RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 PPFIA3O75145 1194 aa20.57■□□□□ 0.88
NXF1-206ENST00000527902 LARGE1O95461 756 aa20.57■□□□□ 0.88
NXF1-206ENST00000527902 CCND3P30281 292 aaPredicted RBP20.57■□□□□ 0.88
NXF1-206ENST00000527902 MFSD14CQ5VZR4 134 aa20.57■□□□□ 0.88
NXF1-206ENST00000527902 ZNF467Q7Z7K2 595 aaPredicted RBP20.57■□□□□ 0.88
NXF1-206ENST00000527902 RGS22Q8NE09 1264 aa20.57■□□□□ 0.88
NXF1-206ENST00000527902 UPF2Q9HAU5 1272 aaKnown RBP20.57■□□□□ 0.88
NXF1-206ENST00000527902 V9GY48 417 aaPredicted RBP20.57■□□□□ 0.88
NXF1-206ENST00000527902 CCDC196A0A1B0GTZ2 297 aa20.56■□□□□ 0.88
NXF1-206ENST00000527902 POTEFA5A3E0 1075 aa20.56■□□□□ 0.88
NXF1-206ENST00000527902 SNAI1O95863 264 aaPredicted RBP20.56■□□□□ 0.88
NXF1-206ENST00000527902 CYBAP13498 195 aa20.56■□□□□ 0.88
NXF1-206ENST00000527902 SOX10P56693 466 aa20.56■□□□□ 0.88
NXF1-206ENST00000527902 GHRHRQ02643 423 aa20.56■□□□□ 0.88
NXF1-206ENST00000527902 PRAMEF19Q5SWL8 479 aa20.56■□□□□ 0.88
NXF1-206ENST00000527902 MAMDC4Q6UXC1 1216 aa20.56■□□□□ 0.88
NXF1-206ENST00000527902 SYTL5Q8TDW5 730 aaPredicted RBP20.56■□□□□ 0.88
NXF1-206ENST00000527902 GPKOWQ92917 476 aaPredicted RBP eCLIP20.56■□□□□ 0.882e-6■■■■□ 21.7
NXF1-206ENST00000527902 PHKBQ93100 1093 aa20.56■□□□□ 0.88
NXF1-206ENST00000527902 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.56■□□□□ 0.88
NXF1-206ENST00000527902 RNF208Q9H0X6 261 aa20.56■□□□□ 0.88
NXF1-206ENST00000527902 PAK6Q9NQU5 681 aaPredicted RBP20.56■□□□□ 0.88
NXF1-206ENST00000527902 RPTORQ8N122 1335 aa20.55■□□□□ 0.88
NXF1-206ENST00000527902 CAPN15O75808 1086 aa20.55■□□□□ 0.88
NXF1-206ENST00000527902 HSD17B4P51659 736 aa20.55■□□□□ 0.88
NXF1-206ENST00000527902 SCRN1Q12765 414 aa20.55■□□□□ 0.88
NXF1-206ENST00000527902 ANKRD1Q15327 319 aa20.55■□□□□ 0.88
NXF1-206ENST00000527902 WWC2Q6AWC2 1192 aa20.55■□□□□ 0.88
NXF1-206ENST00000527902 TYW1BQ6NUM6 668 aa20.55■□□□□ 0.88
NXF1-206ENST00000527902 SYNGAP1Q96PV0 1343 aa20.54■□□□□ 0.88
NXF1-206ENST00000527902 PFKFB2O60825 505 aa20.54■□□□□ 0.88
NXF1-206ENST00000527902 DTNBO60941 627 aa20.54■□□□□ 0.88
NXF1-206ENST00000527902 CFBP00751 764 aa20.54■□□□□ 0.88
NXF1-206ENST00000527902 IFNAR1P17181 557 aa20.54■□□□□ 0.88
NXF1-206ENST00000527902 ME3Q16798 604 aa20.54■□□□□ 0.88
NXF1-206ENST00000527902 ARMCX2Q7L311 632 aa20.54■□□□□ 0.88
NXF1-206ENST00000527902 HEATR3Q7Z4Q2 680 aa20.54■□□□□ 0.88
NXF1-206ENST00000527902 MCF2L2Q86YR7 1114 aa20.54■□□□□ 0.88
NXF1-206ENST00000527902 MSL3Q8N5Y2 521 aaKnown RBP20.54■□□□□ 0.88
NXF1-206ENST00000527902 HMX1Q9NP08 348 aaPredicted RBP20.54■□□□□ 0.88
NXF1-206ENST00000527902 HOXA13P31271 388 aaPredicted RBP20.53■□□□□ 0.88
NXF1-206ENST00000527902 ALDH5A1P51649 535 aaPredicted RBP20.53■□□□□ 0.88
NXF1-206ENST00000527902 TRAF1Q13077 416 aa20.53■□□□□ 0.88
NXF1-206ENST00000527902 PKN1Q16512 942 aa20.53■□□□□ 0.88
NXF1-206ENST00000527902 TAAR1Q96RJ0 339 aa20.53■□□□□ 0.88
NXF1-206ENST00000527902 KATNBL1Q9H079 304 aa20.53■□□□□ 0.88
NXF1-206ENST00000527902 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.53■□□□□ 0.88
NXF1-206ENST00000527902 PRPF3O43395 683 aaKnown RBP20.52■□□□□ 0.88
NXF1-206ENST00000527902 GJB1P08034 283 aa20.52■□□□□ 0.88
NXF1-206ENST00000527902 ZNF865P0CJ78 1059 aaPredicted RBP20.52■□□□□ 0.88
NXF1-206ENST00000527902 ST3GAL1Q11201 340 aa20.52■□□□□ 0.88
NXF1-206ENST00000527902 RABEP1Q15276 862 aa20.52■□□□□ 0.88
NXF1-206ENST00000527902 PFKFB3Q16875 520 aaPredicted RBP20.52■□□□□ 0.88
NXF1-206ENST00000527902 NECAB1Q8N987 351 aa20.52■□□□□ 0.88
NXF1-206ENST00000527902 SHISA4Q96DD7 197 aa20.52■□□□□ 0.88
NXF1-206ENST00000527902 DEFB118Q96PH6 123 aa20.52■□□□□ 0.88
NXF1-206ENST00000527902 TMEM106CQ9BVX2 250 aa20.52■□□□□ 0.88
NXF1-206ENST00000527902 SLC26A6Q9BXS9 759 aa20.52■□□□□ 0.88
NXF1-206ENST00000527902 MAF1Q9H063 256 aa20.52■□□□□ 0.88
NXF1-206ENST00000527902 SLKQ9H2G2 1235 aaPredicted RBP20.52■□□□□ 0.88
NXF1-206ENST00000527902 KIAA1217Q5T5P2 1943 aa20.51■□□□□ 0.87
NXF1-206ENST00000527902 STXBP3O00186 592 aa20.51■□□□□ 0.87
NXF1-206ENST00000527902 MORC4Q8TE76 937 aa20.51■□□□□ 0.87
NXF1-206ENST00000527902 RNF26Q9BY78 433 aaPredicted RBP20.51■□□□□ 0.87
NXF1-206ENST00000527902 ADD3Q9UEY8 706 aaKnown RBP20.51■□□□□ 0.87
NXF1-206ENST00000527902 ASB14A6NK59 587 aa20.5■□□□□ 0.87
NXF1-206ENST00000527902 GCOM1H8Y6P7 765 aaPredicted RBP20.5■□□□□ 0.87
NXF1-206ENST00000527902 MEIS2O14770 477 aa20.5■□□□□ 0.87
NXF1-206ENST00000527902 CTDNEP1O95476 244 aa20.5■□□□□ 0.87
NXF1-206ENST00000527902 POLR2MP0CAP2 368 aa20.5■□□□□ 0.87
NXF1-206ENST00000527902 SCG2P13521 617 aa20.5■□□□□ 0.87
NXF1-206ENST00000527902 EN2P19622 333 aaPredicted RBP20.5■□□□□ 0.87
NXF1-206ENST00000527902 EDNRBP24530 442 aa20.5■□□□□ 0.87
NXF1-206ENST00000527902 LHX8Q68G74 356 aa20.5■□□□□ 0.87
NXF1-206ENST00000527902 USP17L6PQ6QN14 398 aa20.5■□□□□ 0.87
NXF1-206ENST00000527902 DNERQ8NFT8 737 aa20.5■□□□□ 0.87
NXF1-206ENST00000527902 U2AF1L4Q8WU68 220 aaKnown RBP20.5■□□□□ 0.87
NXF1-206ENST00000527902 GTF3C6Q969F1 213 aa20.5■□□□□ 0.87
NXF1-206ENST00000527902 BARHL2Q9NY43 387 aa20.5■□□□□ 0.87
NXF1-206ENST00000527902 MKI67P46013 3256 aaKnown RBP20.49■□□□□ 0.87
NXF1-206ENST00000527902 CPLX1O14810 134 aa20.49■□□□□ 0.87
NXF1-206ENST00000527902 CD2BP2O95400 341 aaKnown RBP20.49■□□□□ 0.87
NXF1-206ENST00000527902 CNGA1P29973 690 aa20.49■□□□□ 0.87
NXF1-206ENST00000527902 GJA8P48165 433 aa20.49■□□□□ 0.87
NXF1-206ENST00000527902 RMDN3Q96TC7 470 aa20.49■□□□□ 0.87
NXF1-206ENST00000527902 CRISPLD2Q9H0B8 497 aa20.49■□□□□ 0.87
NXF1-206ENST00000527902 MAP3K20Q9NYL2 800 aaKnown RBP20.49■□□□□ 0.87
NXF1-206ENST00000527902 NRBP1Q9UHY1 535 aa20.49■□□□□ 0.87
NXF1-206ENST00000527902 ZHX1Q9UKY1 873 aaPredicted RBP20.49■□□□□ 0.87
NXF1-206ENST00000527902 CNPY2Q9Y2B0 182 aa20.49■□□□□ 0.87
NXF1-206ENST00000527902 SEPT4O43236 478 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 ADCY6O43306 1168 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 SGPL1O95470 568 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 NAPAP54920 295 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 ACVR2BQ13705 512 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 ANO1Q5XXA6 986 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 PPP1R18Q6NYC8 613 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 EEPD1Q7L9B9 569 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 FCHSD1Q86WN1 690 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 FBXO16Q8IX29 292 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms