RNA–Protein interactions for RNA: ENST00000527528.1

AP003066.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003066.1, Length 1,647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003066.1-201ENST00000527528 NYAP2Q9P242 653 aa8.8□□□□□ -1
AP003066.1-201ENST00000527528 FBXO40Q9UH90 709 aa8.8□□□□□ -1
AP003066.1-201ENST00000527528 SYNRGQ9UMZ2 1314 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.79□□□□□ -1
AP003066.1-201ENST00000527528 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.79□□□□□ -1
AP003066.1-201ENST00000527528 MINDY4BA8MYZ0 360 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 F5H6K3 240 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 ADAMTS4O75173 837 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 DUSP11O75319 330 aaKnown RBP8.79□□□□□ -1
AP003066.1-201ENST00000527528 RGS20O76081 388 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 NDUFB10O96000 172 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 GNAT2P19087 354 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 PTPN5P54829 565 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 KLRC3Q07444 240 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 LRRFIP1Q32MZ4 808 aaKnown RBP8.79□□□□□ -1
AP003066.1-201ENST00000527528 MAMDC4Q6UXC1 1216 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 THSD4Q6ZMP0 1018 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 ZNF444Q8N0Y2 327 aaPredicted RBP8.79□□□□□ -1
AP003066.1-201ENST00000527528 CPXCR1Q8N123 301 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 ANKRD35Q8N283 1001 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 KCNV2Q8TDN2 545 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 STRBPQ96SI9 672 aaKnown RBP8.79□□□□□ -1
AP003066.1-201ENST00000527528 NUP88Q99567 741 aaPredicted RBP8.79□□□□□ -1
AP003066.1-201ENST00000527528 TTYH1Q9H313 450 aaPredicted RBP8.79□□□□□ -1
AP003066.1-201ENST00000527528 ECHDC1Q9NTX5 307 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 SYNPO2Q9UMS6 1093 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 DNAH12Q6ZR08 3092 aa8.79□□□□□ -1
AP003066.1-201ENST00000527528 ELP1O95163 1332 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 HMGB1P1B2RPK0 211 aaPredicted RBP8.78□□□□□ -1
AP003066.1-201ENST00000527528 SMIM22K7EJ46 135 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 ATP2A1O14983 1001 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 TLR3O15455 904 aaKnown RBP8.78□□□□□ -1
AP003066.1-201ENST00000527528 TIMP1P01033 207 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 ZFYP08048 801 aaPredicted RBP8.78□□□□□ -1
AP003066.1-201ENST00000527528 SLC3A2P08195 630 aaKnown RBP8.78□□□□□ -1
AP003066.1-201ENST00000527528 C6orf222P0C671 652 aaPredicted RBP8.78□□□□□ -1
AP003066.1-201ENST00000527528 RASA1P20936 1047 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 ITGB8P26012 769 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 TDO2P48775 406 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 OAZ1P54368 228 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 FAAP100Q0VG06 881 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 PPIGQ13427 754 aaKnown RBP eCLIP8.78□□□□□ -1
AP003066.1-201ENST00000527528 HDAC1Q13547 482 aaPredicted RBP8.78□□□□□ -1
AP003066.1-201ENST00000527528 KCNA10Q16322 511 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 LAPTM4BQ86VI4 370 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 STK11IPQ8N1F8 1099 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 KLHDC9Q8NEP7 349 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 CHST13Q8NET6 341 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 KIFC2Q96AC6 838 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 LENG1Q96BZ8 264 aaPredicted RBP8.78□□□□□ -1
AP003066.1-201ENST00000527528 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.78□□□□□ -1
AP003066.1-201ENST00000527528 NACAP1Q9BZK3 213 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 CLIP2Q9UDT6 1046 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 FEM1BQ9UK73 627 aa8.78□□□□□ -1
AP003066.1-201ENST00000527528 BAZ2AQ9UIF9 1905 aaKnown RBP8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 DNAJC25-GNG10A0A024R161 153 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 GSG1L2A8MUP6 293 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 SNAI1O95863 264 aaPredicted RBP8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 FDX1P10109 184 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 CST5P28325 142 aaPredicted RBP8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 EPHB4P54760 987 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 ACVR2BQ13705 512 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 SETDB1Q15047 1291 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 CCDC96Q2M329 555 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 TMEM199Q8N511 208 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 KBTBD3Q8NAB2 608 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 APPBP2Q92624 585 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 ABHD16BQ9H3Z7 469 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 GEMIN8Q9NWZ8 242 aaKnown RBP8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 ISY1Q9ULR0 285 aaKnown RBP8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 RIPK3Q9Y572 518 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 PARP14Q460N5 1801 aa8.77□□□□□ -1.01
AP003066.1-201ENST00000527528 RNF113AO15541 343 aaKnown RBP8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 TTLL1O95922 423 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 CHGBP05060 677 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 DNAJB2P25686 324 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 PDE4BQ07343 736 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 MYBPC2Q14324 1141 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 CCDC144BQ3MJ40 725 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 GNASQ5JWF2 1037 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 MFSD5Q6N075 450 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 PSRC1Q6PGN9 363 aaPredicted RBP8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 CCDC129Q6ZRS4 1044 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 GMCL1P1Q8NEA9 526 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 ANKK1Q8NFD2 765 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 MKL1Q969V6 931 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 TIFAQ96CG3 184 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 MTIF3Q9H2K0 278 aaKnown RBP8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 SLC38A10Q9HBR0 1119 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 RAVER2Q9HCJ3 691 aaKnown RBP8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 ZNFX1Q9P2E3 1918 aaKnown RBP8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 PLXNA1Q9UIW2 1896 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 COL11A1P12107 1806 aaPredicted RBP8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 IGKV6D-41A0A0C4DH26 115 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 ARVCFO00192 962 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 GPAA1O43292 621 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 SMARCA5O60264 1052 aaPredicted RBP8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 ASGR1P07306 291 aa8.76□□□□□ -1.01
AP003066.1-201ENST00000527528 TSPY3P0CV98 308 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms