RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 TLK2Q86UE8 772 aa15.65■□□□□ 0.1
USH1C-203ENST00000526181 FBXO11Q86XK2 927 aa15.65■□□□□ 0.1
USH1C-203ENST00000526181 TSEN34Q9BSV6 310 aaKnown RBP15.65■□□□□ 0.1
USH1C-203ENST00000526181 LY9Q9HBG7 655 aa15.65■□□□□ 0.1
USH1C-203ENST00000526181 PRDM5Q9NQX1 630 aaPredicted RBP15.65■□□□□ 0.1
USH1C-203ENST00000526181 COL20A1Q9P218 1284 aa15.65■□□□□ 0.1
USH1C-203ENST00000526181 GNEQ9Y223 722 aaKnown RBP15.65■□□□□ 0.1
USH1C-203ENST00000526181 SMCHD1A6NHR9 2005 aa15.65■□□□□ 0.1
USH1C-203ENST00000526181 MCM3APO60318 1980 aa15.64■□□□□ 0.09
USH1C-203ENST00000526181 MOXD2PA6NHM9 499 aa15.64■□□□□ 0.09
USH1C-203ENST00000526181 OPLAHO14841 1288 aa15.64■□□□□ 0.09
USH1C-203ENST00000526181 CYTH3O43739 400 aa15.64■□□□□ 0.09
USH1C-203ENST00000526181 TLE2Q04725 743 aa15.64■□□□□ 0.09
USH1C-203ENST00000526181 C1orf53Q5VUE5 145 aa15.64■□□□□ 0.09
USH1C-203ENST00000526181 HOMER1Q86YM7 354 aa15.64■□□□□ 0.09
USH1C-203ENST00000526181 NUP133Q8WUM0 1156 aa15.64■□□□□ 0.09
USH1C-203ENST00000526181 MTMR8Q96EF0 704 aa15.64■□□□□ 0.09
USH1C-203ENST00000526181 PIGSQ96S52 555 aa15.64■□□□□ 0.09
USH1C-203ENST00000526181 VTA1Q9NP79 307 aa15.64■□□□□ 0.09
USH1C-203ENST00000526181 STARD7Q9NQZ5 370 aa15.64■□□□□ 0.09
USH1C-203ENST00000526181 SOX1O00570 391 aaPredicted RBP15.63■□□□□ 0.09
USH1C-203ENST00000526181 SH2B2O14492 632 aaPredicted RBP15.63■□□□□ 0.09
USH1C-203ENST00000526181 ZBTB5O15062 677 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 PQBP1O60828 265 aaKnown RBP15.63■□□□□ 0.09
USH1C-203ENST00000526181 EDNRBP24530 442 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 BMP8BP34820 402 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 GNASQ5JWF2 1037 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 CASC1Q6TDU7 716 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 CATIPQ7Z7H3 387 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 ZNF654Q8IZM8 581 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 RGS22Q8NE09 1264 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 SYTL5Q8TDW5 730 aaPredicted RBP15.63■□□□□ 0.09
USH1C-203ENST00000526181 TAAR1Q96RJ0 339 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 AMNQ9BXJ7 453 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 LRRC2Q9BYS8 371 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 UBE2OQ9C0C9 1292 aaKnown RBP15.63■□□□□ 0.09
USH1C-203ENST00000526181 SPC25Q9HBM1 224 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 PDLIM7Q9NR12 457 aa15.63■□□□□ 0.09
USH1C-203ENST00000526181 LTBP2Q14767 1821 aa15.62■□□□□ 0.09
USH1C-203ENST00000526181 TRIM43BA6NCK2 446 aa15.62■□□□□ 0.09
USH1C-203ENST00000526181 DYNC1LI2O43237 492 aaPredicted RBP15.62■□□□□ 0.09
USH1C-203ENST00000526181 NEFLP07196 543 aa15.62■□□□□ 0.09
USH1C-203ENST00000526181 MCM5P33992 734 aa15.62■□□□□ 0.09
USH1C-203ENST00000526181 NKX3-2P78367 333 aa15.62■□□□□ 0.09
USH1C-203ENST00000526181 PDE4DQ08499 809 aa15.62■□□□□ 0.09
USH1C-203ENST00000526181 IQSEC1Q6DN90 963 aa15.62■□□□□ 0.09
USH1C-203ENST00000526181 RAB11FIP4Q86YS3 637 aa15.62■□□□□ 0.09
USH1C-203ENST00000526181 PCSK9Q8NBP7 692 aaKnown RBP15.62■□□□□ 0.09
USH1C-203ENST00000526181 DNERQ8NFT8 737 aa15.62■□□□□ 0.09
USH1C-203ENST00000526181 PIBF1Q8WXW3 757 aa15.62■□□□□ 0.09
USH1C-203ENST00000526181 TRIM43Q96BQ3 446 aaPredicted RBP15.62■□□□□ 0.09
USH1C-203ENST00000526181 RIOX1Q9H6W3 641 aa15.62■□□□□ 0.09
USH1C-203ENST00000526181 PRKAG2Q9UGJ0 569 aa15.62■□□□□ 0.09
USH1C-203ENST00000526181 MRPL11Q9Y3B7 192 aaKnown RBP15.62■□□□□ 0.09
USH1C-203ENST00000526181 LOC102724159A0A0B4J2E5 919 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 A0A1W2PPC1 479 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 CFBP00751 764 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 RXRAP19793 462 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 ITGB8P26012 769 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 PWP2Q15269 919 aaKnown RBP15.61■□□□□ 0.09
USH1C-203ENST00000526181 FSCN1Q16658 493 aaKnown RBP15.61■□□□□ 0.09
USH1C-203ENST00000526181 DUSP28Q4G0W2 176 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 CXCL17Q6UXB2 119 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 NFXL1Q6ZNB6 911 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 MCF2L2Q86YR7 1114 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 GLT1D1Q96MS3 346 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 WDR11Q9BZH6 1224 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 AP5M1Q9H0R1 490 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 PCDHA1Q9Y5I3 950 aa15.61■□□□□ 0.09
USH1C-203ENST00000526181 RBM47A0AV96 593 aaKnown RBP15.6■□□□□ 0.09
USH1C-203ENST00000526181 DDAH1O94760 285 aa15.6■□□□□ 0.09
USH1C-203ENST00000526181 CLTBP09497 229 aa15.6■□□□□ 0.09
USH1C-203ENST00000526181 HSD17B4P51659 736 aa15.6■□□□□ 0.09
USH1C-203ENST00000526181 ADCK5Q3MIX3 580 aa15.6■□□□□ 0.09
USH1C-203ENST00000526181 RASEFQ8IZ41 740 aa15.6■□□□□ 0.09
USH1C-203ENST00000526181 TDHQ8IZJ6 230 aa15.6■□□□□ 0.09
USH1C-203ENST00000526181 BADQ92934 168 aa15.6■□□□□ 0.09
USH1C-203ENST00000526181 TMEM87BQ96K49 555 aa15.6■□□□□ 0.09
USH1C-203ENST00000526181 TCEANC2Q96MN5 208 aa15.6■□□□□ 0.09
USH1C-203ENST00000526181 LBHD1Q9BQE6 289 aaPredicted RBP15.6■□□□□ 0.09
USH1C-203ENST00000526181 MTA3Q9BTC8 594 aa15.6■□□□□ 0.09
USH1C-203ENST00000526181 CCDC69A6NI79 296 aa15.59■□□□□ 0.09
USH1C-203ENST00000526181 ARIH2O95376 493 aa15.59■□□□□ 0.09
USH1C-203ENST00000526181 PLEKHA8P1O95397 391 aa15.59■□□□□ 0.09
USH1C-203ENST00000526181 EIF2AK2P19525 551 aaKnown RBP15.59■□□□□ 0.09
USH1C-203ENST00000526181 HOXA13P31271 388 aaPredicted RBP15.59■□□□□ 0.09
USH1C-203ENST00000526181 FAAP100Q0VG06 881 aa15.59■□□□□ 0.09
USH1C-203ENST00000526181 RNF20Q5VTR2 975 aa15.59■□□□□ 0.09
USH1C-203ENST00000526181 ANKRD33Q7Z3H0 272 aa15.59■□□□□ 0.09
USH1C-203ENST00000526181 CMTR1Q8N1G2 835 aaKnown RBP15.59■□□□□ 0.09
USH1C-203ENST00000526181 CTCFLQ8NI51 663 aaPredicted RBP15.59■□□□□ 0.09
USH1C-203ENST00000526181 NSUN6Q8TEA1 469 aaKnown RBP15.59■□□□□ 0.09
USH1C-203ENST00000526181 COPS5Q92905 334 aa15.59■□□□□ 0.09
USH1C-203ENST00000526181 VTI1AQ96AJ9 217 aa15.59■□□□□ 0.09
USH1C-203ENST00000526181 LRCH3Q96II8 777 aa15.59■□□□□ 0.09
USH1C-203ENST00000526181 RMDN3Q96TC7 470 aa15.59■□□□□ 0.09
USH1C-203ENST00000526181 MPHOSPH6Q99547 160 aaKnown RBP15.59■□□□□ 0.09
USH1C-203ENST00000526181 Q9Y3F1 56 aa15.59■□□□□ 0.09
USH1C-203ENST00000526181 ELP1O95163 1332 aa15.59■□□□□ 0.09
USH1C-203ENST00000526181 PNMA6FA0A0J9YX94 578 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms