RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 KLC4Q9NSK0 619 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 ARHGAP20Q9P2F6 1191 aa16.27■□□□□ 0.2
CAPN1-214ENST00000528165 CNTNAP5Q8WYK1 1306 aa16.27■□□□□ 0.19
CAPN1-214ENST00000528165 SCG2P13521 617 aa16.27■□□□□ 0.19
CAPN1-214ENST00000528165 CCNE1P24864 410 aa16.27■□□□□ 0.19
CAPN1-214ENST00000528165 EIF4A3P38919 411 aaKnown RBP16.27■□□□□ 0.19
CAPN1-214ENST00000528165 CARSP49589 748 aaKnown RBP16.27■□□□□ 0.19
CAPN1-214ENST00000528165 ACTN3Q08043 901 aaPredicted RBP16.27■□□□□ 0.19
CAPN1-214ENST00000528165 SEMA3FQ13275 785 aa16.27■□□□□ 0.19
CAPN1-214ENST00000528165 GIGYF2Q6Y7W6 1299 aaKnown RBP16.27■□□□□ 0.19
CAPN1-214ENST00000528165 ZCRB1Q8TBF4 217 aaKnown RBP16.27■□□□□ 0.19
CAPN1-214ENST00000528165 MYCBPAPQ8TBZ2 947 aa16.27■□□□□ 0.19
CAPN1-214ENST00000528165 ZKSCAN4Q969J2 545 aaPredicted RBP16.27■□□□□ 0.19
CAPN1-214ENST00000528165 CCDC47Q96A33 483 aaKnown RBP16.27■□□□□ 0.19
CAPN1-214ENST00000528165 PLIN2Q99541 437 aa16.27■□□□□ 0.19
CAPN1-214ENST00000528165 EPB41L5Q9HCM4 733 aa16.27■□□□□ 0.19
CAPN1-214ENST00000528165 SUFUQ9UMX1 484 aa16.27■□□□□ 0.19
CAPN1-214ENST00000528165 HEXIM1O94992 359 aaKnown RBP16.26■□□□□ 0.19
CAPN1-214ENST00000528165 GLI1P08151 1106 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 FAM153BP0C7A2 387 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 HNRNPH3P31942 346 aaKnown RBP16.26■□□□□ 0.19
CAPN1-214ENST00000528165 MDH1P40925 334 aaKnown RBP16.26■□□□□ 0.19
CAPN1-214ENST00000528165 UBA7P41226 1012 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 CDR1P51861 262 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 SMTNP53814 917 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 SEC24CP53992 1094 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 IFT88Q13099 833 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 NEDD9Q14511 834 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 PLCB4Q15147 1175 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 FAM153CQ494X1 144 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 MIIPQ5JXC2 388 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 EMC10Q5UCC4 262 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 ANKRD40Q6AI12 368 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 DTHD1Q6ZMT9 781 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 CABLES1Q8TDN4 633 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 GDF3Q9NR23 364 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 FAM153AQ9UHL3 310 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 ANAPC4Q9UJX5 808 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 DDAH1O94760 285 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 GUCY2DQ02846 1103 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-214ENST00000528165 CCDC13Q8IYE1 715 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 SRBD1Q8N5C6 995 aaKnown RBP16.26■□□□□ 0.19
CAPN1-214ENST00000528165 ATP6V1G3Q96LB4 118 aa16.26■□□□□ 0.19
CAPN1-214ENST00000528165 TRMT112Q9UI30 125 aaKnown RBP16.26■□□□□ 0.19
CAPN1-214ENST00000528165 KIF13AQ9H1H9 1805 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 ESYT3A0FGR9 886 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 PP2D1A8MPX8 630 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 CLSTN1O94985 981 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 FAM107AO95990 144 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 MAGEA1P43355 309 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 GUCY2FP51841 1108 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 HDLBPQ00341 1268 aaKnown RBP16.25■□□□□ 0.19
CAPN1-214ENST00000528165 CD302Q8IX05 232 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 C4orf32Q8N8J7 132 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 NOX5Q96PH1 765 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 TLR10Q9BXR5 811 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 CENPHQ9H3R5 247 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 GGA2Q9UJY4 613 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 MYH10P35580 1976 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 HMGB1P1B2RPK0 211 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-214ENST00000528165 E7EVH7 732 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 SMIM22K7EJ46 135 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 SNAP23O00161 211 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 CYP7A1P22680 504 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 MREGQ8N565 214 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 ANKRD13CQ8N6S4 541 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 MS4A14Q96JA4 679 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 FAM207AQ9NSI2 230 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-214ENST00000528165 KBTBD4Q9NVX7 518 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 RNF14Q9UBS8 474 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 TSKSQ9UJT2 592 aa16.25■□□□□ 0.19
CAPN1-214ENST00000528165 PDE8AO60658 829 aa16.24■□□□□ 0.19
CAPN1-214ENST00000528165 LCA5LO95447 670 aa16.24■□□□□ 0.19
CAPN1-214ENST00000528165 HLFQ16534 295 aa16.24■□□□□ 0.19
CAPN1-214ENST00000528165 PDE4DQ08499 809 aa16.24■□□□□ 0.19
CAPN1-214ENST00000528165 DRP2Q13474 957 aa16.24■□□□□ 0.19
CAPN1-214ENST00000528165 CCDC178Q5BJE1 867 aa16.24■□□□□ 0.19
CAPN1-214ENST00000528165 MAATS1Q7Z4T9 603 aa16.24■□□□□ 0.19
CAPN1-214ENST00000528165 DOCK2Q92608 1830 aa16.24■□□□□ 0.19
CAPN1-214ENST00000528165 ZSCAN5CA6NGD5 496 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-214ENST00000528165 GOLGA6L10A6NI86 522 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 CALML3P27482 149 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 PFKFB3Q16875 520 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-214ENST00000528165 CEP85LQ5SZL2 805 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 CCDC121Q6ZUS5 278 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 WHAMMQ8TF30 809 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 PIK3R5Q8WYR1 880 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 GOLGA6L7A0A1B0GV03 622 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 ADAMTS3O15072 1205 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 BUB1O43683 1085 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 RASSF9O75901 435 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 NF2P35240 595 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 C1orf131Q8NDD1 294 aaKnown RBP16.23■□□□□ 0.19
CAPN1-214ENST00000528165 MMRN2Q9H8L6 949 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 SALL4Q9UJQ4 1053 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 COL18A1P39060 1754 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 MAGEB6P1A0A0J9YX57 407 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 SRRM3A6NNA2 597 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-214ENST00000528165 C21orf2O43822 256 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms