000528563 PDGFCQ9NRA1 345 aa19.49■□□□□ 0.71
HIF3A-211ENST00000528563 FAM217BQ9NTX9 383 aaPredicted RBP19.49■□□□□ 0.71
HIF3A-211ENST00000528563 KLF18A0A0U1RQI7 1052 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 ADAMTS4O75173 837 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 RCAN1P53805 252 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 FGD1P98174 961 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 TNFAIP2Q03169 654 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 PRPF38BQ5VTL8 546 aaKnown RBP19.48■□□□□ 0.71
HIF3A-211ENST00000528563 RUFY3Q7L099 469 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 NSUN6Q8TEA1 469 aaKnown RBP19.48■□□□□ 0.71
HIF3A-211ENST00000528563 BRF1Q92994 677 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 SENP6Q9GZR1 1112 aaPredicted RBP19.48■□□□□ 0.71
HIF3A-211ENST00000528563 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.48■□□□□ 0.71
HIF3A-211ENST00000528563 B4DLN1 442 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 KBTBD13C9JR72 458 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 ADCYAP1R1P41586 468 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 MRPL12P52815 198 aaKnown RBP19.48■□□□□ 0.71
HIF3A-211ENST00000528563 APOBRQ0VD83 1088 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 FUT2Q10981 343 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 RNF180Q86T96 592 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 FBXO16Q8IX29 292 aaPredicted RBP19.48■□□□□ 0.71
HIF3A-211ENST00000528563 CCDC82Q8N4S0 544 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 KLHDC9Q8NEP7 349 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 RMDN3Q96TC7 470 aa19.48■□□□□ 0.71
HIF3A-211ENST00000528563 UPF3AQ9H1J1 476 aaKnown RBP19.48■□□□□ 0.71
HIF3A-211ENST00000528563 RBM28Q9NW13 759 aaKnown RBP19.48■□□□□ 0.71
HIF3A-211ENST00000528563 SYNRGQ9UMZ2 1314 aa19.47■□□□□ 0.71
HIF3A-211ENST00000528563 RBM47A0AV96 593 aaKnown RBP19.47■□□□□ 0.71
HIF3A-211ENST00000528563 MYCNP04198 464 aaPredicted RBP19.47■□□□□ 0.71
HIF3A-211ENST00000528563 EVCP57679 992 aa19.47■□□□□ 0.71
HIF3A-211ENST00000528563 GJA9P57773 515 aa19.47■□□□□ 0.71
HIF3A-211ENST00000528563 NKX3-2P78367 333 aa19.47■□□□□ 0.71
HIF3A-211ENST00000528563 PDE4DQ08499 809 aa19.47■□□□□ 0.71
HIF3A-211ENST00000528563 PPP2R5BQ15173 497 aa19.47■□□□□ 0.71
HIF3A-211ENST00000528563 RTN1Q16799 776 aa19.47■□□□□ 0.71
HIF3A-211ENST00000528563 CCSAPQ6IQ19 270 aaPredicted RBP19.47■□□□□ 0.71
HIF3A-211ENST00000528563 IWS1Q96ST2 819 aa19.47■□□□□ 0.71
HIF3A-211ENST00000528563 MPHOSPH6Q99547 160 aaKnown RBP19.47■□□□□ 0.71
HIF3A-211ENST00000528563 TSEN34Q9BSV6 310 aaKnown RBP19.47■□□□□ 0.71
HIF3A-211ENST00000528563 SEC63Q9UGP8 760 aaKnown RBP19.47■□□□□ 0.71
HIF3A-211ENST00000528563 PHF24Q9UPV7 400 aa19.47■□□□□ 0.71
HIF3A-211ENST00000528563 GNEQ9Y223 722 aaKnown RBP19.47■□□□□ 0.71
HIF3A-211ENST00000528563 CTAGE5O15320 804 aa19.46■□□□□ 0.71
HIF3A-211ENST00000528563 EVI5O60447 810 aa19.46■□□□□ 0.71
HIF3A-211ENST00000528563 SMPD1P17405 629 aa19.46■□□□□ 0.71
HIF3A-211ENST00000528563 CDC27P30260 824 aa19.46■□□□□ 0.71
HIF3A-211ENST00000528563 TMEM63BQ5T3F8 832 aa19.46■□□□□ 0.71
HIF3A-211ENST00000528563 NR2E3Q9Y5X4 410 aa19.46■□□□□ 0.71
HIF3A-211ENST00000528563 CYP46A1Q9Y6A2 500 aa19.46■□□□□ 0.71
HIF3A-211ENST00000528563 hCG_1642624A0A1W2PR95 340 aa19.45■□□□□ 0.7
HIF3A-211ENST00000528563 H0YGN5 161 aa19.45■□□□□ 0.7
HIF3A-211ENST00000528563 GCOM1H8Y6P7 765 aaPredicted RBP19.45■□□□□ 0.7
HIF3A-211ENST00000528563 EIF5BO60841 1220 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms