RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 TRIM9Q9C026 710 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 LRRC27Q9C0I9 530 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 NUCKS1Q9H1E3 243 aaKnown RBP11.46□□□□□ -0.57
MSRA-210ENST00000528246 STK17AQ9UEE5 414 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 TSKSQ9UJT2 592 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 HPCAL4Q9UM19 191 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 PCDHA6Q9UN73 950 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
MSRA-210ENST00000528246 FAN1Q9Y2M0 1017 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 PCDHA8Q9Y5H6 950 aa11.46□□□□□ -0.57
MSRA-210ENST00000528246 TNRC6CQ9HCJ0 1690 aaKnown RBP11.46□□□□□ -0.57
MSRA-210ENST00000528246 ZC3H4Q9UPT8 1303 aaKnown RBP11.46□□□□□ -0.58
MSRA-210ENST00000528246 PALM3A6NDB9 673 aaPredicted RBP11.46□□□□□ -0.58
MSRA-210ENST00000528246 LRRIQ3A6PVS8 624 aaPredicted RBP11.46□□□□□ -0.58
MSRA-210ENST00000528246 MYO1CO00159 1063 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 PJA2O43164 708 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 SLC26A4O43511 780 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 TCP1P17987 556 aaKnown RBP11.46□□□□□ -0.58
MSRA-210ENST00000528246 GNA11P29992 359 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 CDC25AP30304 524 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 PPP4CP60510 307 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 TBC1D8BQ0IIM8 1120 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 NNTQ13423 1086 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 GLE1Q53GS7 698 aaKnown RBP11.46□□□□□ -0.58
MSRA-210ENST00000528246 CENPPQ6IPU0 288 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 CCNI2Q6ZMN8 369 aaPredicted RBP11.46□□□□□ -0.58
MSRA-210ENST00000528246 PNMA1Q8ND90 353 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 AFAP1L1Q8TED9 768 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 SECISBP2LQ93073 1101 aaKnown RBP11.46□□□□□ -0.58
MSRA-210ENST00000528246 NYXQ9GZU5 481 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 NHEJ1Q9H9Q4 299 aaPredicted RBP11.46□□□□□ -0.58
MSRA-210ENST00000528246 LRRC4BQ9NT99 713 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 FAM184BQ9ULE4 1060 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 MYH1P12882 1939 aa11.46□□□□□ -0.58
MSRA-210ENST00000528246 MYH14Q7Z406 1995 aaKnown RBP11.45□□□□□ -0.58
MSRA-210ENST00000528246 FAM205AQ6ZU69 1335 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 STXBP3O00186 592 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 PPFIA4O75335 1185 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 TACC1O75410 805 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 SYF2O95926 243 aaKnown RBP11.45□□□□□ -0.58
MSRA-210ENST00000528246 ABL1P00519 1130 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 ATP1A1P05023 1023 aaKnown RBP11.45□□□□□ -0.58
MSRA-210ENST00000528246 OR52Z1P0C646 297 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 HIBADHP31937 336 aaKnown RBP11.45□□□□□ -0.58
MSRA-210ENST00000528246 GSTO1P78417 241 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 LRRC63Q05C16 580 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 PSMD2Q13200 908 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 SEPT2Q15019 361 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 SPA17Q15506 151 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 NCAPH2Q6IBW4 605 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 RNF10Q8N5U6 811 aaKnown RBP11.45□□□□□ -0.58
MSRA-210ENST00000528246 SYN2Q92777 582 aaPredicted RBP11.45□□□□□ -0.58
MSRA-210ENST00000528246 STAMQ92783 540 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 CCDC102AQ96A19 550 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 MMS19Q96T76 1030 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 SYT17Q9BSW7 474 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 EFCC1Q9HA90 598 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 MAD2L2Q9UI95 211 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 SNX12Q9UMY4 172 aa11.45□□□□□ -0.58
MSRA-210ENST00000528246 RRP15Q9Y3B9 282 aaKnown RBP11.45□□□□□ -0.58
MSRA-210ENST00000528246 CYP2D7A0A087X1C5 515 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 SSU72P8A0A1W2PR75 194 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 hCG_1642624A0A1W2PR95 340 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 RNF40O75150 1001 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 EPB41P11171 864 aaKnown RBP11.44□□□□□ -0.58
MSRA-210ENST00000528246 NOVP48745 357 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 PMS1P54277 932 aaKnown RBP11.44□□□□□ -0.58
MSRA-210ENST00000528246 KCNQ4P56696 695 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 APBA1Q02410 837 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 MIIPQ5JXC2 388 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 EMBQ6PCB8 327 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 CABP7Q86V35 215 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 AENQ8WTP8 325 aaKnown RBP11.44□□□□□ -0.58
MSRA-210ENST00000528246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.44□□□□□ -0.58
MSRA-210ENST00000528246 CNOT6LQ96LI5 555 aaKnown RBP11.44□□□□□ -0.58
MSRA-210ENST00000528246 CCDC42Q96M95 316 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 C10orf71Q711Q0 1435 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 COL4A1P02462 1669 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 CNTNAP4Q9C0A0 1308 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 IRS2Q9Y4H2 1338 aa11.44□□□□□ -0.58
MSRA-210ENST00000528246 TRIM49BA6NDI0 452 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 RASSF10A6NK89 507 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 B4DLN1 442 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 MAGEA9P43362 315 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
MSRA-210ENST00000528246 NONOQ15233 471 aaKnown RBP eCLIP11.43□□□□□ -0.58
MSRA-210ENST00000528246 ALS2CLQ60I27 953 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 GUF1Q8N442 669 aaKnown RBP11.43□□□□□ -0.58
MSRA-210ENST00000528246 C1orf131Q8NDD1 294 aaKnown RBP11.43□□□□□ -0.58
MSRA-210ENST00000528246 WDR66Q8TBY9 1149 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 ALS2CR12Q96Q35 445 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 CRACR2AQ9BSW2 395 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 FHDC1Q9C0D6 1143 aaPredicted RBP11.43□□□□□ -0.58
MSRA-210ENST00000528246 SH2D4AQ9H788 454 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 FAM204AQ9H8W3 233 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 C6orf50Q9HD87 102 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 IL17RBQ9NRM6 502 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 ATP8B3O60423 1300 aa11.43□□□□□ -0.58
MSRA-210ENST00000528246 GOLGA8KD6RF30 607 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms