RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 DUSP10Q9Y6W6 482 aa13.96□□□□□ -0.18
CAPN1-208ENST00000527323 PP2D1A8MPX8 630 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 ADAMTS3O15072 1205 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 DDAH1O94760 285 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 EEF1GP26641 437 aaKnown RBP13.95□□□□□ -0.18
CAPN1-208ENST00000527323 MAGEA9P43362 315 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 MTIF2P46199 727 aaKnown RBP13.95□□□□□ -0.18
CAPN1-208ENST00000527323 PAPD7Q5XG87 772 aaKnown RBP13.95□□□□□ -0.18
CAPN1-208ENST00000527323 CSGALNACT2Q8N6G5 542 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 RPGRIP1Q96KN7 1286 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 DRC1Q96MC2 740 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 TUBGCP2Q9BSJ2 902 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 NHEJ1Q9H9Q4 299 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-208ENST00000527323 MYH8P13535 1937 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 CNTNAP5Q8WYK1 1306 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 PPFIA4O75335 1185 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 MATR3P43243 847 aaKnown RBP eCLIP13.95□□□□□ -0.184e-6■□□□□ 9.5
CAPN1-208ENST00000527323 C2orf54Q08AI8 447 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 KIF5AQ12840 1032 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 TTC31Q49AM3 519 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-208ENST00000527323 TBC1D16Q8TBP0 767 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 DISC1Q9NRI5 854 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 CENPFP49454 3210 aa13.95□□□□□ -0.18
CAPN1-208ENST00000527323 CCDC194A0A1B0GVG4 234 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 A0A1W2PQC6 194 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 AARSP49588 968 aaKnown RBP eCLIP13.94□□□□□ -0.18
CAPN1-208ENST00000527323 KLK7P49862 253 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 MECOMQ03112 1051 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 UBE4AQ14139 1066 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 SPA17Q15506 151 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 DNAJC21Q5F1R6 531 aaKnown RBP13.94□□□□□ -0.18
CAPN1-208ENST00000527323 PPP4R3CPQ6ZMV5 832 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 GPKOWQ92917 476 aaPredicted RBP eCLIP13.94□□□□□ -0.18
CAPN1-208ENST00000527323 SELENOOQ9BVL4 669 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 EXOC1Q9NV70 894 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 GGA1Q9UJY5 639 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 CCDC96Q2M329 555 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 ARL6IP4Q66PJ3 421 aaKnown RBP13.94□□□□□ -0.18
CAPN1-208ENST00000527323 CCNI2Q6ZMN8 369 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-208ENST00000527323 BLIDQ8IZY5 108 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 FAM76AQ8TAV0 307 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 CCDC42Q96M95 316 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 THAP9Q9H5L6 903 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 EFCC1Q9HA90 598 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 BCORQ6W2J9 1755 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 RCCD1A6NED2 376 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 TSPY2A6NKD2 308 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 CYP2D6P10635 497 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 CALML3P27482 149 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 CACNB3P54284 484 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 IQCEQ6IPM2 695 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 ZNF507Q8TCN5 953 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 RABEP2Q9H5N1 569 aa13.94□□□□□ -0.18
CAPN1-208ENST00000527323 TARSL2A2RTX5 802 aaKnown RBP13.93□□□□□ -0.18
CAPN1-208ENST00000527323 GOLGA6BA6NDN3 693 aa13.93□□□□□ -0.18
CAPN1-208ENST00000527323 PDE2AO00408 941 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-208ENST00000527323 MYBL2P10244 700 aa13.93□□□□□ -0.18
CAPN1-208ENST00000527323 MRPS25P82663 173 aaKnown RBP13.93□□□□□ -0.18
CAPN1-208ENST00000527323 PFKFB3Q16875 520 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-208ENST00000527323 DPP8Q6V1X1 898 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-208ENST00000527323 SECISBP2LQ93073 1101 aaKnown RBP13.93□□□□□ -0.18
CAPN1-208ENST00000527323 CCDC47Q96A33 483 aaKnown RBP13.93□□□□□ -0.18
CAPN1-208ENST00000527323 RIOK1Q9BRS2 568 aaKnown RBP13.93□□□□□ -0.18
CAPN1-208ENST00000527323 BRIP1Q9BX63 1249 aa13.93□□□□□ -0.18
CAPN1-208ENST00000527323 SAP30BPQ9UHR5 308 aaKnown RBP13.93□□□□□ -0.18
CAPN1-208ENST00000527323 RREB1Q92766 1687 aa13.93□□□□□ -0.18
CAPN1-208ENST00000527323 GOLGA6CA6NDK9 693 aa13.93□□□□□ -0.18
CAPN1-208ENST00000527323 H0YIN7 160 aa13.93□□□□□ -0.18
CAPN1-208ENST00000527323 PRPF6O94906 941 aaKnown RBP13.93□□□□□ -0.18
CAPN1-208ENST00000527323 GOLGA6DP0CG33 693 aa13.93□□□□□ -0.18
CAPN1-208ENST00000527323 CRY2Q49AN0 593 aa13.93□□□□□ -0.18
CAPN1-208ENST00000527323 CCDC178Q5BJE1 867 aa13.93□□□□□ -0.18
CAPN1-208ENST00000527323 SND1Q7KZF4 910 aaKnown RBP eCLIP13.93□□□□□ -0.18
CAPN1-208ENST00000527323 GPIHBP1Q8IV16 184 aa13.93□□□□□ -0.18
CAPN1-208ENST00000527323 NOC4LQ9BVI4 516 aaKnown RBP13.93□□□□□ -0.18
CAPN1-208ENST00000527323 NUP58Q9BVL2 599 aa13.93□□□□□ -0.18
CAPN1-208ENST00000527323 GOLGA6AQ9NYA3 693 aa13.93□□□□□ -0.18
CAPN1-208ENST00000527323 LAMB2P55268 1798 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 KIF5BP33176 963 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 IPO4Q8TEX9 1081 aaKnown RBP13.92□□□□□ -0.18
CAPN1-208ENST00000527323 SCN7AQ01118 1682 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 PDS5AQ29RF7 1337 aaKnown RBP13.92□□□□□ -0.18
CAPN1-208ENST00000527323 USO1O60763 962 aaKnown RBP13.92□□□□□ -0.18
CAPN1-208ENST00000527323 CORO7P57737 925 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 ZBED6P86452 979 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 FBXO33Q7Z6M2 555 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 DZIP1Q86YF9 867 aaKnown RBP13.92□□□□□ -0.18
CAPN1-208ENST00000527323 SMCR8Q8TEV9 937 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-208ENST00000527323 PPM1EQ8WY54 764 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 PSMB7Q99436 277 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 DEF6Q9H4E7 631 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 LRWD1Q9UFC0 647 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 PDE4DQ08499 809 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 AOC3Q16853 763 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 KRT26Q7Z3Y9 468 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 CCDC170Q8IYT3 715 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 CD209Q9NNX6 404 aa13.92□□□□□ -0.18
CAPN1-208ENST00000527323 TACC1O75410 805 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 DPEP1P16444 411 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 INF2Q27J81 1249 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms