RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 KRT7P08729 469 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 TMEM191BP0C7N4 346 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 MARCKSP29966 332 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-216ENST00000527467 KRT2P35908 639 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 MAGEA1P43355 309 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 GRAMD1BQ3KR37 738 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 BTN2A1Q7KYR7 527 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 ADCK1Q86TW2 530 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 SMCR8Q8TEV9 937 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-216ENST00000527467 TMX3Q96JJ7 454 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 LBHD1Q9BQE6 289 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-216ENST00000527467 UPF3AQ9H1J1 476 aaKnown RBP7.9□□□□□ -1.14
CTNND1-216ENST00000527467 NEUROG2Q9H2A3 272 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 CCDC85BQ15834 202 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-216ENST00000527467 SESTD1Q86VW0 696 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-216ENST00000527467 FBXL13Q8NEE6 735 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 GIPC2Q8TF65 315 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 MIS12Q9H081 205 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 DNAJC6O75061 913 aa7.9□□□□□ -1.15
CTNND1-216ENST00000527467 KRT14P02533 472 aa7.9□□□□□ -1.15
CTNND1-216ENST00000527467 DDIT3P35638 169 aa7.9□□□□□ -1.15
CTNND1-216ENST00000527467 GARSP41250 739 aaKnown RBP7.9□□□□□ -1.15
CTNND1-216ENST00000527467 BIRC3Q13489 604 aa7.9□□□□□ -1.15
CTNND1-216ENST00000527467 TBCCQ15814 346 aa7.9□□□□□ -1.15
CTNND1-216ENST00000527467 NCAPH2Q6IBW4 605 aa7.9□□□□□ -1.15
CTNND1-216ENST00000527467 SH3GL1Q99961 368 aa7.9□□□□□ -1.15
CTNND1-216ENST00000527467 MIS18AQ9NYP9 233 aa7.9□□□□□ -1.15
CTNND1-216ENST00000527467 IMPACTQ9P2X3 320 aa7.9□□□□□ -1.15
CTNND1-216ENST00000527467 ARIH1Q9Y4X5 557 aaPredicted RBP7.9□□□□□ -1.15
CTNND1-216ENST00000527467 ERBB4Q15303 1308 aa7.9□□□□□ -1.15
CTNND1-216ENST00000527467 INSRP06213 1382 aa7.9□□□□□ -1.15
CTNND1-216ENST00000527467 GOLGA8CPA6NN73 597 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 CHGBP05060 677 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 GUCY2FP51841 1108 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 RWDD2BP57060 319 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 CCNA1P78396 465 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 SEPT2Q15019 361 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 ATP2B3Q16720 1220 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 C6orf118Q5T5N4 469 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 PEX26Q7Z412 305 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 APOBEC3FQ8IUX4 373 aaKnown RBP7.89□□□□□ -1.15
CTNND1-216ENST00000527467 IQUBQ8NA54 791 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 GRK7Q8WTQ7 553 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 TBC1D22AQ8WUA7 517 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 KLHL31Q9H511 634 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 FGFR1OP2Q9NVK5 253 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 CPDO75976 1380 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 KLF18A0A0U1RQI7 1052 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 ZBTB43O43298 467 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 LPXNO60711 386 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 HARSP12081 509 aaKnown RBP7.89□□□□□ -1.15
CTNND1-216ENST00000527467 PHKG2P15735 406 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 DCUN1D2Q6PH85 259 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 TRAF7Q6Q0C0 670 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 PROCA1Q8NCQ7 364 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-216ENST00000527467 DYDC2Q96IM9 177 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 FNBP1Q96RU3 617 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 BRIP1Q9BX63 1249 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 TRIM15Q9C019 465 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 TYW1Q9NV66 732 aaKnown RBP7.89□□□□□ -1.15
CTNND1-216ENST00000527467 INTS9Q9NV88 658 aaKnown RBP7.89□□□□□ -1.15
CTNND1-216ENST00000527467 BABAM1Q9NWV8 329 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 ZMYND8Q9ULU4 1186 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-216ENST00000527467 CHUKO15111 745 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 PPP2R1AP30153 589 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 SERPINB10P48595 397 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 BCL2L12Q9HB09 334 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 RRAGCQ9HB90 399 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 CHCHD3Q9NX63 227 aaKnown RBP7.89□□□□□ -1.15
CTNND1-216ENST00000527467 CAB39Q9Y376 341 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-216ENST00000527467 KAT6BQ8WYB5 2073 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 KIF1AQ12756 1690 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 CEP152O94986 1710 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 TRAF5O00463 557 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 RIMBP2O15034 1052 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 SMARCA5O60264 1052 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-216ENST00000527467 EEF1GP26641 437 aaKnown RBP7.89□□□□□ -1.15
CTNND1-216ENST00000527467 WTAPQ15007 396 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 CEP78Q5JTW2 689 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 CLEC4GQ6UXB4 293 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 PLEKHM3Q6ZWE6 761 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 ZC3H18Q86VM9 953 aaKnown RBP7.89□□□□□ -1.15
CTNND1-216ENST00000527467 RNF169Q8NCN4 708 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 OPTNQ96CV9 577 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 UBAP1Q9NZ09 502 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 PNMA3Q9UL41 463 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 CARMIL3Q8ND23 1372 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 ADAMTS13Q76LX8 1427 aa7.89□□□□□ -1.15
CTNND1-216ENST00000527467 SPAG7O75391 227 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 KIF11P52732 1056 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 GRIN1Q05586 938 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 PSMD2Q13200 908 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 LONRF2Q1L5Z9 754 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 DEFB115Q30KQ5 88 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 GNPTABQ3T906 1256 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 PPP6R3Q5H9R7 873 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 AKNAD1Q5T1N1 836 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 STYK1Q6J9G0 422 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 NECAB1Q8N987 351 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms