RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 PURBQ96QR8 312 aaKnown RBP13.03□□□□□ -0.32
LINC01001-201ENST00000526704 EIF3CQ99613 913 aaKnown RBP13.03□□□□□ -0.32
LINC01001-201ENST00000526704 RTFDC1Q9BY42 306 aaPredicted RBP13.03□□□□□ -0.32
LINC01001-201ENST00000526704 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
LINC01001-201ENST00000526704 FAN1Q9Y2M0 1017 aa13.03□□□□□ -0.32
LINC01001-201ENST00000526704 KRT86O43790 486 aa13.02□□□□□ -0.32
LINC01001-201ENST00000526704 RPS6KA4O75676 772 aa13.02□□□□□ -0.32
LINC01001-201ENST00000526704 BAG3O95817 575 aa13.02□□□□□ -0.32
LINC01001-201ENST00000526704 MTIF2P46199 727 aaKnown RBP13.02□□□□□ -0.32
LINC01001-201ENST00000526704 TPTE2Q6XPS3 522 aa13.02□□□□□ -0.32
LINC01001-201ENST00000526704 AMIGO3Q86WK7 504 aa13.02□□□□□ -0.32
LINC01001-201ENST00000526704 EHBP1Q8NDI1 1231 aa13.02□□□□□ -0.32
LINC01001-201ENST00000526704 HPS3Q969F9 1004 aa13.02□□□□□ -0.32
LINC01001-201ENST00000526704 LY75O60449 1722 aa13.02□□□□□ -0.33
LINC01001-201ENST00000526704 A0A1W2PQJ5 194 aa13.02□□□□□ -0.33
LINC01001-201ENST00000526704 SMCO2A6NFE2 343 aa13.02□□□□□ -0.33
LINC01001-201ENST00000526704 TULP2O00295 520 aa13.02□□□□□ -0.33
LINC01001-201ENST00000526704 TECP42680 631 aa13.02□□□□□ -0.33
LINC01001-201ENST00000526704 COBLL1Q53SF7 1204 aa13.02□□□□□ -0.33
LINC01001-201ENST00000526704 RC3H1Q5TC82 1133 aaKnown RBP13.02□□□□□ -0.33
LINC01001-201ENST00000526704 NEK8Q86SG6 692 aa13.02□□□□□ -0.33
LINC01001-201ENST00000526704 POTEDQ86YR6 584 aa13.02□□□□□ -0.33
LINC01001-201ENST00000526704 CCDC170Q8IYT3 715 aa13.02□□□□□ -0.33
LINC01001-201ENST00000526704 CCDC47Q96A33 483 aaKnown RBP13.02□□□□□ -0.33
LINC01001-201ENST00000526704 GPR101Q96P66 508 aaPredicted RBP13.02□□□□□ -0.33
LINC01001-201ENST00000526704 ERGIC2Q96RQ1 377 aa13.02□□□□□ -0.33
LINC01001-201ENST00000526704 NOC4LQ9BVI4 516 aaKnown RBP13.02□□□□□ -0.33
LINC01001-201ENST00000526704 ANKIB1Q9P2G1 1089 aa13.02□□□□□ -0.33
LINC01001-201ENST00000526704 GNPATO15228 680 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 ZPR1O75312 459 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 ZSCAN26Q16670 478 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 FIGNQ5HY92 759 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 C16orf86Q6ZW13 317 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 CAPZA3Q96KX2 299 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 EYA3Q99504 573 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 SEMA6BQ9H3T3 888 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 C6orf50Q9HD87 102 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 ZNHIT6Q9NWK9 470 aaKnown RBP13.01□□□□□ -0.33
LINC01001-201ENST00000526704 ZNF263O14978 683 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 CDK8P49336 464 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 IRX5P78411 483 aaPredicted RBP13.01□□□□□ -0.33
LINC01001-201ENST00000526704 CDK17Q00537 523 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 NFIXQ14938 502 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 USP17L2Q6R6M4 530 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 FAM71BQ8TC56 605 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 TBCKQ8TEA7 893 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 DUSP10Q9Y6W6 482 aa13.01□□□□□ -0.33
LINC01001-201ENST00000526704 ATAD5Q96QE3 1844 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 GNA11P29992 359 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 PPP1R2P41236 205 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 CYP27A1Q02318 531 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 SLC20A2Q08357 652 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 RAD51AP2Q09MP3 1159 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 CNNM4Q6P4Q7 775 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 NEDD1Q8NHV4 660 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 RRP36Q96EU6 259 aaKnown RBP13□□□□□ -0.33
LINC01001-201ENST00000526704 PCMTD1Q96MG8 357 aaPredicted RBP13□□□□□ -0.33
LINC01001-201ENST00000526704 LEMD3Q9Y2U8 911 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 ANO9A1A5B4 782 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 TARSL2A2RTX5 802 aaKnown RBP13□□□□□ -0.33
LINC01001-201ENST00000526704 NUTM2BA6NNL0 878 aaPredicted RBP13□□□□□ -0.33
LINC01001-201ENST00000526704 NUTM2EB1AL46 878 aaPredicted RBP13□□□□□ -0.33
LINC01001-201ENST00000526704 PDE2AO00408 941 aaPredicted RBP13□□□□□ -0.33
LINC01001-201ENST00000526704 PLEKP08567 350 aaPredicted RBP13□□□□□ -0.33
LINC01001-201ENST00000526704 BTDP43251 543 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 VAV2P52735 878 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 CKAP4Q07065 602 aaKnown RBP13□□□□□ -0.33
LINC01001-201ENST00000526704 GRB10Q13322 594 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 FAM98CQ17RN3 349 aaKnown RBP13□□□□□ -0.33
LINC01001-201ENST00000526704 GOLGA5Q8TBA6 731 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 PIGSQ96S52 555 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 BLOC1S4Q9NUP1 217 aa13□□□□□ -0.33
LINC01001-201ENST00000526704 MYH4Q9Y623 1939 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 MACROD2A1Z1Q3 448 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 ZNF185O15231 689 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 IPO7O95373 1038 aaKnown RBP12.99□□□□□ -0.33
LINC01001-201ENST00000526704 AMPD3Q01432 767 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 ORC2Q13416 577 aaPredicted RBP12.99□□□□□ -0.33
LINC01001-201ENST00000526704 GRAPQ13588 217 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 CENPPQ6IPU0 288 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 ZNF804AQ7Z570 1209 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 GRAPLQ8TC17 118 aaPredicted RBP12.99□□□□□ -0.33
LINC01001-201ENST00000526704 CCDC102AQ96A19 550 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 RPGRIP1Q96KN7 1286 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 VIPAS39Q9H9C1 493 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 SLC39A2Q9NP94 309 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 TMEM260Q9NX78 707 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 BIN2Q9UBW5 565 aaPredicted RBP12.99□□□□□ -0.33
LINC01001-201ENST00000526704 SEC63Q9UGP8 760 aaKnown RBP12.99□□□□□ -0.33
LINC01001-201ENST00000526704 SIK3Q9Y2K2 1263 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 ZC3H4Q9UPT8 1303 aaKnown RBP12.99□□□□□ -0.33
LINC01001-201ENST00000526704 MYMKA6NI61 221 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 EPHB6O15197 1021 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 LDHCP07864 332 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 IDEP14735 1019 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 AARSP49588 968 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC01001-201ENST00000526704 FKBP15Q5T1M5 1219 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 REXO1Q8N1G1 1221 aaKnown RBP12.99□□□□□ -0.33
LINC01001-201ENST00000526704 CEP95Q96GE4 821 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms