RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 INF2Q27J81 1249 aa8.67□□□□□ -1.02
PCF11-202ENST00000528336 FAM209AQ5JX71 171 aa8.67□□□□□ -1.02
PCF11-202ENST00000528336 MBLAC2Q68D91 279 aa8.67□□□□□ -1.02
PCF11-202ENST00000528336 ASIC4Q96FT7 647 aa8.67□□□□□ -1.02
PCF11-202ENST00000528336 LIN37Q96GY3 246 aaPredicted RBP8.67□□□□□ -1.02
PCF11-202ENST00000528336 BLACEA4D250 179 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 ARNTLO00327 626 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 MSL3P1P0C860 447 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 SDHBP21912 280 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 CYP4F8P98187 520 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 MVKQ03426 396 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 MAP4K2Q12851 820 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 SLC35F1Q5T1Q4 408 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 MPZL3Q6UWV2 235 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 USP53Q70EK8 1073 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 CCDC103Q8IW40 242 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 DIO2Q92813 273 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 MMP19Q99542 508 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 BTG4Q9NY30 223 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 ACSL6Q9UKU0 697 aa8.66□□□□□ -1.02
PCF11-202ENST00000528336 YBX2Q9Y2T7 364 aaKnown RBP8.66□□□□□ -1.02
PCF11-202ENST00000528336 TRBV23-1A0A0A0MS06 115 aa8.65□□□□□ -1.02
PCF11-202ENST00000528336 A0A1W2PQJ5 194 aa8.65□□□□□ -1.02
PCF11-202ENST00000528336 C7orf72A4D263 438 aa8.65□□□□□ -1.02
PCF11-202ENST00000528336 ZNF503-AS2A6NEH8 195 aa8.65□□□□□ -1.02
PCF11-202ENST00000528336 NPHS1O60500 1241 aa8.65□□□□□ -1.02
PCF11-202ENST00000528336 TACR1P25103 407 aa8.65□□□□□ -1.02
PCF11-202ENST00000528336 IQCEQ6IPM2 695 aa8.65□□□□□ -1.02
PCF11-202ENST00000528336 SCUBE1Q8IWY4 988 aa8.65□□□□□ -1.02
PCF11-202ENST00000528336 THAP3Q8WTV1 239 aaPredicted RBP8.65□□□□□ -1.02
PCF11-202ENST00000528336 C1orf159Q96HA4 380 aa8.65□□□□□ -1.02
PCF11-202ENST00000528336 GULP1Q9UBP9 304 aa8.65□□□□□ -1.02
PCF11-202ENST00000528336 RWDD3Q9Y3V2 267 aa8.65□□□□□ -1.02
PCF11-202ENST00000528336 PPP1R11O60927 126 aaPredicted RBP8.64□□□□□ -1.03
PCF11-202ENST00000528336 LCP1P13796 627 aa8.64□□□□□ -1.03
PCF11-202ENST00000528336 PNLIPP16233 465 aa8.64□□□□□ -1.03
PCF11-202ENST00000528336 PDE6BP35913 854 aa8.64□□□□□ -1.03
PCF11-202ENST00000528336 LTBRP36941 435 aa8.64□□□□□ -1.03
PCF11-202ENST00000528336 E4F1Q66K89 784 aaPredicted RBP8.64□□□□□ -1.03
PCF11-202ENST00000528336 CRTAC1Q9NQ79 661 aa8.64□□□□□ -1.03
PCF11-202ENST00000528336 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.63□□□□□ -1.03
PCF11-202ENST00000528336 RCBTB1Q8NDN9 531 aa8.63□□□□□ -1.03
PCF11-202ENST00000528336 USP33Q8TEY7 942 aa8.63□□□□□ -1.03
PCF11-202ENST00000528336 INTS4Q96HW7 963 aaKnown RBP8.63□□□□□ -1.03
PCF11-202ENST00000528336 EXOC2Q96KP1 924 aa8.63□□□□□ -1.03
PCF11-202ENST00000528336 KANSL2Q9H9L4 492 aa8.63□□□□□ -1.03
PCF11-202ENST00000528336 PDLIM7Q9NR12 457 aa8.63□□□□□ -1.03
PCF11-202ENST00000528336 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.63□□□□□ -1.03
PCF11-202ENST00000528336 LOC105371045A0A1W2PR82 267 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 ARL4AP40617 200 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 KCNAB2Q13303 367 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 NTRK3Q16288 839 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 LONRF2Q1L5Z9 754 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 C2orf27AQ580R0 203 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 ADGRF1Q5T601 910 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 ACBD5Q5T8D3 534 aaPredicted RBP8.62□□□□□ -1.03
PCF11-202ENST00000528336 LZTR1Q8N653 840 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 SH3TC2Q8TF17 1288 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 DPF3Q92784 378 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 SLC26A8Q96RN1 970 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 DHRS4Q9BTZ2 278 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 SLC6A17Q9H1V8 727 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.62□□□□□ -1.03
PCF11-202ENST00000528336 PCDHA2Q9Y5H9 948 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 TIMM13Q9Y5L4 95 aaPredicted RBP8.62□□□□□ -1.03
PCF11-202ENST00000528336 PTCH2Q9Y6C5 1203 aa8.62□□□□□ -1.03
PCF11-202ENST00000528336 FUCA1P04066 466 aa8.61□□□□□ -1.03
PCF11-202ENST00000528336 MLANAQ16655 118 aa8.61□□□□□ -1.03
PCF11-202ENST00000528336 BICRALQ6AI39 1079 aa8.61□□□□□ -1.03
PCF11-202ENST00000528336 KCNT2Q6UVM3 1135 aa8.61□□□□□ -1.03
PCF11-202ENST00000528336 PRR23BQ6ZRT6 265 aa8.61□□□□□ -1.03
PCF11-202ENST00000528336 NLGN2Q8NFZ4 835 aa8.61□□□□□ -1.03
PCF11-202ENST00000528336 CHAMP1Q96JM3 812 aa8.61□□□□□ -1.03
PCF11-202ENST00000528336 DIRC2Q96SL1 478 aa8.61□□□□□ -1.03
PCF11-202ENST00000528336 PHF20Q9BVI0 1012 aa8.61□□□□□ -1.03
PCF11-202ENST00000528336 KCNK12Q9HB15 430 aa8.61□□□□□ -1.03
PCF11-202ENST00000528336 MRPS23Q9Y3D9 190 aaKnown RBP8.61□□□□□ -1.03
PCF11-202ENST00000528336 LRRC10BA6NIK2 292 aa8.6□□□□□ -1.03
PCF11-202ENST00000528336 MYO1BO43795 1136 aa8.6□□□□□ -1.03
PCF11-202ENST00000528336 BCL6P41182 706 aa8.6□□□□□ -1.03
PCF11-202ENST00000528336 RPL11P62913 178 aaKnown RBP8.6□□□□□ -1.03
PCF11-202ENST00000528336 SUMO1P63165 101 aaKnown RBP8.6□□□□□ -1.03
PCF11-202ENST00000528336 JMYQ8N9B5 988 aa8.6□□□□□ -1.03
PCF11-202ENST00000528336 ZSWIM2Q8NEG5 633 aa8.6□□□□□ -1.03
PCF11-202ENST00000528336 DCAF4Q8WV16 495 aa8.6□□□□□ -1.03
PCF11-202ENST00000528336 MARCH2Q9P0N8 246 aa8.6□□□□□ -1.03
PCF11-202ENST00000528336 FBLN5Q9UBX5 448 aa8.6□□□□□ -1.03
PCF11-202ENST00000528336 CORO7P57737 925 aa8.59□□□□□ -1.03
PCF11-202ENST00000528336 ZC3H12BQ5HYM0 836 aaKnown RBP8.59□□□□□ -1.03
PCF11-202ENST00000528336 TEX2Q8IWB9 1127 aa8.59□□□□□ -1.03
PCF11-202ENST00000528336 RNPC3Q96LT9 517 aaKnown RBP8.59□□□□□ -1.03
PCF11-202ENST00000528336 MTA3Q9BTC8 594 aa8.59□□□□□ -1.03
PCF11-202ENST00000528336 NSUN3Q9H649 340 aaKnown RBP8.59□□□□□ -1.03
PCF11-202ENST00000528336 FAM53CQ9NYF3 392 aa8.59□□□□□ -1.03
PCF11-202ENST00000528336 OR14I1A6ND48 311 aa8.58□□□□□ -1.04
PCF11-202ENST00000528336 NUDT19A8MXV4 375 aa8.58□□□□□ -1.04
PCF11-202ENST00000528336 MSCO60682 206 aa8.58□□□□□ -1.04
PCF11-202ENST00000528336 MPOP05164 745 aa8.58□□□□□ -1.04
PCF11-202ENST00000528336 SQSTM1Q13501 440 aa8.58□□□□□ -1.04
PCF11-202ENST00000528336 TESK1Q15569 626 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms