RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 RBM28Q9NW13 759 aaKnown RBP15.5■□□□□ 0.07
CAPN1-209ENST00000527469 MYH6P13533 1939 aa15.5■□□□□ 0.07
CAPN1-209ENST00000527469 TNRC18O15417 2968 aaPredicted RBP15.5■□□□□ 0.07
CAPN1-209ENST00000527469 LOC102724159A0A0B4J2E5 919 aa15.49■□□□□ 0.07
CAPN1-209ENST00000527469 DNM1LO00429 736 aa15.49■□□□□ 0.07
CAPN1-209ENST00000527469 ZNF865P0CJ78 1059 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-209ENST00000527469 CPA1P15085 419 aa15.49■□□□□ 0.07
CAPN1-209ENST00000527469 ALDH5A1P51649 535 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-209ENST00000527469 PWP2Q15269 919 aaKnown RBP15.49■□□□□ 0.07
CAPN1-209ENST00000527469 RTN1Q16799 776 aa15.49■□□□□ 0.07
CAPN1-209ENST00000527469 CCDC144BQ3MJ40 725 aa15.49■□□□□ 0.07
CAPN1-209ENST00000527469 APOA5Q6Q788 366 aa15.49■□□□□ 0.07
CAPN1-209ENST00000527469 Q6ZUG5 572 aa15.49■□□□□ 0.07
CAPN1-209ENST00000527469 EEPD1Q7L9B9 569 aa15.49■□□□□ 0.07
CAPN1-209ENST00000527469 UBE2Q1Q7Z7E8 422 aa15.49■□□□□ 0.07
CAPN1-209ENST00000527469 MTMR8Q96EF0 704 aa15.49■□□□□ 0.07
CAPN1-209ENST00000527469 PURBQ96QR8 312 aaKnown RBP15.49■□□□□ 0.07
CAPN1-209ENST00000527469 NR2E3Q9Y5X4 410 aa15.49■□□□□ 0.07
CAPN1-209ENST00000527469 CYP46A1Q9Y6A2 500 aa15.49■□□□□ 0.07
CAPN1-209ENST00000527469 BAZ2BQ9UIF8 2168 aaKnown RBP15.48■□□□□ 0.07
CAPN1-209ENST00000527469 GOLGA8AA7E2F4 631 aa15.48■□□□□ 0.07
CAPN1-209ENST00000527469 GOLGA8BA8MQT2 603 aa15.48■□□□□ 0.07
CAPN1-209ENST00000527469 CYTH3O43739 400 aa15.48■□□□□ 0.07
CAPN1-209ENST00000527469 EVI5O60447 810 aa15.48■□□□□ 0.07
CAPN1-209ENST00000527469 PLEKHA8P1O95397 391 aa15.48■□□□□ 0.07
CAPN1-209ENST00000527469 RPS6KB1P23443 525 aa15.48■□□□□ 0.07
CAPN1-209ENST00000527469 SMARCA1P28370 1054 aa15.48■□□□□ 0.07
CAPN1-209ENST00000527469 GJC2Q5T442 439 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-209ENST00000527469 CCDC82Q8N4S0 544 aa15.48■□□□□ 0.07
CAPN1-209ENST00000527469 DNERQ8NFT8 737 aa15.48■□□□□ 0.07
CAPN1-209ENST00000527469 NSUN6Q8TEA1 469 aaKnown RBP15.48■□□□□ 0.07
CAPN1-209ENST00000527469 BRF1Q92994 677 aa15.48■□□□□ 0.07
CAPN1-209ENST00000527469 VTA1Q9NP79 307 aa15.48■□□□□ 0.07
CAPN1-209ENST00000527469 SMCHD1A6NHR9 2005 aa15.48■□□□□ 0.07
CAPN1-209ENST00000527469 CCDC196A0A1B0GTZ2 297 aa15.47■□□□□ 0.07
CAPN1-209ENST00000527469 PPP1R11O60927 126 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-209ENST00000527469 PGK1P00558 417 aa15.47■□□□□ 0.07
CAPN1-209ENST00000527469 TNFAIP2Q03169 654 aa15.47■□□□□ 0.07
CAPN1-209ENST00000527469 ARHGEF16Q5VV41 709 aa15.47■□□□□ 0.07
CAPN1-209ENST00000527469 TMTC3Q6ZXV5 915 aa15.47■□□□□ 0.07
CAPN1-209ENST00000527469 FBXO16Q8IX29 292 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-209ENST00000527469 CMTR1Q8N1G2 835 aaKnown RBP15.47■□□□□ 0.07
CAPN1-209ENST00000527469 SRBD1Q8N5C6 995 aaKnown RBP15.47■□□□□ 0.07
CAPN1-209ENST00000527469 SYTL5Q8TDW5 730 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-209ENST00000527469 LENG1Q96BZ8 264 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-209ENST00000527469 RMDN3Q96TC7 470 aa15.47■□□□□ 0.07
CAPN1-209ENST00000527469 SENP6Q9GZR1 1112 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-209ENST00000527469 BRPF3Q9ULD4 1205 aa15.47■□□□□ 0.07
CAPN1-209ENST00000527469 MCM3APO60318 1980 aa15.46■□□□□ 0.07
CAPN1-209ENST00000527469 GCOM1H8Y6P7 765 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-209ENST00000527469 DUSP11O75319 330 aaKnown RBP15.46■□□□□ 0.07
CAPN1-209ENST00000527469 C6orf222P0C671 652 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-209ENST00000527469 POLR2MP0CAP2 368 aa15.46■□□□□ 0.07
CAPN1-209ENST00000527469 METAP2P50579 478 aaKnown RBP eCLIP15.46■□□□□ 0.073e-8■■■■■ 34.2
CAPN1-209ENST00000527469 APOBRQ0VD83 1088 aa15.46■□□□□ 0.07
CAPN1-209ENST00000527469 LRRC41Q15345 812 aa15.46■□□□□ 0.07
CAPN1-209ENST00000527469 SLC35G1Q2M3R5 365 aa15.46■□□□□ 0.07
CAPN1-209ENST00000527469 RUFY3Q7L099 469 aa15.46■□□□□ 0.07
CAPN1-209ENST00000527469 CUL5Q93034 780 aa15.46■□□□□ 0.07
CAPN1-209ENST00000527469 AP5M1Q9H0R1 490 aa15.46■□□□□ 0.07
CAPN1-209ENST00000527469 MAP3K20Q9NYL2 800 aaKnown RBP15.46■□□□□ 0.07
CAPN1-209ENST00000527469 DDX49Q9Y6V7 483 aaKnown RBP15.46■□□□□ 0.07
CAPN1-209ENST00000527469 ASTN1O14525 1302 aa15.45■□□□□ 0.06
CAPN1-209ENST00000527469 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
CAPN1-209ENST00000527469 EIF2AK2P19525 551 aaKnown RBP15.45■□□□□ 0.06
CAPN1-209ENST00000527469 HOXA13P31271 388 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-209ENST00000527469 ADCYAP1R1P41586 468 aa15.45■□□□□ 0.06
CAPN1-209ENST00000527469 MNX1P50219 401 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-209ENST00000527469 RCAN1P53805 252 aa15.45■□□□□ 0.06
CAPN1-209ENST00000527469 PPP2R5BQ15173 497 aa15.45■□□□□ 0.06
CAPN1-209ENST00000527469 PRPF38BQ5VTL8 546 aaKnown RBP15.45■□□□□ 0.06
CAPN1-209ENST00000527469 IQSEC1Q6DN90 963 aa15.45■□□□□ 0.06
CAPN1-209ENST00000527469 HEATR3Q7Z4Q2 680 aa15.45■□□□□ 0.06
CAPN1-209ENST00000527469 SAMD3Q8N6K7 520 aa15.45■□□□□ 0.06
CAPN1-209ENST00000527469 MORC4Q8TE76 937 aa15.45■□□□□ 0.06
CAPN1-209ENST00000527469 TBC1D5Q92609 795 aa15.45■□□□□ 0.06
CAPN1-209ENST00000527469 FRMPD3Q5JV73 1810 aa15.45■□□□□ 0.06
CAPN1-209ENST00000527469 hCG_1642624A0A1W2PR95 340 aa15.44■□□□□ 0.06
CAPN1-209ENST00000527469 ATN1P54259 1190 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-209ENST00000527469 FCHSD1Q86WN1 690 aa15.44■□□□□ 0.06
CAPN1-209ENST00000527469 PCSK9Q8NBP7 692 aaKnown RBP15.44■□□□□ 0.06
CAPN1-209ENST00000527469 FERMT2Q96AC1 680 aa15.44■□□□□ 0.06
CAPN1-209ENST00000527469 TAAR1Q96RJ0 339 aa15.44■□□□□ 0.06
CAPN1-209ENST00000527469 IWS1Q96ST2 819 aa15.44■□□□□ 0.06
CAPN1-209ENST00000527469 WDR11Q9BZH6 1224 aa15.44■□□□□ 0.06
CAPN1-209ENST00000527469 UPF3BQ9BZI7 483 aaKnown RBP15.44■□□□□ 0.06
CAPN1-209ENST00000527469 TM6SF1Q9BZW5 370 aa15.44■□□□□ 0.06
CAPN1-209ENST00000527469 KATNBL1Q9H079 304 aa15.44■□□□□ 0.06
CAPN1-209ENST00000527469 ZSWIM6Q9HCJ5 1215 aa15.44■□□□□ 0.06
CAPN1-209ENST00000527469 COL6A1P12109 1028 aa15.43■□□□□ 0.06
CAPN1-209ENST00000527469 HSD17B4P51659 736 aa15.43■□□□□ 0.06
CAPN1-209ENST00000527469 AKAP17AQ02040 695 aaKnown RBP15.43■□□□□ 0.06
CAPN1-209ENST00000527469 STXBP2Q15833 593 aa15.43■□□□□ 0.06
CAPN1-209ENST00000527469 GNASQ5JWF2 1037 aa15.43■□□□□ 0.06
CAPN1-209ENST00000527469 TLK2Q86UE8 772 aa15.43■□□□□ 0.06
CAPN1-209ENST00000527469 C7orf61Q8IZ16 206 aa15.43■□□□□ 0.06
CAPN1-209ENST00000527469 SMARCC2Q8TAQ2 1214 aa15.43■□□□□ 0.06
CAPN1-209ENST00000527469 SCFD2Q8WU76 684 aa15.43■□□□□ 0.06
CAPN1-209ENST00000527469 VTI1AQ96AJ9 217 aa15.43■□□□□ 0.06
CAPN1-209ENST00000527469 PDGFCQ9NRA1 345 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms