RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 TMTC2Q8N394 836 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 IL27Q8NEV9 243 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 AGBL1Q96MI9 1066 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 PURBQ96QR8 312 aaKnown RBP13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 UBA5Q9GZZ9 404 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 HOMER2Q9NSB8 354 aa13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 ZNFX1Q9P2E3 1918 aaKnown RBP13.44□□□□□ -0.26
CCDC90B-210ENST00000528149 GOLGA8AA7E2F4 631 aa13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 ZBTB43O43298 467 aa13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 PTPREP23469 700 aa13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 MAPK4P31152 587 aa13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 ASPRV1Q53RT3 343 aa13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 GJC2Q5T442 439 aaPredicted RBP13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 SNRNP48Q6IEG0 339 aaKnown RBP13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 SLC39A5Q6ZMH5 540 aa13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 FBXL16Q8N461 479 aa13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 TIFAQ96CG3 184 aa13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 SNX27Q96L92 541 aa13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 GAS2L1Q99501 681 aaPredicted RBP13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 LRFN3Q9BTN0 628 aa13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 PRR12Q9ULL5 1215 aa13.43□□□□□ -0.26
CCDC90B-210ENST00000528149 CD2BP2O95400 341 aaKnown RBP13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 LARGE1O95461 756 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 ITGB8P26012 769 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 ADORA2AP29274 412 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 STAT2P52630 851 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 GRB14Q14449 540 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 SNX17Q15036 470 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 RTN1Q16799 776 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 MUM1L1Q5H9M0 696 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 TRPV1Q8NER1 839 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 CTCFLQ8NI51 663 aaPredicted RBP13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 FGD4Q96M96 766 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 SLC38A10Q9HBR0 1119 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 HOXC10Q9NYD6 342 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 MAD2L2Q9UI95 211 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 REV3LO60673 3130 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 NID2Q14112 1375 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 PLXNA1Q9UIW2 1896 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 LRRC37A2A6NM11 1700 aa13.42□□□□□ -0.26
CCDC90B-210ENST00000528149 MSCO60682 206 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 PLEKHA8P1O95397 391 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 CALM1P0DP23 149 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 CALM2P0DP24 149 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 CALM3P0DP25 149 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 PTGS1P23219 599 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 CNGA1P29973 690 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 CYP2C19P33261 490 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 METAP2P50579 478 aaKnown RBP eCLIP13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 MAP2K5Q13163 448 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 STK3Q13188 491 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 CCDC85BQ15834 202 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 GPATCH4Q5T3I0 446 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 SYDE2Q5VT97 1194 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 MFSD14CQ5VZR4 134 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 ALYREFQ86V81 257 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 RIOX2Q8IUF8 465 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 ALDH8A1Q9H2A2 487 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 PRDM12Q9H4Q4 367 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 NCOA5Q9HCD5 579 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 CHD7Q9P2D1 2997 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 FEM1BQ9UK73 627 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 TPCN1Q9ULQ1 816 aa13.41□□□□□ -0.26
CCDC90B-210ENST00000528149 ASTN1O14525 1302 aa13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 PALM3A6NDB9 673 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 PDIA3P30101 505 aaKnown RBP13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 CDC27P30260 824 aa13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 KIF5BP33176 963 aa13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 STAT3P40763 770 aa13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 EVCP57679 992 aa13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 CCT2P78371 535 aaKnown RBP13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 ADGRE1Q14246 886 aa13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 ANKRD1Q15327 319 aa13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 PRAMEF19Q5SWL8 479 aa13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 FAM160B2Q86V87 743 aa13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 CCAR1Q8IX12 1150 aaKnown RBP13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 CMTR1Q8N1G2 835 aaKnown RBP13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 GTF3C2Q8WUA4 911 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 LENG1Q96BZ8 264 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 CWC22Q9HCG8 908 aaKnown RBP13.4□□□□□ -0.26
CCDC90B-210ENST00000528149 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 KLRF2D3W0D1 207 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 DHX16O60231 1041 aaKnown RBP13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 ST18O60284 1047 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 PPP1R11O60927 126 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 DTNBO60941 627 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 RCAN1P53805 252 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 ME3Q16798 604 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 ANO1Q5XXA6 986 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 BTNL9Q6UXG8 535 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 TMTC3Q6ZXV5 915 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 PRPF38AQ8NAV1 312 aaKnown RBP13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 FANCBQ8NB91 859 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 CHURC1Q8WUH1 139 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 PIBF1Q8WXW3 757 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 MAP3K14Q99558 947 aa13.39□□□□□ -0.27
CCDC90B-210ENST00000528149 EPHX3Q9H6B9 360 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms