RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 PLEKHA8P1O95397 391 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 DEXIO95424 95 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 SNHG28P0DPA3 235 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 BMP3P12645 472 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 FDPSP14324 419 aaKnown RBP14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 CCDC96Q2M329 555 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 ZNF792Q3KQV3 632 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 GPATCH4Q5T3I0 446 aaKnown RBP14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 CMTR1Q8N1G2 835 aaKnown RBP14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 STAG2Q8N3U4 1231 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 SRBD1Q8N5C6 995 aaKnown RBP14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 GMCL1Q96IK5 515 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 MMP19Q99542 508 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 TEX13BQ9BXU2 312 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 C11orf49Q9H6J7 331 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 SLC38A10Q9HBR0 1119 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 SLC5A4Q9NY91 659 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 DDX20Q9UHI6 824 aaKnown RBP14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 ISY1Q9ULR0 285 aaKnown RBP14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 DIS3Q9Y2L1 958 aaKnown RBP14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 NR2E3Q9Y5X4 410 aa14.63□□□□□ -0.07
SSSCA1-203ENST00000526877 EVI5O60447 810 aa14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 PGK2P07205 417 aa14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 GOLGA8HP0CJ92 632 aa14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 COPB2P35606 906 aa14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 SLC1A4P43007 532 aa14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 ZNF543Q08ER8 600 aa14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 TRIM29Q14134 588 aa14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 PRAMEF19Q5SWL8 479 aa14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 SNRNP48Q6IEG0 339 aaKnown RBP14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 KIFC2Q96AC6 838 aa14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 ALG1Q9BT22 464 aa14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 PRO3102Q9H379 93 aa14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 GPCPD1Q9NPB8 672 aa14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 BAZ2BQ9UIF8 2168 aaKnown RBP14.62□□□□□ -0.07
SSSCA1-203ENST00000526877 DNAJC25-GNG10A0A024R161 153 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 VPS37CA5D8V6 355 aaPredicted RBP14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 TMEM232C9JQI7 657 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 MSCO60682 206 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 PLA2G6O60733 806 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 ZBED4O75132 1171 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 BRD1O95696 1058 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 XBP1P17861 261 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 CNGA1P29973 690 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 FUT2Q10981 343 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 KCTD2Q14681 263 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 CPXCR1Q8N123 301 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 RGS22Q8NE09 1264 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 C8orf76Q96K31 380 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 SPZ1Q9BXG8 430 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 RAVER2Q9HCJ3 691 aaKnown RBP14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 V9GY48 417 aaPredicted RBP14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 FRMPD2Q68DX3 1309 aaPredicted RBP14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 CNTNAP5Q8WYK1 1306 aa14.61□□□□□ -0.07
SSSCA1-203ENST00000526877 RANBP2P49792 3224 aaKnown RBP14.6□□□□□ -0.07
SSSCA1-203ENST00000526877 ZSCAN22P10073 491 aaPredicted RBP14.6□□□□□ -0.07
SSSCA1-203ENST00000526877 OAZ1P54368 228 aa14.6□□□□□ -0.07
SSSCA1-203ENST00000526877 CHRDL2Q6WN34 429 aa14.6□□□□□ -0.07
SSSCA1-203ENST00000526877 RASGRP2Q7LDG7 609 aa14.6□□□□□ -0.07
SSSCA1-203ENST00000526877 RRP36Q96EU6 259 aaKnown RBP14.6□□□□□ -0.07
SSSCA1-203ENST00000526877 TINF2Q9BSI4 451 aa14.6□□□□□ -0.07
SSSCA1-203ENST00000526877 ZNF536O15090 1300 aa14.6□□□□□ -0.07
SSSCA1-203ENST00000526877 SEPT4O43236 478 aa14.59□□□□□ -0.07
SSSCA1-203ENST00000526877 FDX1P10109 184 aa14.59□□□□□ -0.07
SSSCA1-203ENST00000526877 FOSBP53539 338 aa14.59□□□□□ -0.07
SSSCA1-203ENST00000526877 PKP1Q13835 747 aa14.59□□□□□ -0.07
SSSCA1-203ENST00000526877 KCTD1Q719H9 257 aa14.59□□□□□ -0.07
SSSCA1-203ENST00000526877 FAM160B2Q86V87 743 aa14.59□□□□□ -0.07
SSSCA1-203ENST00000526877 CHURC1Q8WUH1 139 aa14.59□□□□□ -0.07
SSSCA1-203ENST00000526877 UBA5Q9GZZ9 404 aa14.59□□□□□ -0.07
SSSCA1-203ENST00000526877 VAT1LQ9HCJ6 419 aa14.59□□□□□ -0.07
SSSCA1-203ENST00000526877 SEC63Q9UGP8 760 aaKnown RBP14.59□□□□□ -0.07
SSSCA1-203ENST00000526877 NRBP1Q9UHY1 535 aa14.59□□□□□ -0.07
SSSCA1-203ENST00000526877 MTMR6Q9Y217 621 aa14.59□□□□□ -0.07
SSSCA1-203ENST00000526877 SCG2P13521 617 aa14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 TAL1P17542 331 aaPredicted RBP14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 FXR1P51114 621 aaKnown RBP eCLIP14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 STAT2P52630 851 aa14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 IKQ13123 557 aaPredicted RBP14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 FOXD4L5Q5VV16 416 aaPredicted RBP14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 CHST13Q8NET6 341 aa14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 FBXO18Q8NFZ0 1043 aa14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 FOXD4L4Q8WXT5 416 aaPredicted RBP14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 FGD4Q96M96 766 aa14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 RIOX1Q9H6W3 641 aa14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 ZDHHC9Q9Y397 364 aa14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 ATP6V1DQ9Y5K8 247 aa14.58□□□□□ -0.08
SSSCA1-203ENST00000526877 MCM3APO60318 1980 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 hCG_1642624A0A1W2PR95 340 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 DNM1LO00429 736 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 CYTH3O43739 400 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 SNAI1O95863 264 aaPredicted RBP14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 F13A1P00488 732 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 ZNF865P0CJ78 1059 aaPredicted RBP14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 GUCY1B3Q02153 619 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 SAFBQ15424 915 aaKnown RBP eCLIP14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 PKN1Q16512 942 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 PFKFB3Q16875 520 aaPredicted RBP14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 LRRC26Q2I0M4 334 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms