RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 DDAH1O94760 285 aa11.87□□□□□ -0.51
CTNND1-217ENST00000527599 ZSCAN22P10073 491 aaPredicted RBP11.87□□□□□ -0.51
CTNND1-217ENST00000527599 LDHDQ86WU2 507 aa11.87□□□□□ -0.51
CTNND1-217ENST00000527599 IGDCC3Q8IVU1 814 aa11.87□□□□□ -0.51
CTNND1-217ENST00000527599 HNRNPLLQ8WVV9 542 aaKnown RBP11.87□□□□□ -0.51
CTNND1-217ENST00000527599 PPP1R14AQ96A00 147 aa11.87□□□□□ -0.51
CTNND1-217ENST00000527599 IRF2BPLQ9H1B7 796 aa11.87□□□□□ -0.51
CTNND1-217ENST00000527599 EPB41L4AQ9HCS5 686 aaPredicted RBP11.87□□□□□ -0.51
CTNND1-217ENST00000527599 KCTD3Q9Y597 815 aa11.87□□□□□ -0.51
CTNND1-217ENST00000527599 NPHP3-ACAD11A0A0J9YXS1 232 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 NOP56O00567 594 aaKnown RBP11.86□□□□□ -0.51
CTNND1-217ENST00000527599 NUAK1O60285 661 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 GJB6O95452 261 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 CYBBP04839 570 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 ITGAVP06756 1048 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 NAT2P11245 290 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 PLS3P13797 630 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 PAMP19021 973 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 MAPKAPK2P49137 400 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 FXNQ16595 210 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 CIAPIN1Q6FI81 312 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 POMZP3Q6PJE2 187 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 PAQR3Q6TCH7 311 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 CELF2-AS1Q8N7Q2 184 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 MZB1Q8WU39 189 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 MTA3Q9BTC8 594 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 CNOT6Q9ULM6 557 aaKnown RBP11.86□□□□□ -0.51
CTNND1-217ENST00000527599 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 PCDHA5Q9Y5H7 936 aa11.86□□□□□ -0.51
CTNND1-217ENST00000527599 IRS4O14654 1257 aaPredicted RBP11.85□□□□□ -0.51
CTNND1-217ENST00000527599 THBDP07204 575 aa11.85□□□□□ -0.51
CTNND1-217ENST00000527599 GLI4P10075 376 aa11.85□□□□□ -0.51
CTNND1-217ENST00000527599 NCKAP1LP55160 1127 aa11.85□□□□□ -0.51
CTNND1-217ENST00000527599 NR1I3Q14994 352 aa11.85□□□□□ -0.51
CTNND1-217ENST00000527599 FBLN7Q53RD9 439 aa11.85□□□□□ -0.51
CTNND1-217ENST00000527599 OLFML2BQ68BL8 750 aa11.85□□□□□ -0.51
CTNND1-217ENST00000527599 TMEFF1Q8IYR6 380 aa11.85□□□□□ -0.51
CTNND1-217ENST00000527599 BTN2A2Q8WVV5 523 aa11.85□□□□□ -0.51
CTNND1-217ENST00000527599 SIGLEC10Q96LC7 697 aa11.85□□□□□ -0.51
CTNND1-217ENST00000527599 NKX2-4Q9H2Z4 354 aa11.85□□□□□ -0.51
CTNND1-217ENST00000527599 CYP26B1Q9NR63 512 aa11.85□□□□□ -0.51
CTNND1-217ENST00000527599 GULP1Q9UBP9 304 aa11.85□□□□□ -0.51
CTNND1-217ENST00000527599 C7orf72A4D263 438 aa11.84□□□□□ -0.51
CTNND1-217ENST00000527599 ARNTLO00327 626 aa11.84□□□□□ -0.51
CTNND1-217ENST00000527599 SV2CQ496J9 727 aa11.84□□□□□ -0.51
CTNND1-217ENST00000527599 ZNF227Q86WZ6 799 aa11.84□□□□□ -0.51
CTNND1-217ENST00000527599 SIAH1Q8IUQ4 282 aa11.84□□□□□ -0.51
CTNND1-217ENST00000527599 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
CTNND1-217ENST00000527599 IRS2Q9Y4H2 1338 aa11.84□□□□□ -0.51
CTNND1-217ENST00000527599 ZC3H12DA2A288 527 aaKnown RBP11.83□□□□□ -0.52
CTNND1-217ENST00000527599 PI3P19957 117 aa11.83□□□□□ -0.52
CTNND1-217ENST00000527599 TMEM62Q0P6H9 643 aa11.83□□□□□ -0.52
CTNND1-217ENST00000527599 ZC3H14Q6PJT7 736 aaKnown RBP11.83□□□□□ -0.52
CTNND1-217ENST00000527599 NPLOC4Q8TAT6 608 aa11.83□□□□□ -0.52
CTNND1-217ENST00000527599 FRS2Q8WU20 508 aa11.83□□□□□ -0.52
CTNND1-217ENST00000527599 RXFP1Q9HBX9 757 aa11.83□□□□□ -0.52
CTNND1-217ENST00000527599 A0A1W2PQJ5 194 aa11.82□□□□□ -0.52
CTNND1-217ENST00000527599 KLF4O43474 513 aa11.82□□□□□ -0.52
CTNND1-217ENST00000527599 FBLN1P23142 703 aa11.82□□□□□ -0.52
CTNND1-217ENST00000527599 ZNF200P98182 395 aaPredicted RBP11.82□□□□□ -0.52
CTNND1-217ENST00000527599 SF1Q15637 639 aaKnown RBP11.82□□□□□ -0.52
CTNND1-217ENST00000527599 INF2Q27J81 1249 aa11.82□□□□□ -0.52
CTNND1-217ENST00000527599 ANKS3Q6ZW76 656 aa11.82□□□□□ -0.52
CTNND1-217ENST00000527599 DPF3Q92784 378 aa11.82□□□□□ -0.52
CTNND1-217ENST00000527599 MMP19Q99542 508 aa11.82□□□□□ -0.52
CTNND1-217ENST00000527599 ST7Q9NRC1 585 aa11.82□□□□□ -0.52
CTNND1-217ENST00000527599 IRAK3Q9Y616 596 aa11.82□□□□□ -0.52
CTNND1-217ENST00000527599 F8W031 263 aaPredicted RBP11.81□□□□□ -0.52
CTNND1-217ENST00000527599 CAPNS1P04632 268 aa11.81□□□□□ -0.52
CTNND1-217ENST00000527599 PRR5P85299 388 aa11.81□□□□□ -0.52
CTNND1-217ENST00000527599 LZTR1Q8N653 840 aa11.81□□□□□ -0.52
CTNND1-217ENST00000527599 LCE4AQ5TA78 99 aa11.8□□□□□ -0.52
CTNND1-217ENST00000527599 TMEFF2Q9UIK5 374 aaPredicted RBP11.8□□□□□ -0.52
CTNND1-217ENST00000527599 TRBV23OR9-2A0A075B6M9 112 aa11.79□□□□□ -0.52
CTNND1-217ENST00000527599 ZNF385BQ569K4 471 aa11.79□□□□□ -0.52
CTNND1-217ENST00000527599 CCDC103Q8IW40 242 aa11.79□□□□□ -0.52
CTNND1-217ENST00000527599 KREMEN2Q8NCW0 462 aa11.79□□□□□ -0.52
CTNND1-217ENST00000527599 DACT3Q96B18 629 aaPredicted RBP11.79□□□□□ -0.52
CTNND1-217ENST00000527599 ADAMTS20P59510 1910 aa11.78□□□□□ -0.52
CTNND1-217ENST00000527599 IGFBP6P24592 240 aaPredicted RBP11.78□□□□□ -0.52
CTNND1-217ENST00000527599 SLC10A6Q3KNW5 377 aa11.78□□□□□ -0.52
CTNND1-217ENST00000527599 LRP2BPQ9P2M1 347 aa11.78□□□□□ -0.52
CTNND1-217ENST00000527599 NPHS1O60500 1241 aa11.77□□□□□ -0.53
CTNND1-217ENST00000527599 DDR2Q16832 855 aa11.77□□□□□ -0.53
CTNND1-217ENST00000527599 PRSS53Q2L4Q9 553 aa11.77□□□□□ -0.53
CTNND1-217ENST00000527599 FAM129CQ86XR2 697 aa11.77□□□□□ -0.53
CTNND1-217ENST00000527599 PLEKHO2Q8TD55 490 aa11.77□□□□□ -0.53
CTNND1-217ENST00000527599 BCAS3Q9H6U6 928 aa11.77□□□□□ -0.53
CTNND1-217ENST00000527599 BUB1BO60566 1050 aaPredicted RBP11.76□□□□□ -0.53
CTNND1-217ENST00000527599 SCG5P05408 212 aa11.76□□□□□ -0.53
CTNND1-217ENST00000527599 HOXC12P31275 282 aa11.76□□□□□ -0.53
CTNND1-217ENST00000527599 GRIA2P42262 883 aa11.76□□□□□ -0.53
CTNND1-217ENST00000527599 NAALADL2Q58DX5 795 aa11.76□□□□□ -0.53
CTNND1-217ENST00000527599 DENND5AQ6IQ26 1287 aa11.76□□□□□ -0.53
CTNND1-217ENST00000527599 EEPD1Q7L9B9 569 aa11.76□□□□□ -0.53
CTNND1-217ENST00000527599 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.76□□□□□ -0.53
CTNND1-217ENST00000527599 FUCA1P04066 466 aa11.75□□□□□ -0.53
CTNND1-217ENST00000527599 SNRPB2P08579 225 aaKnown RBP11.75□□□□□ -0.53
CTNND1-217ENST00000527599 ECI1P42126 302 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms