RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 STARD7Q9NQZ5 370 aa18.08■□□□□ 0.48
CAPN1-213ENST00000527897 BAZ2BQ9UIF8 2168 aaKnown RBP18.08■□□□□ 0.48
CAPN1-213ENST00000527897 PALM3A6NDB9 673 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-213ENST00000527897 DYNC1LI2O43237 492 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-213ENST00000527897 PQBP1O60828 265 aaKnown RBP18.07■□□□□ 0.48
CAPN1-213ENST00000527897 SLC34A2O95436 690 aa18.07■□□□□ 0.48
CAPN1-213ENST00000527897 FXR1P51114 621 aaKnown RBP eCLIP18.07■□□□□ 0.48
CAPN1-213ENST00000527897 GJA9P57773 515 aa18.07■□□□□ 0.48
CAPN1-213ENST00000527897 PCSK9Q8NBP7 692 aaKnown RBP18.07■□□□□ 0.48
CAPN1-213ENST00000527897 KLHDC9Q8NEP7 349 aa18.07■□□□□ 0.48
CAPN1-213ENST00000527897 IGDCC4Q8TDY8 1250 aa18.07■□□□□ 0.48
CAPN1-213ENST00000527897 PIBF1Q8WXW3 757 aa18.07■□□□□ 0.48
CAPN1-213ENST00000527897 MPHOSPH6Q99547 160 aaKnown RBP18.07■□□□□ 0.48
CAPN1-213ENST00000527897 GDF15Q99988 308 aa18.07■□□□□ 0.48
CAPN1-213ENST00000527897 MYL10Q9BUA6 226 aa18.07■□□□□ 0.48
CAPN1-213ENST00000527897 AP5M1Q9H0R1 490 aa18.07■□□□□ 0.48
CAPN1-213ENST00000527897 PRO3102Q9H379 93 aa18.07■□□□□ 0.48
CAPN1-213ENST00000527897 MRPL11Q9Y3B7 192 aaKnown RBP18.07■□□□□ 0.48
CAPN1-213ENST00000527897 MOXD2PA6NHM9 499 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 CFBP00751 764 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 ASGR1P07306 291 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 SMPD1P17405 629 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 MCM5P33992 734 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 TLE2Q04725 743 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 NECTIN1Q15223 517 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 TMEM63BQ5T3F8 832 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 TAPT1Q6NXT6 567 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 MCF2L2Q86YR7 1114 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 GLT1D1Q96MS3 346 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 AMNQ9BXJ7 453 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 LRRC2Q9BYS8 371 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 UPF3AQ9H1J1 476 aaKnown RBP18.06■□□□□ 0.48
CAPN1-213ENST00000527897 LY9Q9HBG7 655 aa18.06■□□□□ 0.48
CAPN1-213ENST00000527897 CCDC69A6NI79 296 aa18.05■□□□□ 0.48
CAPN1-213ENST00000527897 B4DLN1 442 aa18.05■□□□□ 0.48
CAPN1-213ENST00000527897 ZBTB5O15062 677 aa18.05■□□□□ 0.48
CAPN1-213ENST00000527897 CST5P28325 142 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-213ENST00000527897 MRPL12P52815 198 aaKnown RBP18.05■□□□□ 0.48
CAPN1-213ENST00000527897 TROAPQ12815 778 aa18.05■□□□□ 0.48
CAPN1-213ENST00000527897 COL9A3Q14050 684 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-213ENST00000527897 SNX17Q15036 470 aa18.05■□□□□ 0.48
CAPN1-213ENST00000527897 RNF20Q5VTR2 975 aa18.05■□□□□ 0.48
CAPN1-213ENST00000527897 IQSEC1Q6DN90 963 aa18.05■□□□□ 0.48
CAPN1-213ENST00000527897 ZNF654Q8IZM8 581 aa18.05■□□□□ 0.48
CAPN1-213ENST00000527897 MORC4Q8TE76 937 aa18.05■□□□□ 0.48
CAPN1-213ENST00000527897 PIGSQ96S52 555 aa18.05■□□□□ 0.48
CAPN1-213ENST00000527897 WDR11Q9BZH6 1224 aa18.05■□□□□ 0.48
CAPN1-213ENST00000527897 GNEQ9Y223 722 aaKnown RBP18.05■□□□□ 0.48
CAPN1-213ENST00000527897 PCDHA1Q9Y5I3 950 aa18.05■□□□□ 0.48
CAPN1-213ENST00000527897 PPP1R11O60927 126 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-213ENST00000527897 FSCN1Q16658 493 aaKnown RBP18.04■□□□□ 0.48
CAPN1-213ENST00000527897 CCSAPQ6IQ19 270 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-213ENST00000527897 SH3RF1Q7Z6J0 888 aa18.04■□□□□ 0.48
CAPN1-213ENST00000527897 RAB11FIP4Q86YS3 637 aa18.04■□□□□ 0.48
CAPN1-213ENST00000527897 RGS22Q8NE09 1264 aa18.04■□□□□ 0.48
CAPN1-213ENST00000527897 DNERQ8NFT8 737 aa18.04■□□□□ 0.48
CAPN1-213ENST00000527897 CTCFLQ8NI51 663 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-213ENST00000527897 TAAR1Q96RJ0 339 aa18.04■□□□□ 0.48
CAPN1-213ENST00000527897 LOC102724159A0A0B4J2E5 919 aa18.03■□□□□ 0.48
CAPN1-213ENST00000527897 SH2B2O14492 632 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-213ENST00000527897 RXRAP19793 462 aa18.03■□□□□ 0.48
CAPN1-213ENST00000527897 BMP8BP34820 402 aa18.03■□□□□ 0.48
CAPN1-213ENST00000527897 PWP2Q15269 919 aaKnown RBP18.03■□□□□ 0.48
CAPN1-213ENST00000527897 SLC35G1Q2M3R5 365 aa18.03■□□□□ 0.48
CAPN1-213ENST00000527897 C1orf53Q5VUE5 145 aa18.03■□□□□ 0.48
CAPN1-213ENST00000527897 SYTL5Q8TDW5 730 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-213ENST00000527897 TMEM87BQ96K49 555 aa18.03■□□□□ 0.48
CAPN1-213ENST00000527897 PDLIM7Q9NR12 457 aa18.03■□□□□ 0.48
CAPN1-213ENST00000527897 COL20A1Q9P218 1284 aa18.03■□□□□ 0.48
CAPN1-213ENST00000527897 TRIM43BA6NCK2 446 aa18.02■□□□□ 0.48
CAPN1-213ENST00000527897 CYTH3O43739 400 aa18.02■□□□□ 0.48
CAPN1-213ENST00000527897 ZEB2O60315 1214 aa18.02■□□□□ 0.48
CAPN1-213ENST00000527897 CLTBP09497 229 aa18.02■□□□□ 0.48
CAPN1-213ENST00000527897 EIF2AK2P19525 551 aaKnown RBP18.02■□□□□ 0.48
CAPN1-213ENST00000527897 KIF5BP33176 963 aa18.02■□□□□ 0.48
CAPN1-213ENST00000527897 PPP2R5BQ15173 497 aa18.02■□□□□ 0.48
CAPN1-213ENST00000527897 ARHGEF16Q5VV41 709 aa18.02■□□□□ 0.48
CAPN1-213ENST00000527897 CXCL17Q6UXB2 119 aa18.02■□□□□ 0.48
CAPN1-213ENST00000527897 NSUN6Q8TEA1 469 aaKnown RBP18.02■□□□□ 0.48
CAPN1-213ENST00000527897 TRIM43Q96BQ3 446 aaPredicted RBP18.02■□□□□ 0.48
CAPN1-213ENST00000527897 MTMR8Q96EF0 704 aa18.02■□□□□ 0.48
CAPN1-213ENST00000527897 RMDN3Q96TC7 470 aa18.02■□□□□ 0.48
CAPN1-213ENST00000527897 RIOX1Q9H6W3 641 aa18.02■□□□□ 0.48
CAPN1-213ENST00000527897 LTBP2Q14767 1821 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 A0A0U1RQG5 324 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-213ENST00000527897 A0A1W2PPC1 479 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 DCDC2CA8MYV0 355 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 CTAGE5O15320 804 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 DDAH1O94760 285 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 EDNRBP24530 442 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 HOXA13P31271 388 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-213ENST00000527897 DUSP28Q4G0W2 176 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 TDHQ8IZJ6 230 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 TMTC2Q8N394 836 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 OR6J1Q8NGC5 347 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 BADQ92934 168 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 TCEANC2Q96MN5 208 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 NEK1Q96PY6 1258 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 TMEM39AQ9NV64 488 aa18.01■□□□□ 0.47
CAPN1-213ENST00000527897 ELP1O95163 1332 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms